RNA–Protein interactions for RNA: ENST00000554973.1

FCF1-207, Transcript of FCF1, rRNA-processing protein, humanhuman

TSL 3

Gene FCF1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FCF1-207ENST00000554973 FKBP4Q02790 459 aaKnown RBP eCLIP8.94□□□□□ -0.98
FCF1-207ENST00000554973 SF3B2Q13435 895 aaKnown RBP8.94□□□□□ -0.98
FCF1-207ENST00000554973 PPP1R18Q6NYC8 613 aa8.94□□□□□ -0.98
FCF1-207ENST00000554973 PRIMPOLQ96LW4 560 aa8.94□□□□□ -0.98
FCF1-207ENST00000554973 CHMP4AQ9BY43 222 aa8.94□□□□□ -0.98
FCF1-207ENST00000554973 BACH2Q9BYV9 841 aa8.94□□□□□ -0.98
FCF1-207ENST00000554973 ANO2Q9NQ90 1003 aa8.94□□□□□ -0.98
FCF1-207ENST00000554973 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.94□□□□□ -0.98
FCF1-207ENST00000554973 KMT5BQ4FZB7 885 aa8.93□□□□□ -0.98
FCF1-207ENST00000554973 PDXDC2PQ6P474 469 aa8.93□□□□□ -0.98
FCF1-207ENST00000554973 RGL4Q8IZJ4 473 aa8.93□□□□□ -0.98
FCF1-207ENST00000554973 GTF3C2Q8WUA4 911 aaPredicted RBP8.93□□□□□ -0.98
FCF1-207ENST00000554973 SLC27A5Q9Y2P5 690 aa8.93□□□□□ -0.98
FCF1-207ENST00000554973 RBM19Q9Y4C8 960 aaKnown RBP8.93□□□□□ -0.98
FCF1-207ENST00000554973 PCDHB9Q9Y5E1 797 aa8.93□□□□□ -0.98
FCF1-207ENST00000554973 PCDHB3Q9Y5E6 796 aa8.93□□□□□ -0.98
FCF1-207ENST00000554973 ARHGAP4P98171 946 aa8.92□□□□□ -0.98
FCF1-207ENST00000554973 MRPL58Q14197 206 aaKnown RBP8.92□□□□□ -0.98
FCF1-207ENST00000554973 LAPTM4AQ15012 233 aa8.92□□□□□ -0.98
FCF1-207ENST00000554973 GPKOWQ92917 476 aaPredicted RBP eCLIP8.92□□□□□ -0.98
FCF1-207ENST00000554973 PRKD2Q9BZL6 878 aa8.92□□□□□ -0.98
FCF1-207ENST00000554973 EIF5BO60841 1220 aaKnown RBP8.91□□□□□ -0.98
FCF1-207ENST00000554973 Q6ZNB5 142 aa8.91□□□□□ -0.98
FCF1-207ENST00000554973 ANKRD13AQ8IZ07 590 aa8.91□□□□□ -0.98
FCF1-207ENST00000554973 ARMC2Q8NEN0 867 aa8.91□□□□□ -0.98
FCF1-207ENST00000554973 USB1Q9BQ65 265 aaKnown RBP8.91□□□□□ -0.98
FCF1-207ENST00000554973 ZPR1O75312 459 aa8.9□□□□□ -0.98
FCF1-207ENST00000554973 HDLBPQ00341 1268 aaKnown RBP8.9□□□□□ -0.98
FCF1-207ENST00000554973 MAP10Q9P2G4 905 aa8.9□□□□□ -0.98
FCF1-207ENST00000554973 DNMT3AQ9Y6K1 912 aaPredicted RBP8.9□□□□□ -0.98
FCF1-207ENST00000554973 PTPRNQ16849 979 aa8.89□□□□□ -0.99
FCF1-207ENST00000554973 TSGA10IPQ3SY00 556 aa8.89□□□□□ -0.99
FCF1-207ENST00000554973 CCDC102BQ68D86 513 aa8.89□□□□□ -0.99
FCF1-207ENST00000554973 NKX2-3Q8TAU0 364 aa8.89□□□□□ -0.99
FCF1-207ENST00000554973 PIK3R5Q8WYR1 880 aa8.89□□□□□ -0.99
FCF1-207ENST00000554973 KIAA1024Q9UPX6 916 aa8.89□□□□□ -0.99
FCF1-207ENST00000554973 SALL2Q9Y467 1007 aaPredicted RBP8.89□□□□□ -0.99
FCF1-207ENST00000554973 V9GY48 417 aaPredicted RBP8.89□□□□□ -0.99
FCF1-207ENST00000554973 GTF2IP78347 998 aa8.88□□□□□ -0.99
FCF1-207ENST00000554973 DPH6Q7L8W6 267 aa8.88□□□□□ -0.99
FCF1-207ENST00000554973 OCSTAMPQ9BR26 566 aa8.88□□□□□ -0.99
FCF1-207ENST00000554973 SEPT3Q9UH03 358 aa8.88□□□□□ -0.99
FCF1-207ENST00000554973 ACTN4O43707 911 aaKnown RBP8.87□□□□□ -0.99
FCF1-207ENST00000554973 FMNL1O95466 1100 aaPredicted RBP8.87□□□□□ -0.99
FCF1-207ENST00000554973 PUS10Q3MIT2 529 aaKnown RBP8.87□□□□□ -0.99
FCF1-207ENST00000554973 GIMAP6Q6P9H5 292 aa8.87□□□□□ -0.99
FCF1-207ENST00000554973 BLOC1S3Q6QNY0 202 aa8.87□□□□□ -0.99
FCF1-207ENST00000554973 ANKRD62A6NC57 917 aa8.86□□□□□ -0.99
FCF1-207ENST00000554973 GFRA3O60609 400 aa8.86□□□□□ -0.99
FCF1-207ENST00000554973 PTCD1O75127 700 aaKnown RBP8.86□□□□□ -0.99
FCF1-207ENST00000554973 CTHP32929 405 aa8.86□□□□□ -0.99
FCF1-207ENST00000554973 ITGAEP38570 1179 aa8.86□□□□□ -0.99
FCF1-207ENST00000554973 FGD1P98174 961 aa8.86□□□□□ -0.99
FCF1-207ENST00000554973 BRICD5Q6PL45 260 aa8.86□□□□□ -0.99
FCF1-207ENST00000554973 NOP9Q86U38 636 aaKnown RBP8.86□□□□□ -0.99
FCF1-207ENST00000554973 DOLKQ9UPQ8 538 aa8.86□□□□□ -0.99
FCF1-207ENST00000554973 SFI1A8K8P3 1242 aa8.85□□□□□ -0.99
FCF1-207ENST00000554973 JUNDP17535 347 aa8.85□□□□□ -0.99
FCF1-207ENST00000554973 LDLRAD1Q5T700 205 aa8.85□□□□□ -0.99
FCF1-207ENST00000554973 C9orf131Q5VYM1 1079 aa8.85□□□□□ -0.99
FCF1-207ENST00000554973 RNF19BQ6ZMZ0 732 aa8.85□□□□□ -0.99
FCF1-207ENST00000554973 RBCK1Q9BYM8 510 aa8.85□□□□□ -0.99
FCF1-207ENST00000554973 P4HBP07237 508 aaKnown RBP8.84□□□□□ -0.99
FCF1-207ENST00000554973 WEE1P30291 646 aa8.84□□□□□ -0.99
FCF1-207ENST00000554973 RAD51AP2Q09MP3 1159 aa8.84□□□□□ -0.99
FCF1-207ENST00000554973 NBPF14Q5TI25 921 aa8.84□□□□□ -0.99
FCF1-207ENST00000554973 SLC43A3Q8NBI5 491 aa8.84□□□□□ -0.99
FCF1-207ENST00000554973 TPCN2Q8NHX9 752 aa8.84□□□□□ -0.99
FCF1-207ENST00000554973 ADAM32Q8TC27 787 aa8.84□□□□□ -0.99
FCF1-207ENST00000554973 HINFPQ9BQA5 517 aa8.84□□□□□ -0.99
FCF1-207ENST00000554973 HIRIP3Q9BW71 556 aaPredicted RBP8.84□□□□□ -0.99
FCF1-207ENST00000554973 TANGO6Q9C0B7 1094 aa8.84□□□□□ -0.99
FCF1-207ENST00000554973 CUEDC1Q9NWM3 386 aaPredicted RBP8.84□□□□□ -0.99
FCF1-207ENST00000554973 NPR3P17342 541 aa8.83□□□□□ -1
FCF1-207ENST00000554973 COL26A1Q96A83 441 aa8.83□□□□□ -1
FCF1-207ENST00000554973 CCDC85AQ96PX6 553 aaPredicted RBP8.83□□□□□ -1
FCF1-207ENST00000554973 PCDHGA11Q9Y5H2 935 aa8.83□□□□□ -1
FCF1-207ENST00000554973 TTBK1Q5TCY1 1321 aaPredicted RBP8.82□□□□□ -1
FCF1-207ENST00000554973 NR1I2O75469 434 aa8.82□□□□□ -1
FCF1-207ENST00000554973 FAM13AO94988 1023 aa8.82□□□□□ -1
FCF1-207ENST00000554973 MTMR3Q13615 1198 aa8.82□□□□□ -1
FCF1-207ENST00000554973 OXLD1Q5BKU9 147 aa8.82□□□□□ -1
FCF1-207ENST00000554973 METTL16Q86W50 562 aaKnown RBP8.82□□□□□ -1
FCF1-207ENST00000554973 TMEM87AQ8NBN3 555 aa8.82□□□□□ -1
FCF1-207ENST00000554973 HELQQ8TDG4 1101 aa8.82□□□□□ -1
FCF1-207ENST00000554973 ARHGAP9Q9BRR9 750 aa8.82□□□□□ -1
FCF1-207ENST00000554973 EVA1BQ9NVM1 165 aa8.82□□□□□ -1
FCF1-207ENST00000554973 M0R2N6 131 aa8.81□□□□□ -1
FCF1-207ENST00000554973 NRG2O14511 850 aaPredicted RBP8.81□□□□□ -1
FCF1-207ENST00000554973 XPCQ01831 940 aaPredicted RBP8.81□□□□□ -1
FCF1-207ENST00000554973 TMC7Q7Z402 723 aa8.81□□□□□ -1
FCF1-207ENST00000554973 NT5DC4Q86YG4 428 aa8.81□□□□□ -1
FCF1-207ENST00000554973 MKNK1Q9BUB5 465 aa8.81□□□□□ -1
FCF1-207ENST00000554973 METTL5Q9NRN9 209 aaKnown RBP8.81□□□□□ -1
FCF1-207ENST00000554973 BRPF3Q9ULD4 1205 aa8.81□□□□□ -1
FCF1-207ENST00000554973 TREHO43280 583 aa8.8□□□□□ -1
FCF1-207ENST00000554973 TLL1O43897 1013 aa8.8□□□□□ -1
FCF1-207ENST00000554973 CCNYL3P0C7X3 344 aa8.8□□□□□ -1
FCF1-207ENST00000554973 PSME1Q06323 249 aa8.8□□□□□ -1
FCF1-207ENST00000554973 FMR1Q06787 632 aaKnown RBP eCLIP8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms