RNA–Protein interactions for RNA: ENST00000564354.1

AP000842.3-201, humanhuman

TSL 3 BASIC

Gene AP000842.3, Length 808 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000842.3-201ENST00000564354 LILRA1O75019 489 aa11.76□□□□□ -0.53
AP000842.3-201ENST00000564354 KDF1Q8NAX2 398 aaPredicted RBP11.76□□□□□ -0.53
AP000842.3-201ENST00000564354 PROCA1Q8NCQ7 364 aaPredicted RBP11.76□□□□□ -0.53
AP000842.3-201ENST00000564354 CELA2BP08218 269 aaPredicted RBP11.75□□□□□ -0.53
AP000842.3-201ENST00000564354 SH3D19Q5HYK7 790 aa11.75□□□□□ -0.53
AP000842.3-201ENST00000564354 FBXO31Q5XUX0 539 aaPredicted RBP11.75□□□□□ -0.53
AP000842.3-201ENST00000564354 CUEDC1Q9NWM3 386 aaPredicted RBP11.75□□□□□ -0.53
AP000842.3-201ENST00000564354 ADD1P35611 737 aaKnown RBP11.74□□□□□ -0.53
AP000842.3-201ENST00000564354 PTGIRP43119 386 aa11.74□□□□□ -0.53
AP000842.3-201ENST00000564354 MAP3K10Q02779 954 aa11.74□□□□□ -0.53
AP000842.3-201ENST00000564354 NCAPD3P42695 1498 aa11.74□□□□□ -0.53
AP000842.3-201ENST00000564354 ERVH48-1M5A8F1 160 aa11.72□□□□□ -0.53
AP000842.3-201ENST00000564354 PPP2R2DQ66LE6 453 aa11.72□□□□□ -0.53
AP000842.3-201ENST00000564354 LYSMD3Q7Z3D4 306 aa11.72□□□□□ -0.53
AP000842.3-201ENST00000564354 ESPNB1AK53 854 aa11.7□□□□□ -0.54
AP000842.3-201ENST00000564354 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.7□□□□□ -0.54
AP000842.3-201ENST00000564354 AP1G2O75843 785 aa11.69□□□□□ -0.54
AP000842.3-201ENST00000564354 RAB15P59190 212 aa11.69□□□□□ -0.54
AP000842.3-201ENST00000564354 ENAMQ9NRM1 1142 aa11.69□□□□□ -0.54
AP000842.3-201ENST00000564354 ATAD2BQ9ULI0 1458 aa11.69□□□□□ -0.54
AP000842.3-201ENST00000564354 RNF144AP50876 292 aaPredicted RBP11.68□□□□□ -0.54
AP000842.3-201ENST00000564354 ZNF837Q96EG3 531 aaPredicted RBP11.68□□□□□ -0.54
AP000842.3-201ENST00000564354 GMCL1Q96IK5 515 aa11.68□□□□□ -0.54
AP000842.3-201ENST00000564354 MBIPQ9NS73 344 aa11.68□□□□□ -0.54
AP000842.3-201ENST00000564354 NEUROD2Q15784 382 aa11.67□□□□□ -0.54
AP000842.3-201ENST00000564354 DZIP3Q86Y13 1208 aaKnown RBP11.67□□□□□ -0.54
AP000842.3-201ENST00000564354 EPS8L1Q8TE68 723 aa11.67□□□□□ -0.54
AP000842.3-201ENST00000564354 NESP48681 1621 aa11.67□□□□□ -0.54
AP000842.3-201ENST00000564354 TRIM22Q8IYM9 498 aa11.66□□□□□ -0.54
AP000842.3-201ENST00000564354 SMARCA2P51531 1590 aa11.66□□□□□ -0.54
AP000842.3-201ENST00000564354 SEPT12Q8IYM1 358 aa11.65□□□□□ -0.54
AP000842.3-201ENST00000564354 PNMA1Q8ND90 353 aa11.65□□□□□ -0.54
AP000842.3-201ENST00000564354 PHF20L1A8MW92 1017 aa11.64□□□□□ -0.55
AP000842.3-201ENST00000564354 PLA2G4EQ3MJ16 856 aa11.64□□□□□ -0.55
AP000842.3-201ENST00000564354 PRICKLE2Q7Z3G6 844 aa11.64□□□□□ -0.55
AP000842.3-201ENST00000564354 RHOQP17081 205 aa11.63□□□□□ -0.55
AP000842.3-201ENST00000564354 IL27Q8NEV9 243 aa11.63□□□□□ -0.55
AP000842.3-201ENST00000564354 DCAF5Q96JK2 942 aa11.63□□□□□ -0.55
AP000842.3-201ENST00000564354 HMX1Q9NP08 348 aaPredicted RBP11.63□□□□□ -0.55
AP000842.3-201ENST00000564354 IGF1RP08069 1367 aa11.63□□□□□ -0.55
AP000842.3-201ENST00000564354 HMGXB3Q12766 1538 aa11.62□□□□□ -0.55
AP000842.3-201ENST00000564354 SMARCA4P51532 1647 aa11.62□□□□□ -0.55
AP000842.3-201ENST00000564354 MSTNO14793 375 aa11.62□□□□□ -0.55
AP000842.3-201ENST00000564354 CYLDQ9NQC7 956 aa11.62□□□□□ -0.55
AP000842.3-201ENST00000564354 CNTNAP5Q8WYK1 1306 aa11.61□□□□□ -0.55
AP000842.3-201ENST00000564354 ITGB2P05107 769 aa11.61□□□□□ -0.55
AP000842.3-201ENST00000564354 GPC1P35052 558 aa11.61□□□□□ -0.55
AP000842.3-201ENST00000564354 DBN1Q16643 649 aa11.61□□□□□ -0.55
AP000842.3-201ENST00000564354 TRIM52Q96A61 297 aa11.61□□□□□ -0.55
AP000842.3-201ENST00000564354 PCMTD1Q96MG8 357 aaPredicted RBP11.61□□□□□ -0.55
AP000842.3-201ENST00000564354 BAZ1BQ9UIG0 1483 aaKnown RBP11.6□□□□□ -0.55
AP000842.3-201ENST00000564354 GPR25O00155 361 aa11.6□□□□□ -0.55
AP000842.3-201ENST00000564354 BCRP11274 1271 aa11.6□□□□□ -0.55
AP000842.3-201ENST00000564354 FOXR1Q6PIV2 292 aa11.6□□□□□ -0.55
AP000842.3-201ENST00000564354 ADAM23O75077 832 aa11.59□□□□□ -0.55
AP000842.3-201ENST00000564354 USP17L8P0C7I0 530 aa11.59□□□□□ -0.55
AP000842.3-201ENST00000564354 BEND7Q8N7W2 519 aaPredicted RBP11.59□□□□□ -0.55
AP000842.3-201ENST00000564354 SPOCK3Q9BQ16 436 aa11.59□□□□□ -0.55
AP000842.3-201ENST00000564354 ATP5J2-PTCD1G3V325 749 aa11.58□□□□□ -0.56
AP000842.3-201ENST00000564354 ACDQ96AP0 544 aa11.58□□□□□ -0.56
AP000842.3-201ENST00000564354 DYRK1BQ9Y463 629 aa11.58□□□□□ -0.56
AP000842.3-201ENST00000564354 RFC5P40937 340 aa11.57□□□□□ -0.56
AP000842.3-201ENST00000564354 LRRC4BQ9NT99 713 aa11.57□□□□□ -0.56
AP000842.3-201ENST00000564354 H7C1W4 665 aa11.56□□□□□ -0.56
AP000842.3-201ENST00000564354 RIPOR1Q6ZS17 1223 aa11.56□□□□□ -0.56
AP000842.3-201ENST00000564354 PODNQ7Z5L7 613 aa11.56□□□□□ -0.56
AP000842.3-201ENST00000564354 NEDD1Q8NHV4 660 aa11.56□□□□□ -0.56
AP000842.3-201ENST00000564354 PROCP04070 461 aa11.55□□□□□ -0.56
AP000842.3-201ENST00000564354 XP32Q5T750 250 aa11.55□□□□□ -0.56
AP000842.3-201ENST00000564354 THOC2Q8NI27 1593 aaKnown RBP11.54□□□□□ -0.56
AP000842.3-201ENST00000564354 GTPBP3Q969Y2 492 aaKnown RBP11.54□□□□□ -0.56
AP000842.3-201ENST00000564354 BAZ1AQ9NRL2 1556 aaPredicted RBP11.54□□□□□ -0.56
AP000842.3-201ENST00000564354 LAMC3Q9Y6N6 1575 aa11.54□□□□□ -0.56
AP000842.3-201ENST00000564354 A0A1W2PRU2 124 aa11.53□□□□□ -0.56
AP000842.3-201ENST00000564354 MEN1O00255 615 aa11.53□□□□□ -0.56
AP000842.3-201ENST00000564354 TPRNQ4KMQ1 711 aa11.53□□□□□ -0.56
AP000842.3-201ENST00000564354 TRERF1Q96PN7 1200 aa11.53□□□□□ -0.56
AP000842.3-201ENST00000564354 CCDC125Q86Z20 511 aa11.52□□□□□ -0.57
AP000842.3-201ENST00000564354 GOPCQ9HD26 462 aa11.52□□□□□ -0.57
AP000842.3-201ENST00000564354 PDS5BQ9NTI5 1447 aa11.52□□□□□ -0.57
AP000842.3-201ENST00000564354 GIGYF1O75420 1035 aaPredicted RBP11.51□□□□□ -0.57
AP000842.3-201ENST00000564354 BRPF1P55201 1214 aaPredicted RBP11.51□□□□□ -0.57
AP000842.3-201ENST00000564354 ERVK-9P63128 1117 aa11.51□□□□□ -0.57
AP000842.3-201ENST00000564354 POU4F2Q12837 409 aa11.51□□□□□ -0.57
AP000842.3-201ENST00000564354 TRIM34Q9BYJ4 488 aa11.51□□□□□ -0.57
AP000842.3-201ENST00000564354 GRIP2Q9C0E4 1043 aa11.51□□□□□ -0.57
AP000842.3-201ENST00000564354 KIF21AQ7Z4S6 1674 aa11.51□□□□□ -0.57
AP000842.3-201ENST00000564354 GAS2L1Q99501 681 aaPredicted RBP11.5□□□□□ -0.57
AP000842.3-201ENST00000564354 OIP5O43482 229 aa11.49□□□□□ -0.57
AP000842.3-201ENST00000564354 MX2P20592 715 aa11.49□□□□□ -0.57
AP000842.3-201ENST00000564354 TMEM259Q4ZIN3 620 aa11.49□□□□□ -0.57
AP000842.3-201ENST00000564354 WDR44Q5JSH3 913 aa11.49□□□□□ -0.57
AP000842.3-201ENST00000564354 CC2D2BQ6DHV5 1058 aa11.49□□□□□ -0.57
AP000842.3-201ENST00000564354 NBPF10Q6P3W6 841 aaKnown RBP11.49□□□□□ -0.57
AP000842.3-201ENST00000564354 NBPF15Q8N660 670 aa11.49□□□□□ -0.57
AP000842.3-201ENST00000564354 NSFL1CQ9UNZ2 370 aaKnown RBP11.49□□□□□ -0.57
AP000842.3-201ENST00000564354 ZBBXA8MT70 800 aa11.48□□□□□ -0.57
AP000842.3-201ENST00000564354 SPATA31C2B4DYI2 1134 aa11.48□□□□□ -0.57
AP000842.3-201ENST00000564354 SLC27A3Q5K4L6 730 aa11.48□□□□□ -0.57
AP000842.3-201ENST00000564354 CLN3Q13286 438 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms