RNA–Protein interactions for RNA: ENST00000555470.1

PPP4R3A-209, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 3

Gene PPP4R3A, Length 595 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-209ENST00000555470 AEBP2Q6ZN18 517 aaPredicted RBP25.75■■□□□ 1.71
PPP4R3A-209ENST00000555470 CHIC1Q5VXU3 224 aa24.06■■□□□ 1.44
PPP4R3A-209ENST00000555470 SENP3Q9H4L4 574 aaPredicted RBP22.07■■□□□ 1.12
PPP4R3A-209ENST00000555470 PHF23Q9BUL5 403 aaPredicted RBP21.68■■□□□ 1.06
PPP4R3A-209ENST00000555470 FOXD1Q16676 465 aa20.64■□□□□ 0.89
PPP4R3A-209ENST00000555470 POTEDQ86YR6 584 aa20.15■□□□□ 0.82
PPP4R3A-209ENST00000555470 MSH5O43196 834 aa19.57■□□□□ 0.72
PPP4R3A-209ENST00000555470 PIAS4Q8N2W9 510 aaPredicted RBP19.12■□□□□ 0.65
PPP4R3A-209ENST00000555470 PPP6R1Q9UPN7 881 aa18.8■□□□□ 0.6
PPP4R3A-209ENST00000555470 PLPPR3Q6T4P5 718 aa18.78■□□□□ 0.6
PPP4R3A-209ENST00000555470 ADRA2BP18089 450 aa18.69■□□□□ 0.58
PPP4R3A-209ENST00000555470 DMRT2Q9Y5R5 561 aa17.41■□□□□ 0.38
PPP4R3A-209ENST00000555470 MAPK8IP2Q13387 824 aaPredicted RBP17.35■□□□□ 0.37
PPP4R3A-209ENST00000555470 CACNB1Q02641 598 aaPredicted RBP17.14■□□□□ 0.33
PPP4R3A-209ENST00000555470 SCAF1Q9H7N4 1312 aaKnown RBP17.14■□□□□ 0.33
PPP4R3A-209ENST00000555470 DCAF8L1A6NGE4 600 aa16.65■□□□□ 0.26
PPP4R3A-209ENST00000555470 RNF39Q9H2S5 420 aa16.64■□□□□ 0.25
PPP4R3A-209ENST00000555470 HOXD11P31277 338 aaPredicted RBP16.55■□□□□ 0.24
PPP4R3A-209ENST00000555470 PPP4R3CPQ6ZMV5 832 aa16.37■□□□□ 0.21
PPP4R3A-209ENST00000555470 C1QBPQ07021 282 aaKnown RBP16.36■□□□□ 0.21
PPP4R3A-209ENST00000555470 RNF216Q9NWF9 866 aaPredicted RBP16.24■□□□□ 0.19
PPP4R3A-209ENST00000555470 CNKSR2Q8WXI2 1034 aa16.22■□□□□ 0.19
PPP4R3A-209ENST00000555470 DNAJC5BQ9UF47 199 aa16.14■□□□□ 0.17
PPP4R3A-209ENST00000555470 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.7■□□□□ 0.14e-12■■□□□ 11.9
PPP4R3A-209ENST00000555470 POTEHQ6S545 545 aa15.66■□□□□ 0.1
PPP4R3A-209ENST00000555470 NCBP3Q53F19 620 aaKnown RBP15.55■□□□□ 0.08
PPP4R3A-209ENST00000555470 DSG3P32926 999 aa15.37■□□□□ 0.05
PPP4R3A-209ENST00000555470 U3KPZ7 1027 aaPredicted RBP15.34■□□□□ 0.05
PPP4R3A-209ENST00000555470 NPM3O75607 178 aaKnown RBP15.32■□□□□ 0.04
PPP4R3A-209ENST00000555470 SPINK5Q9NQ38 1064 aaPredicted RBP15.28■□□□□ 0.04
PPP4R3A-209ENST00000555470 CAPN15O75808 1086 aa15.27■□□□□ 0.04
PPP4R3A-209ENST00000555470 TRHP20396 242 aaPredicted RBP14.87□□□□□ -0.03
PPP4R3A-209ENST00000555470 ZNF219Q9P2Y4 722 aaPredicted RBP14.86□□□□□ -0.03
PPP4R3A-209ENST00000555470 ABCB7O75027 752 aa14.85□□□□□ -0.03
PPP4R3A-209ENST00000555470 APLP2Q06481 763 aa14.85□□□□□ -0.03
PPP4R3A-209ENST00000555470 SLC4A2P04920 1241 aa14.81□□□□□ -0.04
PPP4R3A-209ENST00000555470 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.69□□□□□ -0.06
PPP4R3A-209ENST00000555470 HNRNPUL2Q1KMD3 747 aaKnown RBP14.69□□□□□ -0.06
PPP4R3A-209ENST00000555470 RBM42Q9BTD8 480 aaKnown RBP14.69□□□□□ -0.06
PPP4R3A-209ENST00000555470 CHRDL2Q6WN34 429 aa14.59□□□□□ -0.07
PPP4R3A-209ENST00000555470 SAMD1Q6SPF0 538 aaPredicted RBP14.57□□□□□ -0.08
PPP4R3A-209ENST00000555470 KCNA4P22459 653 aa14.46□□□□□ -0.09
PPP4R3A-209ENST00000555470 SP7Q8TDD2 431 aaPredicted RBP14.4□□□□□ -0.1
PPP4R3A-209ENST00000555470 POLA2Q14181 598 aa14.35□□□□□ -0.11
PPP4R3A-209ENST00000555470 AKT1S1Q96B36 256 aa14.21□□□□□ -0.13
PPP4R3A-209ENST00000555470 MYCNP04198 464 aaPredicted RBP14.2□□□□□ -0.14
PPP4R3A-209ENST00000555470 PIP4P2Q8N4L2 257 aa14.11□□□□□ -0.15
PPP4R3A-209ENST00000555470 REM2Q8IYK8 340 aaPredicted RBP14.07□□□□□ -0.16
PPP4R3A-209ENST00000555470 ZBTB12Q9Y330 459 aaPredicted RBP14.03□□□□□ -0.16
PPP4R3A-209ENST00000555470 HAX1O00165 279 aa14□□□□□ -0.17
PPP4R3A-209ENST00000555470 FXR2P51116 673 aaKnown RBP eCLIP13.95□□□□□ -0.18
PPP4R3A-209ENST00000555470 PITPNM1O00562 1244 aa13.92□□□□□ -0.18
PPP4R3A-209ENST00000555470 OSCARQ8IYS5 282 aa13.91□□□□□ -0.18
PPP4R3A-209ENST00000555470 ATF5Q9Y2D1 282 aaPredicted RBP13.9□□□□□ -0.18
PPP4R3A-209ENST00000555470 EVX2Q03828 476 aa13.8□□□□□ -0.2
PPP4R3A-209ENST00000555470 FOXD4L1Q9NU39 408 aa13.71□□□□□ -0.21
PPP4R3A-209ENST00000555470 SPDYE2BA6NHP3 402 aa13.55□□□□□ -0.24
PPP4R3A-209ENST00000555470 SPDYE6P0CI01 402 aa13.55□□□□□ -0.24
PPP4R3A-209ENST00000555470 PRKAR2AP13861 404 aaKnown RBP13.55□□□□□ -0.24
PPP4R3A-209ENST00000555470 SPDYE2Q495Y8 402 aa13.55□□□□□ -0.24
PPP4R3A-209ENST00000555470 SLC4A1APQ9BWU0 796 aaKnown RBP13.55□□□□□ -0.24
PPP4R3A-209ENST00000555470 C19orf67A6NJJ6 358 aa13.52□□□□□ -0.25
PPP4R3A-209ENST00000555470 LHX8Q68G74 356 aa13.48□□□□□ -0.25
PPP4R3A-209ENST00000555470 GABBR2O75899 941 aa13.46□□□□□ -0.25
PPP4R3A-209ENST00000555470 SPDYE1Q8NFV5 336 aaPredicted RBP13.46□□□□□ -0.25
PPP4R3A-209ENST00000555470 CLEC11AQ9Y240 323 aa13.43□□□□□ -0.26
PPP4R3A-209ENST00000555470 FBLN2P98095 1184 aa13.4□□□□□ -0.26
PPP4R3A-209ENST00000555470 ATXN8OSP0DMR3 200 aa13.37□□□□□ -0.27
PPP4R3A-209ENST00000555470 SSUH2Q9Y2M2 353 aa13.31□□□□□ -0.28
PPP4R3A-209ENST00000555470 ZBTB22O15209 634 aa13.29□□□□□ -0.28
PPP4R3A-209ENST00000555470 ZNF692Q9BU19 519 aaPredicted RBP13.26□□□□□ -0.29
PPP4R3A-209ENST00000555470 CHADLQ6NUI6 762 aa13.25□□□□□ -0.29
PPP4R3A-209ENST00000555470 MKRN4PQ13434 485 aaPredicted RBP13.24□□□□□ -0.29
PPP4R3A-209ENST00000555470 POTEIP0CG38 1075 aa13.18□□□□□ -0.3
PPP4R3A-209ENST00000555470 PRR29P0C7W0 189 aa13.13□□□□□ -0.31
PPP4R3A-209ENST00000555470 PLSCR2Q9NRY7 297 aa13.1□□□□□ -0.31
PPP4R3A-209ENST00000555470 CLCN6P51797 869 aa13.09□□□□□ -0.31
PPP4R3A-209ENST00000555470 CD44P16070 742 aaKnown RBP13.08□□□□□ -0.32
PPP4R3A-209ENST00000555470 PABPN1Q86U42 306 aaKnown RBP eCLIP13.04□□□□□ -0.32
PPP4R3A-209ENST00000555470 FARP1Q9Y4F1 1045 aaPredicted RBP13.01□□□□□ -0.33
PPP4R3A-209ENST00000555470 DCBLD2Q96PD2 775 aa12.95□□□□□ -0.34
PPP4R3A-209ENST00000555470 ZNF579Q8NAF0 562 aaKnown RBP12.88□□□□□ -0.35
PPP4R3A-209ENST00000555470 OTUD5Q96G74 571 aa12.81□□□□□ -0.36
PPP4R3A-209ENST00000555470 ZRANB1Q9UGI0 708 aa12.79□□□□□ -0.36
PPP4R3A-209ENST00000555470 CSRNP3Q8WYN3 585 aa12.77□□□□□ -0.37
PPP4R3A-209ENST00000555470 GALR2O43603 387 aaPredicted RBP12.74□□□□□ -0.37
PPP4R3A-209ENST00000555470 POTEB2H3BUK9 544 aa12.73□□□□□ -0.37
PPP4R3A-209ENST00000555470 POTEMA6NI47 508 aa12.72□□□□□ -0.37
PPP4R3A-209ENST00000555470 CREBZFQ9NS37 354 aa12.68□□□□□ -0.38
PPP4R3A-209ENST00000555470 POTEGQ6S5H5 508 aa12.66□□□□□ -0.38
PPP4R3A-209ENST00000555470 EHMT2Q96KQ7 1210 aa12.6□□□□□ -0.39
PPP4R3A-209ENST00000555470 PCDH10Q9P2E7 1040 aa12.59□□□□□ -0.39
PPP4R3A-209ENST00000555470 STAG3Q9UJ98 1225 aa12.58□□□□□ -0.4
PPP4R3A-209ENST00000555470 PAK3O75914 559 aaPredicted RBP12.56□□□□□ -0.4
PPP4R3A-209ENST00000555470 PHF12Q96QT6 1004 aa12.56□□□□□ -0.4
PPP4R3A-209ENST00000555470 PELP1Q8IZL8 1130 aaKnown RBP12.55□□□□□ -0.4
PPP4R3A-209ENST00000555470 ASTLQ6HA08 431 aaPredicted RBP12.46□□□□□ -0.41
PPP4R3A-209ENST00000555470 METRNQ9UJH8 293 aa12.46□□□□□ -0.41
PPP4R3A-209ENST00000555470 POTEJP0CG39 1038 aa12.44□□□□□ -0.42
PPP4R3A-209ENST00000555470 SLC39A7Q92504 469 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms