RNA–Protein interactions for RNA: ENST00000563781.5

HERPUD1-207, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 774 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-207ENST00000563781 LRCH3Q96II8 777 aa7.48□□□□□ -1.21
HERPUD1-207ENST00000563781 GPBP1L1Q9HC44 474 aaPredicted RBP7.48□□□□□ -1.21
HERPUD1-207ENST00000563781 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.48□□□□□ -1.21
HERPUD1-207ENST00000563781 KIF1BO60333 1816 aa7.48□□□□□ -1.21
HERPUD1-207ENST00000563781 MYO5BQ9ULV0 1848 aa7.48□□□□□ -1.21
HERPUD1-207ENST00000563781 PLEKHG1Q9ULL1 1385 aa7.47□□□□□ -1.21
HERPUD1-207ENST00000563781 IFT172Q9UG01 1749 aa7.47□□□□□ -1.21
HERPUD1-207ENST00000563781 SSTR3P32745 418 aaPredicted RBP7.47□□□□□ -1.21
HERPUD1-207ENST00000563781 TXNDC2Q86VQ3 553 aa7.47□□□□□ -1.21
HERPUD1-207ENST00000563781 ANKLE2Q86XL3 938 aa7.47□□□□□ -1.21
HERPUD1-207ENST00000563781 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.47□□□□□ -1.21
HERPUD1-207ENST00000563781 KCTD12Q96CX2 325 aaKnown RBP7.47□□□□□ -1.21
HERPUD1-207ENST00000563781 ZMYND15Q9H091 742 aa7.47□□□□□ -1.21
HERPUD1-207ENST00000563781 FAM217BQ9NTX9 383 aaPredicted RBP7.47□□□□□ -1.21
HERPUD1-207ENST00000563781 MED14O60244 1454 aa7.47□□□□□ -1.21
HERPUD1-207ENST00000563781 DISP3Q9P2K9 1392 aa7.46□□□□□ -1.21
HERPUD1-207ENST00000563781 PIK3C2GO75747 1445 aa7.46□□□□□ -1.21
HERPUD1-207ENST00000563781 ADAMTS13Q76LX8 1427 aa7.46□□□□□ -1.21
HERPUD1-207ENST00000563781 PRAG1Q86YV5 1406 aa7.46□□□□□ -1.21
HERPUD1-207ENST00000563781 SLC10A3P09131 477 aa7.46□□□□□ -1.22
HERPUD1-207ENST00000563781 BCAMP50895 628 aa7.46□□□□□ -1.22
HERPUD1-207ENST00000563781 THSD4Q6ZMP0 1018 aa7.46□□□□□ -1.22
HERPUD1-207ENST00000563781 DCAF11Q8TEB1 546 aa7.46□□□□□ -1.22
HERPUD1-207ENST00000563781 RSPH6AQ9H0K4 717 aa7.46□□□□□ -1.22
HERPUD1-207ENST00000563781 KDM4CQ9H3R0 1056 aa7.46□□□□□ -1.22
HERPUD1-207ENST00000563781 PPLO60437 1756 aa7.46□□□□□ -1.22
HERPUD1-207ENST00000563781 SETBP1Q9Y6X0 1596 aa7.46□□□□□ -1.22
HERPUD1-207ENST00000563781 NPHP4O75161 1426 aaPredicted RBP7.45□□□□□ -1.22
HERPUD1-207ENST00000563781 DDX11L8A8MPP1 907 aa7.45□□□□□ -1.22
HERPUD1-207ENST00000563781 PPP1R15AO75807 674 aaPredicted RBP7.45□□□□□ -1.22
HERPUD1-207ENST00000563781 MS4A1P11836 297 aa7.45□□□□□ -1.22
HERPUD1-207ENST00000563781 SLC4A3P48751 1232 aa7.45□□□□□ -1.22
HERPUD1-207ENST00000563781 NBPF8Q3BBV2 869 aa7.45□□□□□ -1.22
HERPUD1-207ENST00000563781 SULF1Q8IWU6 871 aa7.45□□□□□ -1.22
HERPUD1-207ENST00000563781 EID1Q9Y6B2 187 aa7.45□□□□□ -1.22
HERPUD1-207ENST00000563781 NRXN3Q9Y4C0 1643 aa7.45□□□□□ -1.22
HERPUD1-207ENST00000563781 CD46P15529 392 aa7.44□□□□□ -1.22
HERPUD1-207ENST00000563781 TSR3Q9UJK0 312 aaKnown RBP7.44□□□□□ -1.22
HERPUD1-207ENST00000563781 STRCQ7RTU9 1775 aa7.43□□□□□ -1.22
HERPUD1-207ENST00000563781 ASXL1Q8IXJ9 1541 aa7.43□□□□□ -1.22
HERPUD1-207ENST00000563781 RNF40O75150 1001 aa7.43□□□□□ -1.22
HERPUD1-207ENST00000563781 PPP4CP60510 307 aa7.43□□□□□ -1.22
HERPUD1-207ENST00000563781 MMRN1Q13201 1228 aa7.43□□□□□ -1.22
HERPUD1-207ENST00000563781 CFAP70Q5T0N1 1121 aa7.43□□□□□ -1.22
HERPUD1-207ENST00000563781 RNF166Q96A37 237 aaPredicted RBP7.43□□□□□ -1.22
HERPUD1-207ENST00000563781 C14orf93Q9H972 538 aaKnown RBP7.43□□□□□ -1.22
HERPUD1-207ENST00000563781 HPS5Q9UPZ3 1129 aa7.43□□□□□ -1.22
HERPUD1-207ENST00000563781 ADGRB1O14514 1584 aa7.42□□□□□ -1.22
HERPUD1-207ENST00000563781 ALKQ9UM73 1620 aa7.42□□□□□ -1.22
HERPUD1-207ENST00000563781 IQGAP1P46940 1657 aa7.42□□□□□ -1.22
HERPUD1-207ENST00000563781 POLR1AO95602 1720 aaPredicted RBP7.42□□□□□ -1.22
HERPUD1-207ENST00000563781 RDH13Q8NBN7 331 aa7.42□□□□□ -1.22
HERPUD1-207ENST00000563781 SLC26A8Q96RN1 970 aa7.42□□□□□ -1.22
HERPUD1-207ENST00000563781 TBX22Q9Y458 520 aa7.42□□□□□ -1.22
HERPUD1-207ENST00000563781 METP08581 1390 aa7.42□□□□□ -1.22
HERPUD1-207ENST00000563781 GPRASP1Q5JY77 1395 aa7.42□□□□□ -1.22
HERPUD1-207ENST00000563781 RALGAPBQ86X10 1494 aa7.42□□□□□ -1.22
HERPUD1-207ENST00000563781 DIP2AQ14689 1571 aa7.42□□□□□ -1.22
HERPUD1-207ENST00000563781 SETD1AO15047 1707 aaKnown RBP7.41□□□□□ -1.22
HERPUD1-207ENST00000563781 GCGRP47871 477 aa7.41□□□□□ -1.22
HERPUD1-207ENST00000563781 NBPF1Q3BBV0 1214 aa7.41□□□□□ -1.22
HERPUD1-207ENST00000563781 NPM2Q86SE8 214 aaKnown RBP7.41□□□□□ -1.22
HERPUD1-207ENST00000563781 NECTIN2Q92692 538 aa7.41□□□□□ -1.22
HERPUD1-207ENST00000563781 WBP1LQ9NX94 342 aa7.41□□□□□ -1.22
HERPUD1-207ENST00000563781 PTPRUQ92729 1446 aa7.41□□□□□ -1.22
HERPUD1-207ENST00000563781 PTPN5P54829 565 aa7.4□□□□□ -1.22
HERPUD1-207ENST00000563781 TMEM132EQ6IEE7 984 aa7.4□□□□□ -1.22
HERPUD1-207ENST00000563781 BEGAINQ9BUH8 593 aa7.4□□□□□ -1.22
HERPUD1-207ENST00000563781 FAM117AQ9C073 453 aa7.4□□□□□ -1.22
HERPUD1-207ENST00000563781 PIK3R4Q99570 1358 aa7.4□□□□□ -1.22
HERPUD1-207ENST00000563781 LAMC1P11047 1609 aa7.39□□□□□ -1.23
HERPUD1-207ENST00000563781 TRPM1Q7Z4N2 1603 aa7.39□□□□□ -1.23
HERPUD1-207ENST00000563781 LRPPRCP42704 1394 aaKnown RBP7.39□□□□□ -1.23
HERPUD1-207ENST00000563781 KIAA1210Q9ULL0 1709 aa7.38□□□□□ -1.23
HERPUD1-207ENST00000563781 NWD1Q149M9 1564 aa7.38□□□□□ -1.23
HERPUD1-207ENST00000563781 TECPR2O15040 1411 aa7.38□□□□□ -1.23
HERPUD1-207ENST00000563781 YTHDC2Q9H6S0 1430 aaKnown RBP7.38□□□□□ -1.23
HERPUD1-207ENST00000563781 CFHP08603 1231 aa7.38□□□□□ -1.23
HERPUD1-207ENST00000563781 APLP1P51693 650 aa7.38□□□□□ -1.23
HERPUD1-207ENST00000563781 NYAP1Q6ZVC0 841 aa7.38□□□□□ -1.23
HERPUD1-207ENST00000563781 ROCK2O75116 1388 aaKnown RBP7.37□□□□□ -1.23
HERPUD1-207ENST00000563781 ABCC11Q96J66 1382 aa7.37□□□□□ -1.23
HERPUD1-207ENST00000563781 ZNF335Q9H4Z2 1342 aaPredicted RBP7.37□□□□□ -1.23
HERPUD1-207ENST00000563781 PLEKHG3A1L390 1219 aa7.37□□□□□ -1.23
HERPUD1-207ENST00000563781 ACTN4O43707 911 aaKnown RBP7.37□□□□□ -1.23
HERPUD1-207ENST00000563781 ZEB1P37275 1124 aaPredicted RBP7.37□□□□□ -1.23
HERPUD1-207ENST00000563781 KMT5BQ4FZB7 885 aa7.37□□□□□ -1.23
HERPUD1-207ENST00000563781 DDRGK1Q96HY6 314 aa7.37□□□□□ -1.23
HERPUD1-207ENST00000563781 HCSTQ9UBK5 93 aa7.37□□□□□ -1.23
HERPUD1-207ENST00000563781 XRN1Q8IZH2 1706 aaKnown RBP7.37□□□□□ -1.23
HERPUD1-207ENST00000563781 PTCH1Q13635 1447 aa7.36□□□□□ -1.23
HERPUD1-207ENST00000563781 ROBO2Q9HCK4 1378 aa7.36□□□□□ -1.23
HERPUD1-207ENST00000563781 KDM4AO75164 1064 aa7.36□□□□□ -1.23
HERPUD1-207ENST00000563781 KCNA6P17658 529 aa7.36□□□□□ -1.23
HERPUD1-207ENST00000563781 IL27Q8NEV9 243 aa7.36□□□□□ -1.23
HERPUD1-207ENST00000563781 SPIRE2Q8WWL2 714 aa7.36□□□□□ -1.23
HERPUD1-207ENST00000563781 PRR14Q9BWN1 585 aa7.36□□□□□ -1.23
HERPUD1-207ENST00000563781 CARD11Q9BXL7 1154 aa7.36□□□□□ -1.23
HERPUD1-207ENST00000563781 STK26Q9P289 416 aa7.36□□□□□ -1.23
HERPUD1-207ENST00000563781 AMOTL2Q9Y2J4 779 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms