RNA–Protein interactions for RNA: ENST00000559037.1

CASC4-207, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 680 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-207ENST00000559037 FGD5Q6ZNL6 1462 aa8.7□□□□□ -1.02
CASC4-207ENST00000559037 GIGYF1O75420 1035 aaPredicted RBP8.7□□□□□ -1.02
CASC4-207ENST00000559037 SEMA3FQ13275 785 aa8.7□□□□□ -1.02
CASC4-207ENST00000559037 CEP126Q9P2H0 1117 aa8.7□□□□□ -1.02
CASC4-207ENST00000559037 A6NJR5 290 aa8.69□□□□□ -1.02
CASC4-207ENST00000559037 TRIM46Q7Z4K8 759 aa8.69□□□□□ -1.02
CASC4-207ENST00000559037 POM121Q96HA1 1249 aa8.69□□□□□ -1.02
CASC4-207ENST00000559037 GMPR2Q9P2T1 348 aaKnown RBP8.69□□□□□ -1.02
CASC4-207ENST00000559037 DACH1Q9UI36 760 aa8.69□□□□□ -1.02
CASC4-207ENST00000559037 TDRD9Q8NDG6 1382 aaKnown RBP8.69□□□□□ -1.02
CASC4-207ENST00000559037 WDR97A6NE52 1622 aa8.69□□□□□ -1.02
CASC4-207ENST00000559037 SLFNL1Q499Z3 407 aa8.68□□□□□ -1.02
CASC4-207ENST00000559037 LINC00528Q8N1L1 170 aa8.68□□□□□ -1.02
CASC4-207ENST00000559037 ZNF784Q8NCA9 323 aaPredicted RBP8.68□□□□□ -1.02
CASC4-207ENST00000559037 C11orf95C9JLR9 678 aaPredicted RBP8.67□□□□□ -1.02
CASC4-207ENST00000559037 BMP1P13497 986 aa8.67□□□□□ -1.02
CASC4-207ENST00000559037 RAB15P59190 212 aa8.67□□□□□ -1.02
CASC4-207ENST00000559037 PROSER2Q86WR7 435 aaPredicted RBP8.67□□□□□ -1.02
CASC4-207ENST00000559037 ADH1AP07327 375 aa8.66□□□□□ -1.02
CASC4-207ENST00000559037 ERVK-9P63128 1117 aa8.66□□□□□ -1.02
CASC4-207ENST00000559037 CC2D2BQ6DHV5 1058 aa8.66□□□□□ -1.02
CASC4-207ENST00000559037 RIMBP3CA6NJZ7 1639 aa8.65□□□□□ -1.02
CASC4-207ENST00000559037 RIMBP3BA6NNM3 1639 aa8.65□□□□□ -1.02
CASC4-207ENST00000559037 RIMBP3Q9UFD9 1639 aa8.65□□□□□ -1.02
CASC4-207ENST00000559037 LILRA1O75019 489 aa8.65□□□□□ -1.02
CASC4-207ENST00000559037 MAP7D1Q3KQU3 841 aa8.65□□□□□ -1.02
CASC4-207ENST00000559037 RNF135Q8IUD6 432 aa8.65□□□□□ -1.02
CASC4-207ENST00000559037 NFATC2IPQ8NCF5 419 aa8.65□□□□□ -1.02
CASC4-207ENST00000559037 SIRT1Q96EB6 747 aa8.65□□□□□ -1.02
CASC4-207ENST00000559037 ZFP42Q96MM3 310 aa8.65□□□□□ -1.02
CASC4-207ENST00000559037 ESF1Q9H501 851 aaKnown RBP8.65□□□□□ -1.02
CASC4-207ENST00000559037 ALG2Q9H553 416 aa8.65□□□□□ -1.02
CASC4-207ENST00000559037 TMPRSS4Q9NRS4 437 aa8.65□□□□□ -1.02
CASC4-207ENST00000559037 PCDHB11Q9Y5F2 797 aa8.65□□□□□ -1.02
CASC4-207ENST00000559037 BIVM-ERCC5R4GMW8 1640 aa8.65□□□□□ -1.03
CASC4-207ENST00000559037 BMP2P12643 396 aa8.64□□□□□ -1.03
CASC4-207ENST00000559037 PHTF2Q8N3S3 785 aa8.64□□□□□ -1.03
CASC4-207ENST00000559037 FNBP4Q8N3X1 1017 aaPredicted RBP8.64□□□□□ -1.03
CASC4-207ENST00000559037 PURBQ96QR8 312 aaKnown RBP8.64□□□□□ -1.03
CASC4-207ENST00000559037 CHIC2Q9UKJ5 165 aa8.64□□□□□ -1.03
CASC4-207ENST00000559037 PBRM1Q86U86 1689 aa8.64□□□□□ -1.03
CASC4-207ENST00000559037 ABCA10Q8WWZ4 1543 aa8.64□□□□□ -1.03
CASC4-207ENST00000559037 TOP2BQ02880 1626 aa8.63□□□□□ -1.03
CASC4-207ENST00000559037 SPINT1O43278 529 aa8.63□□□□□ -1.03
CASC4-207ENST00000559037 MYCP01106 439 aaPredicted RBP8.63□□□□□ -1.03
CASC4-207ENST00000559037 CYP2U1Q7Z449 544 aa8.63□□□□□ -1.03
CASC4-207ENST00000559037 CLUAP1Q96AJ1 413 aa8.63□□□□□ -1.03
CASC4-207ENST00000559037 CYLDQ9NQC7 956 aa8.63□□□□□ -1.03
CASC4-207ENST00000559037 DOLKQ9UPQ8 538 aa8.63□□□□□ -1.03
CASC4-207ENST00000559037 LZTS3O60299 673 aaPredicted RBP8.62□□□□□ -1.03
CASC4-207ENST00000559037 CBLBQ13191 982 aa8.62□□□□□ -1.03
CASC4-207ENST00000559037 GRIN2BQ13224 1484 aa8.62□□□□□ -1.03
CASC4-207ENST00000559037 GAPVD1Q14C86 1478 aa8.62□□□□□ -1.03
CASC4-207ENST00000559037 MAGI1Q96QZ7 1491 aaPredicted RBP8.62□□□□□ -1.03
CASC4-207ENST00000559037 ABCA5Q8WWZ7 1642 aa8.62□□□□□ -1.03
CASC4-207ENST00000559037 SYNJ1O43426 1573 aa8.61□□□□□ -1.03
CASC4-207ENST00000559037 ARHGEF11O15085 1522 aa8.61□□□□□ -1.03
CASC4-207ENST00000559037 POTECB2RU33 542 aa8.61□□□□□ -1.03
CASC4-207ENST00000559037 ATP5J2-PTCD1G3V325 749 aa8.61□□□□□ -1.03
CASC4-207ENST00000559037 USP4Q13107 963 aa8.61□□□□□ -1.03
CASC4-207ENST00000559037 C6orf118Q5T5N4 469 aa8.61□□□□□ -1.03
CASC4-207ENST00000559037 ZNF775Q96BV0 537 aaPredicted RBP8.61□□□□□ -1.03
CASC4-207ENST00000559037 GTF3C3Q9Y5Q9 886 aa8.61□□□□□ -1.03
CASC4-207ENST00000559037 SNAPC4Q5SXM2 1469 aa8.61□□□□□ -1.03
CASC4-207ENST00000559037 WRNQ14191 1432 aaPredicted RBP eCLIP8.61□□□□□ -1.03
CASC4-207ENST00000559037 PTGIRP43119 386 aa8.6□□□□□ -1.03
CASC4-207ENST00000559037 CCDC85AQ96PX6 553 aaPredicted RBP8.6□□□□□ -1.03
CASC4-207ENST00000559037 SOS2Q07890 1332 aaPredicted RBP8.59□□□□□ -1.03
CASC4-207ENST00000559037 TRAK2O60296 914 aa8.59□□□□□ -1.03
CASC4-207ENST00000559037 SNRPBP14678 240 aaKnown RBP8.59□□□□□ -1.03
CASC4-207ENST00000559037 ADD1P35611 737 aaKnown RBP8.59□□□□□ -1.03
CASC4-207ENST00000559037 PLPP7Q8NBV4 271 aa8.59□□□□□ -1.03
CASC4-207ENST00000559037 CHMP7Q8WUX9 453 aaPredicted RBP8.59□□□□□ -1.03
CASC4-207ENST00000559037 SYNJ2O15056 1496 aa8.58□□□□□ -1.04
CASC4-207ENST00000559037 TTLL8A6PVC2 850 aa8.58□□□□□ -1.04
CASC4-207ENST00000559037 GNRH1P01148 92 aa8.58□□□□□ -1.04
CASC4-207ENST00000559037 RELBQ01201 579 aa8.58□□□□□ -1.04
CASC4-207ENST00000559037 NPAS3Q8IXF0 933 aa8.58□□□□□ -1.04
CASC4-207ENST00000559037 CLASP1Q7Z460 1538 aa8.58□□□□□ -1.04
CASC4-207ENST00000559037 POM121CA8CG34 1229 aa8.57□□□□□ -1.04
CASC4-207ENST00000559037 MAN1A2O60476 641 aa8.57□□□□□ -1.04
CASC4-207ENST00000559037 GPC1P35052 558 aa8.57□□□□□ -1.04
CASC4-207ENST00000559037 OSBPL3Q9H4L5 887 aa8.57□□□□□ -1.04
CASC4-207ENST00000559037 SCTRP47872 440 aa8.56□□□□□ -1.04
CASC4-207ENST00000559037 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.56□□□□□ -1.04
CASC4-207ENST00000559037 HDGFL1Q5TGJ6 251 aa8.56□□□□□ -1.04
CASC4-207ENST00000559037 CYB5RLQ6IPT4 315 aa8.56□□□□□ -1.04
CASC4-207ENST00000559037 AGBL1Q96MI9 1066 aa8.56□□□□□ -1.04
CASC4-207ENST00000559037 CLN3Q13286 438 aa8.55□□□□□ -1.04
CASC4-207ENST00000559037 EML3Q32P44 896 aa8.55□□□□□ -1.04
CASC4-207ENST00000559037 ESCO1Q5FWF5 840 aa8.55□□□□□ -1.04
CASC4-207ENST00000559037 KDF1Q8NAX2 398 aaPredicted RBP8.55□□□□□ -1.04
CASC4-207ENST00000559037 GLMNQ92990 594 aa8.55□□□□□ -1.04
CASC4-207ENST00000559037 RNF144AP50876 292 aaPredicted RBP8.54□□□□□ -1.04
CASC4-207ENST00000559037 OXLD1Q5BKU9 147 aa8.54□□□□□ -1.04
CASC4-207ENST00000559037 ERICH6Q7L0X2 663 aa8.54□□□□□ -1.04
CASC4-207ENST00000559037 PLEKHM2Q8IWE5 1019 aa8.54□□□□□ -1.04
CASC4-207ENST00000559037 ADAMTS19Q8TE59 1207 aa8.54□□□□□ -1.04
CASC4-207ENST00000559037 CDCA7Q9BWT1 371 aaPredicted RBP8.54□□□□□ -1.04
CASC4-207ENST00000559037 POLMQ9NP87 494 aaPredicted RBP8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms