RNA–Protein interactions for RNA: ENST00000554546.5

NUMB-212, Transcript of NUMB, endocytic adaptor protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene NUMB, Length 3,607 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUMB-212ENST00000554546 DRC7Q8IY82 874 aa13.45□□□□□ -0.26
NUMB-212ENST00000554546 EIF3CQ99613 913 aaKnown RBP13.45□□□□□ -0.26
NUMB-212ENST00000554546 TTC19Q6DKK2 380 aaPredicted RBP13.45□□□□□ -0.26
NUMB-212ENST00000554546 PPM1EQ8WY54 764 aa13.45□□□□□ -0.26
NUMB-212ENST00000554546 ERCC6LQ2NKX8 1250 aa13.44□□□□□ -0.26
NUMB-212ENST00000554546 MMS22LQ6ZRQ5 1243 aa13.44□□□□□ -0.26
NUMB-212ENST00000554546 AK7Q96M32 723 aa13.44□□□□□ -0.26
NUMB-212ENST00000554546 KDM5CP41229 1560 aa13.44□□□□□ -0.26
NUMB-212ENST00000554546 HMGXB3Q12766 1538 aa13.44□□□□□ -0.26
NUMB-212ENST00000554546 TTC36A6NLP5 189 aa13.44□□□□□ -0.26
NUMB-212ENST00000554546 SMARCA5O60264 1052 aaPredicted RBP13.44□□□□□ -0.26
NUMB-212ENST00000554546 ZNF513Q8N8E2 541 aaPredicted RBP13.44□□□□□ -0.26
NUMB-212ENST00000554546 CCDC196A0A1B0GTZ2 297 aa13.44□□□□□ -0.26
NUMB-212ENST00000554546 TERF2IPQ9NYB0 399 aa13.44□□□□□ -0.26
NUMB-212ENST00000554546 KDM2AQ9Y2K7 1162 aa13.44□□□□□ -0.26
NUMB-212ENST00000554546 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.43□□□□□ -0.26
NUMB-212ENST00000554546 MNAT1P51948 309 aa13.43□□□□□ -0.26
NUMB-212ENST00000554546 CEP89Q96ST8 783 aa13.43□□□□□ -0.26
NUMB-212ENST00000554546 SLU7O95391 586 aaKnown RBP13.43□□□□□ -0.26
NUMB-212ENST00000554546 OAS2P29728 719 aaKnown RBP13.43□□□□□ -0.26
NUMB-212ENST00000554546 RABEP1Q15276 862 aa13.43□□□□□ -0.26
NUMB-212ENST00000554546 NBPF6Q5VWK0 638 aa13.43□□□□□ -0.26
NUMB-212ENST00000554546 TBC1D9Q6ZT07 1266 aa13.43□□□□□ -0.26
NUMB-212ENST00000554546 NBPF5PQ86XG9 351 aaPredicted RBP13.43□□□□□ -0.26
NUMB-212ENST00000554546 DNAAF4Q8WXU2 420 aa13.43□□□□□ -0.26
NUMB-212ENST00000554546 NBPF4Q96M43 638 aa13.43□□□□□ -0.26
NUMB-212ENST00000554546 KIF27Q86VH2 1401 aa13.42□□□□□ -0.26
NUMB-212ENST00000554546 RARSP54136 660 aaKnown RBP13.42□□□□□ -0.26
NUMB-212ENST00000554546 JMYQ8N9B5 988 aa13.42□□□□□ -0.26
NUMB-212ENST00000554546 H2AFXP16104 143 aaPredicted RBP13.42□□□□□ -0.26
NUMB-212ENST00000554546 SLC24A3Q9HC58 644 aa13.41□□□□□ -0.26
NUMB-212ENST00000554546 ZNF608Q9ULD9 1512 aaPredicted RBP13.41□□□□□ -0.26
NUMB-212ENST00000554546 LEKR1Q6ZMV7 388 aa13.41□□□□□ -0.26
NUMB-212ENST00000554546 PDRG1Q9NUG6 133 aa13.41□□□□□ -0.26
NUMB-212ENST00000554546 CFAP43Q8NDM7 1665 aa13.41□□□□□ -0.26
NUMB-212ENST00000554546 KDM6BO15054 1643 aa13.41□□□□□ -0.26
NUMB-212ENST00000554546 PCF11O94913 1555 aaKnown RBP13.41□□□□□ -0.26
NUMB-212ENST00000554546 ACTN2P35609 894 aa13.41□□□□□ -0.26
NUMB-212ENST00000554546 TMCO3Q6UWJ1 677 aa13.41□□□□□ -0.26
NUMB-212ENST00000554546 PRPF38AQ8NAV1 312 aaKnown RBP13.41□□□□□ -0.26
NUMB-212ENST00000554546 NRBP1Q9UHY1 535 aa13.41□□□□□ -0.26
NUMB-212ENST00000554546 KNSTRNQ9Y448 316 aa13.41□□□□□ -0.26
NUMB-212ENST00000554546 MRVI1Q9Y6F6 885 aa13.4□□□□□ -0.26
NUMB-212ENST00000554546 MVPQ14764 893 aaKnown RBP13.4□□□□□ -0.26
NUMB-212ENST00000554546 NAIF1Q69YI7 327 aaPredicted RBP13.4□□□□□ -0.26
NUMB-212ENST00000554546 TRDNQ13061 729 aa13.4□□□□□ -0.26
NUMB-212ENST00000554546 PTPN14Q15678 1187 aa13.4□□□□□ -0.26
NUMB-212ENST00000554546 ZKSCAN8Q15776 578 aaPredicted RBP13.4□□□□□ -0.26
NUMB-212ENST00000554546 CCDC183Q5T5S1 534 aa13.4□□□□□ -0.26
NUMB-212ENST00000554546 RNF20Q5VTR2 975 aa13.4□□□□□ -0.26
NUMB-212ENST00000554546 CWC27Q6UX04 472 aaKnown RBP13.4□□□□□ -0.26
NUMB-212ENST00000554546 REXO1L1PQ8IX06 675 aa13.4□□□□□ -0.26
NUMB-212ENST00000554546 ERBB3P21860 1342 aa13.4□□□□□ -0.26
NUMB-212ENST00000554546 FOXR1Q6PIV2 292 aa13.39□□□□□ -0.27
NUMB-212ENST00000554546 KLHL33A6NCF5 533 aa13.39□□□□□ -0.27
NUMB-212ENST00000554546 NEBLO76041 1014 aa13.39□□□□□ -0.27
NUMB-212ENST00000554546 ARHGAP29Q52LW3 1261 aa13.39□□□□□ -0.27
NUMB-212ENST00000554546 PABPN1Q86U42 306 aaKnown RBP eCLIP13.39□□□□□ -0.27
NUMB-212ENST00000554546 TPM1P09493 284 aa13.38□□□□□ -0.27
NUMB-212ENST00000554546 PPP2R1AP30153 589 aa13.38□□□□□ -0.27
NUMB-212ENST00000554546 GIMAP6Q6P9H5 292 aa13.38□□□□□ -0.27
NUMB-212ENST00000554546 CCDC34Q96HJ3 373 aa13.38□□□□□ -0.27
NUMB-212ENST00000554546 EPRSP07814 1512 aaKnown RBP13.38□□□□□ -0.27
NUMB-212ENST00000554546 SEC31AO94979 1220 aaKnown RBP13.38□□□□□ -0.27
NUMB-212ENST00000554546 IVLP07476 585 aa13.38□□□□□ -0.27
NUMB-212ENST00000554546 RBM5P52756 815 aaKnown RBP eCLIP13.38□□□□□ -0.27
NUMB-212ENST00000554546 USP48Q86UV5 1035 aa13.38□□□□□ -0.27
NUMB-212ENST00000554546 USP27XA6NNY8 438 aa13.38□□□□□ -0.27
NUMB-212ENST00000554546 KIF3CO14782 793 aa13.38□□□□□ -0.27
NUMB-212ENST00000554546 BMP2KLQ5H9B9 411 aa13.38□□□□□ -0.27
NUMB-212ENST00000554546 ZSCAN25Q6NSZ9 544 aa13.38□□□□□ -0.27
NUMB-212ENST00000554546 OTUD6BQ8N6M0 293 aa13.38□□□□□ -0.27
NUMB-212ENST00000554546 ADAM21Q9UKJ8 722 aa13.38□□□□□ -0.27
NUMB-212ENST00000554546 SMC2O95347 1197 aa13.37□□□□□ -0.27
NUMB-212ENST00000554546 NEUROD2Q15784 382 aa13.37□□□□□ -0.27
NUMB-212ENST00000554546 MICALL1Q8N3F8 863 aa13.37□□□□□ -0.27
NUMB-212ENST00000554546 TAOK2Q9UL54 1235 aa13.37□□□□□ -0.27
NUMB-212ENST00000554546 CT47B1P0C2W7 299 aaPredicted RBP13.37□□□□□ -0.27
NUMB-212ENST00000554546 C11orf91Q3C1V1 193 aa13.37□□□□□ -0.27
NUMB-212ENST00000554546 TRMT1Q9NXH9 659 aaKnown RBP13.37□□□□□ -0.27
NUMB-212ENST00000554546 SMC1AQ14683 1233 aaKnown RBP13.37□□□□□ -0.27
NUMB-212ENST00000554546 ITFG2Q969R8 447 aa13.37□□□□□ -0.27
NUMB-212ENST00000554546 ARGLU1Q9NWB6 273 aaPredicted RBP13.37□□□□□ -0.27
NUMB-212ENST00000554546 ST18O60284 1047 aa13.36□□□□□ -0.27
NUMB-212ENST00000554546 LIG1P18858 919 aa13.36□□□□□ -0.27
NUMB-212ENST00000554546 HDAC1Q13547 482 aaPredicted RBP13.36□□□□□ -0.27
NUMB-212ENST00000554546 CORO7P57737 925 aa13.36□□□□□ -0.27
NUMB-212ENST00000554546 INHBEP58166 350 aa13.36□□□□□ -0.27
NUMB-212ENST00000554546 PSMD1Q99460 953 aa13.36□□□□□ -0.27
NUMB-212ENST00000554546 USP26Q9BXU7 913 aa13.36□□□□□ -0.27
NUMB-212ENST00000554546 ZSCAN16Q9H4T2 348 aaPredicted RBP13.36□□□□□ -0.27
NUMB-212ENST00000554546 ZRANB2O95218 330 aaKnown RBP eCLIP13.36□□□□□ -0.272e-10■■□□□ 12
NUMB-212ENST00000554546 MX1P20591 662 aa13.36□□□□□ -0.27
NUMB-212ENST00000554546 IQUBQ8NA54 791 aa13.36□□□□□ -0.27
NUMB-212ENST00000554546 LRRN4CLQ8ND94 238 aa13.36□□□□□ -0.27
NUMB-212ENST00000554546 GIMAP7Q8NHV1 300 aa13.36□□□□□ -0.27
NUMB-212ENST00000554546 CFAP65Q6ZU64 1925 aaKnown RBP13.35□□□□□ -0.27
NUMB-212ENST00000554546 CAMSAP2Q08AD1 1489 aa13.35□□□□□ -0.27
NUMB-212ENST00000554546 CASTP20810 708 aaKnown RBP13.35□□□□□ -0.27
NUMB-212ENST00000554546 ZC3H12AQ5D1E8 599 aaKnown RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms