RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 SPATA31A5Q5VU36 1347 aa11.42□□□□□ -0.58
PSEN1-209ENST00000553855 SPATA31A7Q8IWB4 1347 aa11.42□□□□□ -0.58
PSEN1-209ENST00000553855 ZEB1P37275 1124 aaPredicted RBP11.42□□□□□ -0.58
PSEN1-209ENST00000553855 AMPHP49418 695 aa11.42□□□□□ -0.58
PSEN1-209ENST00000553855 FAM98CQ17RN3 349 aaKnown RBP11.42□□□□□ -0.58
PSEN1-209ENST00000553855 TOM1L2Q6ZVM7 507 aa11.42□□□□□ -0.58
PSEN1-209ENST00000553855 SEPT12Q8IYM1 358 aa11.42□□□□□ -0.58
PSEN1-209ENST00000553855 DCBLD2Q96PD2 775 aa11.42□□□□□ -0.58
PSEN1-209ENST00000553855 GGNBP2Q9H3C7 697 aa11.42□□□□□ -0.58
PSEN1-209ENST00000553855 CRYBG1Q9Y4K1 1723 aa11.42□□□□□ -0.58
PSEN1-209ENST00000553855 NSD3Q9BZ95 1437 aa11.42□□□□□ -0.58
PSEN1-209ENST00000553855 FYB1O15117 783 aa11.41□□□□□ -0.58
PSEN1-209ENST00000553855 MS4A3Q96HJ5 214 aa11.41□□□□□ -0.58
PSEN1-209ENST00000553855 PANK3Q9H999 370 aa11.41□□□□□ -0.58
PSEN1-209ENST00000553855 THRAP3Q9Y2W1 955 aaKnown RBP11.41□□□□□ -0.58
PSEN1-209ENST00000553855 KNSTRNQ9Y448 316 aa11.41□□□□□ -0.58
PSEN1-209ENST00000553855 SRCAPQ6ZRS2 3230 aa11.41□□□□□ -0.58
PSEN1-209ENST00000553855 SPATA31A1Q5TZJ5 1347 aa11.4□□□□□ -0.58
PSEN1-209ENST00000553855 PSEN1P49768 467 aa11.4□□□□□ -0.58
PSEN1-209ENST00000553855 LARP1Q6PKG0 1096 aaKnown RBP11.4□□□□□ -0.58
PSEN1-209ENST00000553855 TCP11L2Q8N4U5 519 aa11.4□□□□□ -0.58
PSEN1-209ENST00000553855 OVOS2A0A0J9YW53 1432 aa11.39□□□□□ -0.59
PSEN1-209ENST00000553855 PDE3BQ13370 1112 aa11.39□□□□□ -0.59
PSEN1-209ENST00000553855 OVOS2Q6IE36 1432 aa11.39□□□□□ -0.59
PSEN1-209ENST00000553855 KRT27Q7Z3Y8 459 aa11.39□□□□□ -0.59
PSEN1-209ENST00000553855 KCNV2Q8TDN2 545 aa11.39□□□□□ -0.59
PSEN1-209ENST00000553855 KIF7Q2M1P5 1343 aa11.38□□□□□ -0.59
PSEN1-209ENST00000553855 WDR17Q8IZU2 1322 aa11.38□□□□□ -0.59
PSEN1-209ENST00000553855 CRB1P82279 1406 aa11.38□□□□□ -0.59
PSEN1-209ENST00000553855 ONECUT3O60422 494 aaPredicted RBP11.38□□□□□ -0.59
PSEN1-209ENST00000553855 SF3B2Q13435 895 aaKnown RBP11.38□□□□□ -0.59
PSEN1-209ENST00000553855 CARD14Q9BXL6 1004 aa11.38□□□□□ -0.59
PSEN1-209ENST00000553855 MFRPQ9BY79 579 aa11.38□□□□□ -0.59
PSEN1-209ENST00000553855 NLRP2Q9NX02 1062 aa11.38□□□□□ -0.59
PSEN1-209ENST00000553855 CAMTA1Q9Y6Y1 1673 aa11.38□□□□□ -0.59
PSEN1-209ENST00000553855 COL5A2P05997 1499 aaPredicted RBP11.38□□□□□ -0.59
PSEN1-209ENST00000553855 NFAT5O94916 1531 aa11.37□□□□□ -0.59
PSEN1-209ENST00000553855 BARGINQ6ZT62 677 aa11.37□□□□□ -0.59
PSEN1-209ENST00000553855 IP6K1Q92551 441 aa11.37□□□□□ -0.59
PSEN1-209ENST00000553855 CDCA7Q9BWT1 371 aaPredicted RBP11.37□□□□□ -0.59
PSEN1-209ENST00000553855 AXIN2Q9Y2T1 843 aa11.37□□□□□ -0.59
PSEN1-209ENST00000553855 NRAPQ86VF7 1730 aa11.37□□□□□ -0.59
PSEN1-209ENST00000553855 GLI3P10071 1580 aa11.37□□□□□ -0.59
PSEN1-209ENST00000553855 BLMP54132 1417 aaPredicted RBP11.36□□□□□ -0.59
PSEN1-209ENST00000553855 SMG6Q86US8 1419 aaKnown RBP11.36□□□□□ -0.59
PSEN1-209ENST00000553855 ABCC6O95255 1503 aa11.36□□□□□ -0.59
PSEN1-209ENST00000553855 C11orf95C9JLR9 678 aaPredicted RBP11.36□□□□□ -0.59
PSEN1-209ENST00000553855 CCDC125Q86Z20 511 aa11.36□□□□□ -0.59
PSEN1-209ENST00000553855 ANKRD24Q8TF21 1146 aa11.36□□□□□ -0.59
PSEN1-209ENST00000553855 LTV1Q96GA3 475 aaPredicted RBP11.36□□□□□ -0.59
PSEN1-209ENST00000553855 CARD10Q9BWT7 1032 aa11.36□□□□□ -0.59
PSEN1-209ENST00000553855 NSD2O96028 1365 aa11.36□□□□□ -0.59
PSEN1-209ENST00000553855 MAP3K19Q56UN5 1328 aa11.35□□□□□ -0.59
PSEN1-209ENST00000553855 PPM1GO15355 546 aaPredicted RBP11.35□□□□□ -0.59
PSEN1-209ENST00000553855 RRS1Q15050 365 aaKnown RBP11.35□□□□□ -0.59
PSEN1-209ENST00000553855 MORC1Q86VD1 984 aa11.35□□□□□ -0.59
PSEN1-209ENST00000553855 UPF1Q92900 1129 aaKnown RBP eCLIP11.35□□□□□ -0.59
PSEN1-209ENST00000553855 RTL1A6NKG5 1358 aa11.35□□□□□ -0.59
PSEN1-209ENST00000553855 CCDC7Q96M83 1385 aa11.35□□□□□ -0.59
PSEN1-209ENST00000553855 MYOM1P52179 1685 aa11.35□□□□□ -0.59
PSEN1-209ENST00000553855 USP54Q70EL1 1684 aa11.35□□□□□ -0.59
PSEN1-209ENST00000553855 LMO7Q8WWI1 1683 aa11.35□□□□□ -0.59
PSEN1-209ENST00000553855 ERBB3P21860 1342 aa11.35□□□□□ -0.59
PSEN1-209ENST00000553855 HOXC9P31274 260 aa11.34□□□□□ -0.59
PSEN1-209ENST00000553855 DDB1Q16531 1140 aa11.34□□□□□ -0.59
PSEN1-209ENST00000553855 IFNL1Q8IU54 200 aa11.34□□□□□ -0.59
PSEN1-209ENST00000553855 KIF24Q5T7B8 1368 aa11.33□□□□□ -0.6
PSEN1-209ENST00000553855 EXOC5O00471 708 aa11.33□□□□□ -0.6
PSEN1-209ENST00000553855 TNNT2P45379 298 aaPredicted RBP11.33□□□□□ -0.6
PSEN1-209ENST00000553855 FLT4P35916 1363 aa11.32□□□□□ -0.6
PSEN1-209ENST00000553855 FAM196AQ6ZSG2 479 aa11.32□□□□□ -0.6
PSEN1-209ENST00000553855 KIF20BQ96Q89 1820 aa11.32□□□□□ -0.6
PSEN1-209ENST00000553855 WASHC2AQ641Q2 1341 aa11.32□□□□□ -0.6
PSEN1-209ENST00000553855 IL2RBP14784 551 aa11.31□□□□□ -0.6
PSEN1-209ENST00000553855 FBLN1P23142 703 aa11.31□□□□□ -0.6
PSEN1-209ENST00000553855 EMILIN1Q9Y6C2 1016 aa11.3□□□□□ -0.6
PSEN1-209ENST00000553855 INSRP06213 1382 aa11.29□□□□□ -0.6
PSEN1-209ENST00000553855 LTN1O94822 1766 aa11.29□□□□□ -0.6
PSEN1-209ENST00000553855 COL18A1P39060 1754 aa11.29□□□□□ -0.6
PSEN1-209ENST00000553855 CNGB1Q14028 1251 aaPredicted RBP11.29□□□□□ -0.6
PSEN1-209ENST00000553855 CC2D1BQ5T0F9 858 aaKnown RBP11.29□□□□□ -0.6
PSEN1-209ENST00000553855 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.29□□□□□ -0.6
PSEN1-209ENST00000553855 RAPGEF4Q8WZA2 1011 aa11.29□□□□□ -0.6
PSEN1-209ENST00000553855 BAG6P46379 1132 aa11.28□□□□□ -0.6
PSEN1-209ENST00000553855 HSP90AB2PQ58FF8 381 aa11.28□□□□□ -0.6
PSEN1-209ENST00000553855 FBXO22Q8NEZ5 403 aa11.28□□□□□ -0.6
PSEN1-209ENST00000553855 POLKQ9UBT6 870 aa11.28□□□□□ -0.6
PSEN1-209ENST00000553855 TATP17735 454 aaPredicted RBP11.27□□□□□ -0.61
PSEN1-209ENST00000553855 FAM182BQ5T319 152 aa11.27□□□□□ -0.61
PSEN1-209ENST00000553855 EFCAB3Q8N7B9 438 aa11.27□□□□□ -0.61
PSEN1-209ENST00000553855 TRPC6Q9Y210 931 aa11.27□□□□□ -0.61
PSEN1-209ENST00000553855 THSD7AQ9UPZ6 1657 aa11.27□□□□□ -0.61
PSEN1-209ENST00000553855 OVOS2A0A0G2JMS6 1433 aa11.26□□□□□ -0.61
PSEN1-209ENST00000553855 PPP1R37O75864 691 aa11.26□□□□□ -0.61
PSEN1-209ENST00000553855 FAM208AQ9UK61 1670 aaKnown RBP11.25□□□□□ -0.61
PSEN1-209ENST00000553855 TRIM37O94972 964 aa11.25□□□□□ -0.61
PSEN1-209ENST00000553855 TIE1P35590 1138 aa11.25□□□□□ -0.61
PSEN1-209ENST00000553855 NBPF6Q5VWK0 638 aa11.25□□□□□ -0.61
PSEN1-209ENST00000553855 NBPF4Q96M43 638 aa11.25□□□□□ -0.61
PSEN1-209ENST00000553855 RGPD5Q99666 1765 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms