RNA–Protein interactions for RNA: ENST00000560842.1

PSMA4-221, Transcript of proteasome subunit alpha 4, humanhuman

TSL 1 (best)

Gene PSMA4, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-221ENST00000560842 GMCL1Q96IK5 515 aa9.91□□□□□ -0.82
PSMA4-221ENST00000560842 CNTNAP5Q8WYK1 1306 aa9.9□□□□□ -0.82
PSMA4-221ENST00000560842 ERVH48-1M5A8F1 160 aa9.9□□□□□ -0.82
PSMA4-221ENST00000560842 DCAF5Q96JK2 942 aa9.9□□□□□ -0.82
PSMA4-221ENST00000560842 MBIPQ9NS73 344 aa9.9□□□□□ -0.82
PSMA4-221ENST00000560842 ADAM23O75077 832 aa9.89□□□□□ -0.83
PSMA4-221ENST00000560842 RNF144AP50876 292 aaPredicted RBP9.89□□□□□ -0.83
PSMA4-221ENST00000560842 SKIV2LQ15477 1246 aaKnown RBP9.89□□□□□ -0.83
PSMA4-221ENST00000560842 BEND7Q8N7W2 519 aaPredicted RBP9.89□□□□□ -0.83
PSMA4-221ENST00000560842 ITGB2P05107 769 aa9.88□□□□□ -0.83
PSMA4-221ENST00000560842 RAB15P59190 212 aa9.88□□□□□ -0.83
PSMA4-221ENST00000560842 XP32Q5T750 250 aa9.88□□□□□ -0.83
PSMA4-221ENST00000560842 FBXO31Q5XUX0 539 aaPredicted RBP9.88□□□□□ -0.83
PSMA4-221ENST00000560842 TRIM22Q8IYM9 498 aa9.88□□□□□ -0.83
PSMA4-221ENST00000560842 ZNF837Q96EG3 531 aaPredicted RBP9.88□□□□□ -0.83
PSMA4-221ENST00000560842 SPOCK3Q9BQ16 436 aa9.88□□□□□ -0.83
PSMA4-221ENST00000560842 ESPNB1AK53 854 aa9.87□□□□□ -0.83
PSMA4-221ENST00000560842 TMEM132AQ24JP5 1023 aa9.87□□□□□ -0.83
PSMA4-221ENST00000560842 PPP2R2DQ66LE6 453 aa9.87□□□□□ -0.83
PSMA4-221ENST00000560842 PRICKLE2Q7Z3G6 844 aa9.87□□□□□ -0.83
PSMA4-221ENST00000560842 IGF1RP08069 1367 aa9.87□□□□□ -0.83
PSMA4-221ENST00000560842 BCRP11274 1271 aa9.86□□□□□ -0.83
PSMA4-221ENST00000560842 FOXR1Q6PIV2 292 aa9.86□□□□□ -0.83
PSMA4-221ENST00000560842 DZIP3Q86Y13 1208 aaKnown RBP9.86□□□□□ -0.83
PSMA4-221ENST00000560842 RHOQP17081 205 aa9.85□□□□□ -0.83
PSMA4-221ENST00000560842 DBN1Q16643 649 aa9.85□□□□□ -0.83
PSMA4-221ENST00000560842 GPR25O00155 361 aa9.84□□□□□ -0.83
PSMA4-221ENST00000560842 PODNQ7Z5L7 613 aa9.84□□□□□ -0.83
PSMA4-221ENST00000560842 SEPT12Q8IYM1 358 aa9.83□□□□□ -0.84
PSMA4-221ENST00000560842 PNMA1Q8ND90 353 aa9.83□□□□□ -0.84
PSMA4-221ENST00000560842 NEDD1Q8NHV4 660 aa9.83□□□□□ -0.84
PSMA4-221ENST00000560842 EPS8L1Q8TE68 723 aa9.83□□□□□ -0.84
PSMA4-221ENST00000560842 TRIM52Q96A61 297 aa9.83□□□□□ -0.84
PSMA4-221ENST00000560842 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.83□□□□□ -0.84
PSMA4-221ENST00000560842 LRRC4BQ9NT99 713 aa9.83□□□□□ -0.84
PSMA4-221ENST00000560842 PROCP04070 461 aa9.82□□□□□ -0.84
PSMA4-221ENST00000560842 GPC1P35052 558 aa9.82□□□□□ -0.84
PSMA4-221ENST00000560842 ACDQ96AP0 544 aa9.82□□□□□ -0.84
PSMA4-221ENST00000560842 H7C1W4 665 aa9.81□□□□□ -0.84
PSMA4-221ENST00000560842 RIPOR1Q6ZS17 1223 aa9.81□□□□□ -0.84
PSMA4-221ENST00000560842 PROCA1Q8NCQ7 364 aaPredicted RBP9.81□□□□□ -0.84
PSMA4-221ENST00000560842 CYLDQ9NQC7 956 aa9.81□□□□□ -0.84
PSMA4-221ENST00000560842 DYRK1BQ9Y463 629 aa9.81□□□□□ -0.84
PSMA4-221ENST00000560842 AP1G2O75843 785 aa9.8□□□□□ -0.84
PSMA4-221ENST00000560842 ATP5J2-PTCD1G3V325 749 aa9.79□□□□□ -0.84
PSMA4-221ENST00000560842 GTPBP3Q969Y2 492 aaKnown RBP9.79□□□□□ -0.84
PSMA4-221ENST00000560842 TRERF1Q96PN7 1200 aa9.78□□□□□ -0.84
PSMA4-221ENST00000560842 GALNT6Q8NCL4 622 aa9.77□□□□□ -0.85
PSMA4-221ENST00000560842 PCMTD1Q96MG8 357 aaPredicted RBP9.77□□□□□ -0.85
PSMA4-221ENST00000560842 HMX1Q9NP08 348 aaPredicted RBP9.77□□□□□ -0.85
PSMA4-221ENST00000560842 A0A1W2PRU2 124 aa9.76□□□□□ -0.85
PSMA4-221ENST00000560842 POU4F2Q12837 409 aa9.76□□□□□ -0.85
PSMA4-221ENST00000560842 NSFL1CQ9UNZ2 370 aaKnown RBP9.76□□□□□ -0.85
PSMA4-221ENST00000560842 MEN1O00255 615 aa9.75□□□□□ -0.85
PSMA4-221ENST00000560842 OIP5O43482 229 aa9.75□□□□□ -0.85
PSMA4-221ENST00000560842 MX2P20592 715 aa9.75□□□□□ -0.85
PSMA4-221ENST00000560842 GAS2L1Q99501 681 aaPredicted RBP9.75□□□□□ -0.85
PSMA4-221ENST00000560842 GRIP2Q9C0E4 1043 aa9.74□□□□□ -0.85
PSMA4-221ENST00000560842 GIGYF1O75420 1035 aaPredicted RBP9.73□□□□□ -0.85
PSMA4-221ENST00000560842 USP17L8P0C7I0 530 aa9.73□□□□□ -0.85
PSMA4-221ENST00000560842 WDR44Q5JSH3 913 aa9.73□□□□□ -0.85
PSMA4-221ENST00000560842 CCDC125Q86Z20 511 aa9.73□□□□□ -0.85
PSMA4-221ENST00000560842 ATP1B4Q9UN42 357 aaPredicted RBP9.73□□□□□ -0.85
PSMA4-221ENST00000560842 K7ELQ4 463 aaPredicted RBP9.72□□□□□ -0.85
PSMA4-221ENST00000560842 SLC27A3Q5K4L6 730 aa9.72□□□□□ -0.85
PSMA4-221ENST00000560842 NBPF10Q6P3W6 841 aaKnown RBP9.72□□□□□ -0.85
PSMA4-221ENST00000560842 NBPF15Q8N660 670 aa9.72□□□□□ -0.85
PSMA4-221ENST00000560842 KRBA1A5PL33 1030 aa9.71□□□□□ -0.86
PSMA4-221ENST00000560842 SPATA31C2B4DYI2 1134 aa9.71□□□□□ -0.86
PSMA4-221ENST00000560842 ERVK-9P63128 1117 aa9.71□□□□□ -0.86
PSMA4-221ENST00000560842 SNRPNP63162 240 aaKnown RBP9.71□□□□□ -0.86
PSMA4-221ENST00000560842 NLRP3Q96P20 1036 aa9.71□□□□□ -0.86
PSMA4-221ENST00000560842 BAG6P46379 1132 aa9.7□□□□□ -0.86
PSMA4-221ENST00000560842 MAP2K3P46734 347 aa9.7□□□□□ -0.86
PSMA4-221ENST00000560842 CC2D2BQ6DHV5 1058 aa9.7□□□□□ -0.86
PSMA4-221ENST00000560842 OXCT2Q9BYC2 517 aaPredicted RBP9.7□□□□□ -0.86
PSMA4-221ENST00000560842 NUCKS1Q9H1E3 243 aaKnown RBP9.7□□□□□ -0.86
PSMA4-221ENST00000560842 F11P03951 625 aa9.69□□□□□ -0.86
PSMA4-221ENST00000560842 ALYREFQ86V81 257 aaKnown RBP9.69□□□□□ -0.86
PSMA4-221ENST00000560842 CFHR5Q9BXR6 569 aa9.69□□□□□ -0.86
PSMA4-221ENST00000560842 RFC5P40937 340 aa9.68□□□□□ -0.86
PSMA4-221ENST00000560842 CLN3Q13286 438 aa9.68□□□□□ -0.86
PSMA4-221ENST00000560842 TIMMDC1Q9NPL8 285 aa9.68□□□□□ -0.86
PSMA4-221ENST00000560842 ZBBXA8MT70 800 aa9.67□□□□□ -0.86
PSMA4-221ENST00000560842 TRIM34Q9BYJ4 488 aa9.67□□□□□ -0.86
PSMA4-221ENST00000560842 MKL2Q9ULH7 1088 aa9.67□□□□□ -0.86
PSMA4-221ENST00000560842 SHISA8B8ZZ34 492 aa9.66□□□□□ -0.86
PSMA4-221ENST00000560842 WASLO00401 505 aaPredicted RBP9.66□□□□□ -0.86
PSMA4-221ENST00000560842 TAS1R3Q7RTX0 852 aa9.66□□□□□ -0.86
PSMA4-221ENST00000560842 CYP2U1Q7Z449 544 aa9.66□□□□□ -0.86
PSMA4-221ENST00000560842 PCDHB9Q9Y5E1 797 aa9.66□□□□□ -0.86
PSMA4-221ENST00000560842 THBS1P07996 1170 aa9.65□□□□□ -0.86
PSMA4-221ENST00000560842 TMEM259Q4ZIN3 620 aa9.65□□□□□ -0.86
PSMA4-221ENST00000560842 RNF20Q5VTR2 975 aa9.65□□□□□ -0.86
PSMA4-221ENST00000560842 C1orf229Q6ZS94 237 aaPredicted RBP9.65□□□□□ -0.86
PSMA4-221ENST00000560842 KLRG1Q96E93 195 aa9.65□□□□□ -0.86
PSMA4-221ENST00000560842 KRTAP4-8Q9BYQ9 185 aa9.65□□□□□ -0.86
PSMA4-221ENST00000560842 COL8A1P27658 744 aa9.64□□□□□ -0.87
PSMA4-221ENST00000560842 Q8N3U1 123 aa9.64□□□□□ -0.87
PSMA4-221ENST00000560842 TRAK2O60296 914 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms