RNA–Protein interactions for RNA: ENST00000555470.1

PPP4R3A-209, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 3

Gene PPP4R3A, Length 595 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-209ENST00000555470 ZBTB33Q86T24 672 aa7.93□□□□□ -1.14
PPP4R3A-209ENST00000555470 LRRN4Q8WUT4 740 aa7.93□□□□□ -1.14
PPP4R3A-209ENST00000555470 SLC10A4Q96EP9 437 aa7.93□□□□□ -1.14
PPP4R3A-209ENST00000555470 PTK2Q05397 1052 aa7.92□□□□□ -1.14
PPP4R3A-209ENST00000555470 DHX9Q08211 1270 aaKnown RBP7.92□□□□□ -1.14
PPP4R3A-209ENST00000555470 CBLBQ13191 982 aa7.92□□□□□ -1.14
PPP4R3A-209ENST00000555470 ERFEQ4G0M1 354 aa7.92□□□□□ -1.14
PPP4R3A-209ENST00000555470 CTSOP43234 321 aaPredicted RBP7.91□□□□□ -1.14
PPP4R3A-209ENST00000555470 GPSM3Q9Y4H4 160 aa7.91□□□□□ -1.14
PPP4R3A-209ENST00000555470 FURINP09958 794 aa7.9□□□□□ -1.14
PPP4R3A-209ENST00000555470 BCRP11274 1271 aa7.9□□□□□ -1.14
PPP4R3A-209ENST00000555470 PPP1R26Q5T8A7 1209 aaPredicted RBP7.9□□□□□ -1.14
PPP4R3A-209ENST00000555470 NEDD1Q8NHV4 660 aa7.9□□□□□ -1.14
PPP4R3A-209ENST00000555470 TRIM52Q96A61 297 aa7.9□□□□□ -1.14
PPP4R3A-209ENST00000555470 KRTAP4-12Q9BQ66 201 aa7.9□□□□□ -1.14
PPP4R3A-209ENST00000555470 OCSTAMPQ9BR26 566 aa7.9□□□□□ -1.14
PPP4R3A-209ENST00000555470 MBIPQ9NS73 344 aa7.9□□□□□ -1.14
PPP4R3A-209ENST00000555470 AP1G2O75843 785 aa7.89□□□□□ -1.15
PPP4R3A-209ENST00000555470 NR6A1Q15406 480 aa7.88□□□□□ -1.15
PPP4R3A-209ENST00000555470 RNF217Q8TC41 542 aa7.88□□□□□ -1.15
PPP4R3A-209ENST00000555470 KCTD15Q96SI1 283 aaPredicted RBP7.88□□□□□ -1.15
PPP4R3A-209ENST00000555470 IGF1RP08069 1367 aa7.87□□□□□ -1.15
PPP4R3A-209ENST00000555470 KRBA1A5PL33 1030 aa7.87□□□□□ -1.15
PPP4R3A-209ENST00000555470 NBPF20Q3BBV1 942 aa7.87□□□□□ -1.15
PPP4R3A-209ENST00000555470 EPS8L1Q8TE68 723 aa7.87□□□□□ -1.15
PPP4R3A-209ENST00000555470 LRRC4BQ9NT99 713 aa7.87□□□□□ -1.15
PPP4R3A-209ENST00000555470 CUEDC1Q9NWM3 386 aaPredicted RBP7.87□□□□□ -1.15
PPP4R3A-209ENST00000555470 INSM2Q96T92 566 aaPredicted RBP7.86□□□□□ -1.15
PPP4R3A-209ENST00000555470 HMX1Q9NP08 348 aaPredicted RBP7.86□□□□□ -1.15
PPP4R3A-209ENST00000555470 ALYREFQ86V81 257 aaKnown RBP7.84□□□□□ -1.15
PPP4R3A-209ENST00000555470 ACDQ96AP0 544 aa7.84□□□□□ -1.15
PPP4R3A-209ENST00000555470 PCMTD1Q96MG8 357 aaPredicted RBP7.84□□□□□ -1.15
PPP4R3A-209ENST00000555470 AGBL1Q96MI9 1066 aa7.84□□□□□ -1.15
PPP4R3A-209ENST00000555470 POLMQ9NP87 494 aaPredicted RBP7.84□□□□□ -1.15
PPP4R3A-209ENST00000555470 USP17L8P0C7I0 530 aa7.83□□□□□ -1.16
PPP4R3A-209ENST00000555470 RELBQ01201 579 aa7.83□□□□□ -1.16
PPP4R3A-209ENST00000555470 DZIP3Q86Y13 1208 aaKnown RBP7.83□□□□□ -1.16
PPP4R3A-209ENST00000555470 ADAM32Q8TC27 787 aa7.83□□□□□ -1.16
PPP4R3A-209ENST00000555470 GMCL1Q96IK5 515 aa7.83□□□□□ -1.16
PPP4R3A-209ENST00000555470 GOPCQ9HD26 462 aa7.83□□□□□ -1.16
PPP4R3A-209ENST00000555470 RFC5P40937 340 aa7.82□□□□□ -1.16
PPP4R3A-209ENST00000555470 TMEM259Q4ZIN3 620 aa7.82□□□□□ -1.16
PPP4R3A-209ENST00000555470 ZNF837Q96EG3 531 aaPredicted RBP7.82□□□□□ -1.16
PPP4R3A-209ENST00000555470 SUPT5HO00267 1087 aaKnown RBP7.81□□□□□ -1.16
PPP4R3A-209ENST00000555470 INTS6LQ5JSJ4 861 aaKnown RBP7.81□□□□□ -1.16
PPP4R3A-209ENST00000555470 TRIM34Q9BYJ4 488 aa7.81□□□□□ -1.16
PPP4R3A-209ENST00000555470 FOXD4L5Q5VV16 416 aaPredicted RBP7.8□□□□□ -1.16
PPP4R3A-209ENST00000555470 KRTAP9-9Q9BYP9 154 aa7.8□□□□□ -1.16
PPP4R3A-209ENST00000555470 KRTAP9-4Q9BYQ2 154 aa7.8□□□□□ -1.16
PPP4R3A-209ENST00000555470 BRPF1P55201 1214 aaPredicted RBP7.79□□□□□ -1.16
PPP4R3A-209ENST00000555470 FOXR1Q6PIV2 292 aa7.79□□□□□ -1.16
PPP4R3A-209ENST00000555470 TRIM22Q8IYM9 498 aa7.79□□□□□ -1.16
PPP4R3A-209ENST00000555470 GPR25O00155 361 aa7.78□□□□□ -1.16
PPP4R3A-209ENST00000555470 OIP5O43482 229 aa7.78□□□□□ -1.16
PPP4R3A-209ENST00000555470 ITGB7P26010 798 aa7.78□□□□□ -1.16
PPP4R3A-209ENST00000555470 COL8A1P27658 744 aa7.78□□□□□ -1.16
PPP4R3A-209ENST00000555470 SNRPNP63162 240 aaKnown RBP7.78□□□□□ -1.16
PPP4R3A-209ENST00000555470 SEPT12Q8IYM1 358 aa7.78□□□□□ -1.16
PPP4R3A-209ENST00000555470 IL27Q8NEV9 243 aa7.78□□□□□ -1.16
PPP4R3A-209ENST00000555470 ZNF395Q9H8N7 513 aaPredicted RBP7.78□□□□□ -1.16
PPP4R3A-209ENST00000555470 BTBD11A6QL63 1104 aa7.77□□□□□ -1.17
PPP4R3A-209ENST00000555470 RAB15P59190 212 aa7.77□□□□□ -1.17
PPP4R3A-209ENST00000555470 NEUROD2Q15784 382 aa7.77□□□□□ -1.17
PPP4R3A-209ENST00000555470 LYSMD3Q7Z3D4 306 aa7.77□□□□□ -1.17
PPP4R3A-209ENST00000555470 CCDC125Q86Z20 511 aa7.77□□□□□ -1.17
PPP4R3A-209ENST00000555470 ZNF592Q92610 1267 aa7.77□□□□□ -1.17
PPP4R3A-209ENST00000555470 MKL2Q9ULH7 1088 aa7.77□□□□□ -1.17
PPP4R3A-209ENST00000555470 GJD4Q96KN9 370 aaPredicted RBP7.76□□□□□ -1.17
PPP4R3A-209ENST00000555470 ZNF784Q8NCA9 323 aaPredicted RBP7.75□□□□□ -1.17
PPP4R3A-209ENST00000555470 ZBBXA8MT70 800 aa7.74□□□□□ -1.17
PPP4R3A-209ENST00000555470 ERVH48-1M5A8F1 160 aa7.74□□□□□ -1.17
PPP4R3A-209ENST00000555470 ADH1AP07327 375 aa7.74□□□□□ -1.17
PPP4R3A-209ENST00000555470 MCCD1P59942 119 aaPredicted RBP7.74□□□□□ -1.17
PPP4R3A-209ENST00000555470 DBN1Q16643 649 aa7.74□□□□□ -1.17
PPP4R3A-209ENST00000555470 NPM2Q86SE8 214 aaKnown RBP7.74□□□□□ -1.17
PPP4R3A-209ENST00000555470 TMPRSS4Q9NRS4 437 aa7.74□□□□□ -1.17
PPP4R3A-209ENST00000555470 ZNF330Q9Y3S2 320 aaPredicted RBP7.74□□□□□ -1.17
PPP4R3A-209ENST00000555470 KRTAP4-8A0A0G2JLE6 195 aa7.73□□□□□ -1.17
PPP4R3A-209ENST00000555470 ESPNB1AK53 854 aa7.73□□□□□ -1.17
PPP4R3A-209ENST00000555470 GPR37L1O60883 481 aa7.73□□□□□ -1.17
PPP4R3A-209ENST00000555470 NSFL1CQ9UNZ2 370 aaKnown RBP7.73□□□□□ -1.17
PPP4R3A-209ENST00000555470 APBB1O00213 710 aa7.72□□□□□ -1.17
PPP4R3A-209ENST00000555470 MX2P20592 715 aa7.72□□□□□ -1.17
PPP4R3A-209ENST00000555470 PTGIRP43119 386 aa7.72□□□□□ -1.17
PPP4R3A-209ENST00000555470 ZMYM1Q5SVZ6 1142 aa7.72□□□□□ -1.17
PPP4R3A-209ENST00000555470 RNF20Q5VTR2 975 aa7.72□□□□□ -1.17
PPP4R3A-209ENST00000555470 KDF1Q8NAX2 398 aaPredicted RBP7.72□□□□□ -1.17
PPP4R3A-209ENST00000555470 PCDHB9Q9Y5E1 797 aa7.72□□□□□ -1.17
PPP4R3A-209ENST00000555470 LILRA1O75019 489 aa7.71□□□□□ -1.18
PPP4R3A-209ENST00000555470 GTPBP3Q969Y2 492 aaKnown RBP7.71□□□□□ -1.18
PPP4R3A-209ENST00000555470 TRERF1Q96PN7 1200 aa7.71□□□□□ -1.18
PPP4R3A-209ENST00000555470 C1QTNF9BB2RNN3 333 aa7.7□□□□□ -1.18
PPP4R3A-209ENST00000555470 SHISA8B8ZZ34 492 aa7.7□□□□□ -1.18
PPP4R3A-209ENST00000555470 H7C1W4 665 aa7.7□□□□□ -1.18
PPP4R3A-209ENST00000555470 ADD1P35611 737 aaKnown RBP7.7□□□□□ -1.18
PPP4R3A-209ENST00000555470 OXCT2Q9BYC2 517 aaPredicted RBP7.7□□□□□ -1.18
PPP4R3A-209ENST00000555470 ESF1Q9H501 851 aaKnown RBP7.7□□□□□ -1.18
PPP4R3A-209ENST00000555470 RHOQP17081 205 aa7.69□□□□□ -1.18
PPP4R3A-209ENST00000555470 RNF144AP50876 292 aaPredicted RBP7.69□□□□□ -1.18
PPP4R3A-209ENST00000555470 RIPOR1Q6ZS17 1223 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms