RNA–Protein interactions for RNA: ENST00000553055.1

PFKM-231, Transcript of phosphofructokinase, muscle, human

TSL 5

Gene PFKM, Length 289 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PFKM-231	ENST00000553055	LOC102724159	A0A0B4J2E5	919 aa		10.11	□□□□□ -0.79
PFKM-231	ENST00000553055	NDUFB5	O43674	189 aa		10.11	□□□□□ -0.79
PFKM-231	ENST00000553055	PRPF40A	O75400	957 aa	Known RBP	10.11	□□□□□ -0.79
PFKM-231	ENST00000553055	PWP2	Q15269	919 aa	Known RBP	10.11	□□□□□ -0.79
PFKM-231	ENST00000553055	ZNF526	Q8TF50	670 aa	Predicted RBP	10.11	□□□□□ -0.79
PFKM-231	ENST00000553055	GPATCH3	Q96I76	525 aa		10.11	□□□□□ -0.79
PFKM-231	ENST00000553055	TRIM6-TRIM34	B2RNG4	842 aa		10.1	□□□□□ -0.79
PFKM-231	ENST00000553055	GALR2	O43603	387 aa	Predicted RBP	10.1	□□□□□ -0.79
PFKM-231	ENST00000553055	FAM13A	O94988	1023 aa		10.1	□□□□□ -0.79
PFKM-231	ENST00000553055	LDHB	P07195	334 aa	Known RBP	10.1	□□□□□ -0.79
PFKM-231	ENST00000553055	FMR1	Q06787	632 aa	Known RBP eCLIP	10.1	□□□□□ -0.79
PFKM-231	ENST00000553055	RNF187	Q5TA31	235 aa	Predicted RBP	10.1	□□□□□ -0.79
PFKM-231	ENST00000553055	TMC7	Q7Z402	723 aa		10.1	□□□□□ -0.79
PFKM-231	ENST00000553055	TMC4	Q7Z404	712 aa		10.1	□□□□□ -0.79
PFKM-231	ENST00000553055	PARP2	Q9UGN5	583 aa		10.1	□□□□□ -0.79
PFKM-231	ENST00000553055	ZNF608	Q9ULD9	1512 aa	Predicted RBP	10.09	□□□□□ -0.79
PFKM-231	ENST00000553055	TREH	O43280	583 aa		10.09	□□□□□ -0.79
PFKM-231	ENST00000553055	COL9A1	P20849	921 aa		10.09	□□□□□ -0.79
PFKM-231	ENST00000553055	ARID5A	Q03989	594 aa		10.09	□□□□□ -0.79
PFKM-231	ENST00000553055	RBL2	Q08999	1139 aa		10.09	□□□□□ -0.79
PFKM-231	ENST00000553055	LYPD8	Q6UX82	237 aa		10.09	□□□□□ -0.79
PFKM-231	ENST00000553055	PHTF2	Q8N3S3	785 aa		10.09	□□□□□ -0.79
PFKM-231	ENST00000553055	ACBD3	Q9H3P7	528 aa		10.09	□□□□□ -0.79
PFKM-231	ENST00000553055	SEPT3	Q9UH03	358 aa		10.09	□□□□□ -0.79
PFKM-231	ENST00000553055	CHIC2	Q9UKJ5	165 aa		10.09	□□□□□ -0.79
PFKM-231	ENST00000553055	SUGT1	Q9Y2Z0	365 aa		10.09	□□□□□ -0.79
PFKM-231	ENST00000553055	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	10.09	□□□□□ -0.79
PFKM-231	ENST00000553055	FANCD2	Q9BXW9	1451 aa		10.09	□□□□□ -0.79
PFKM-231	ENST00000553055	PEG3	Q9GZU2	1588 aa		10.09	□□□□□ -0.79
PFKM-231	ENST00000553055	C3orf80	F5H4A9	247 aa		10.08	□□□□□ -0.8
PFKM-231	ENST00000553055	SEC24B	O95487	1268 aa		10.08	□□□□□ -0.8
PFKM-231	ENST00000553055	SLC10A3	P09131	477 aa		10.08	□□□□□ -0.8
PFKM-231	ENST00000553055	ATP2B2	Q01814	1243 aa		10.08	□□□□□ -0.8
PFKM-231	ENST00000553055	FUT2	Q10981	343 aa		10.08	□□□□□ -0.8
PFKM-231	ENST00000553055	PSMD2	Q13200	908 aa		10.08	□□□□□ -0.8
PFKM-231	ENST00000553055	FBXO41	Q8TF61	875 aa		10.08	□□□□□ -0.8
PFKM-231	ENST00000553055	SYMPK	Q92797	1274 aa	Known RBP	10.08	□□□□□ -0.8
PFKM-231	ENST00000553055	MKNK1	Q9BUB5	465 aa		10.08	□□□□□ -0.8
PFKM-231	ENST00000553055	OSBPL2	Q9H1P3	480 aa		10.08	□□□□□ -0.8
PFKM-231	ENST00000553055	PIF1	Q9H611	641 aa		10.08	□□□□□ -0.8
PFKM-231	ENST00000553055	EPB41L3	Q9Y2J2	1087 aa	Predicted RBP	10.08	□□□□□ -0.8
PFKM-231	ENST00000553055	NOP58	Q9Y2X3	529 aa	Known RBP	10.08	□□□□□ -0.8
PFKM-231	ENST00000553055	GPSM3	Q9Y4H4	160 aa		10.08	□□□□□ -0.8
PFKM-231	ENST00000553055	PCDHB9	Q9Y5E1	797 aa		10.08	□□□□□ -0.8
PFKM-231	ENST00000553055	URB2	Q14146	1524 aa	Known RBP	10.07	□□□□□ -0.8
PFKM-231	ENST00000553055	ATMIN	O43313	823 aa	Predicted RBP	10.07	□□□□□ -0.8
PFKM-231	ENST00000553055	TPD52L2	O43399	206 aa	Known RBP	10.07	□□□□□ -0.8
PFKM-231	ENST00000553055	MTMR3	Q13615	1198 aa		10.07	□□□□□ -0.8
PFKM-231	ENST00000553055	TRAF7	Q6Q0C0	670 aa		10.07	□□□□□ -0.8
PFKM-231	ENST00000553055	TICAM2	Q86XR7	235 aa		10.07	□□□□□ -0.8
PFKM-231	ENST00000553055	NLGN1	Q8N2Q7	840 aa		10.07	□□□□□ -0.8
PFKM-231	ENST00000553055	CITED4	Q96RK1	184 aa		10.07	□□□□□ -0.8
PFKM-231	ENST00000553055	KLHL42	Q9P2K6	505 aa		10.07	□□□□□ -0.8
PFKM-231	ENST00000553055	LMTK3	Q96Q04	1460 aa		10.06	□□□□□ -0.8
PFKM-231	ENST00000553055	HSD3B2	P26439	372 aa		10.06	□□□□□ -0.8
PFKM-231	ENST00000553055	ATP6V1A	P38606	617 aa		10.06	□□□□□ -0.8
PFKM-231	ENST00000553055	CLCN6	P51797	869 aa		10.06	□□□□□ -0.8
PFKM-231	ENST00000553055	PTK2	Q05397	1052 aa		10.06	□□□□□ -0.8
PFKM-231	ENST00000553055	CCDC102B	Q68D86	513 aa		10.06	□□□□□ -0.8
PFKM-231	ENST00000553055	HELQ	Q8TDG4	1101 aa		10.06	□□□□□ -0.8
PFKM-231	ENST00000553055	TMC1	Q8TDI8	760 aa		10.06	□□□□□ -0.8
PFKM-231	ENST00000553055	FAM161B	Q96MY7	647 aa		10.06	□□□□□ -0.8
PFKM-231	ENST00000553055	DUSP9	Q99956	384 aa	Known RBP	10.06	□□□□□ -0.8
PFKM-231	ENST00000553055	HINFP	Q9BQA5	517 aa		10.06	□□□□□ -0.8
PFKM-231	ENST00000553055	INPP5F	Q9Y2H2	1132 aa		10.06	□□□□□ -0.8
PFKM-231	ENST00000553055	STK10	O94804	968 aa	Known RBP	10.05	□□□□□ -0.8
PFKM-231	ENST00000553055	DKK1	O94907	266 aa		10.05	□□□□□ -0.8
PFKM-231	ENST00000553055	MAPK8	P45983	427 aa		10.05	□□□□□ -0.8
PFKM-231	ENST00000553055	GTF2I	P78347	998 aa		10.05	□□□□□ -0.8
PFKM-231	ENST00000553055	DAB2	P98082	770 aa		10.05	□□□□□ -0.8
PFKM-231	ENST00000553055	PDE3B	Q13370	1112 aa		10.05	□□□□□ -0.8
PFKM-231	ENST00000553055	HSP90AB2P	Q58FF8	381 aa		10.05	□□□□□ -0.8
PFKM-231	ENST00000553055	ASTL	Q6HA08	431 aa	Predicted RBP	10.05	□□□□□ -0.8
PFKM-231	ENST00000553055	ZNF746	Q6NUN9	644 aa	Predicted RBP	10.05	□□□□□ -0.8
PFKM-231	ENST00000553055	VPS37D	Q86XT2	251 aa		10.05	□□□□□ -0.8
PFKM-231	ENST00000553055	BCCIP	Q9P287	314 aa	Known RBP eCLIP	10.05	□□□□□ -0.8
PFKM-231	ENST00000553055	SMAP	O00193	183 aa		10.04	□□□□□ -0.8
PFKM-231	ENST00000553055	TCEAL1	Q15170	157 aa		10.04	□□□□□ -0.8
PFKM-231	ENST00000553055	NFE2L2	Q16236	605 aa		10.04	□□□□□ -0.8
PFKM-231	ENST00000553055		Q3C1V9	767 aa		10.04	□□□□□ -0.8
PFKM-231	ENST00000553055	PPP1R18	Q6NYC8	613 aa		10.04	□□□□□ -0.8
PFKM-231	ENST00000553055	CHRDL2	Q6WN34	429 aa		10.04	□□□□□ -0.8
PFKM-231	ENST00000553055	TPCN2	Q8NHX9	752 aa		10.04	□□□□□ -0.8
PFKM-231	ENST00000553055	COL26A1	Q96A83	441 aa		10.04	□□□□□ -0.8
PFKM-231	ENST00000553055	DMRTB1	Q96MA1	342 aa		10.04	□□□□□ -0.8
PFKM-231	ENST00000553055	DOLK	Q9UPQ8	538 aa		10.04	□□□□□ -0.8
PFKM-231	ENST00000553055	KIAA1024	Q9UPX6	916 aa		10.04	□□□□□ -0.8
PFKM-231	ENST00000553055	C19orf67	A6NJJ6	358 aa		10.03	□□□□□ -0.8
PFKM-231	ENST00000553055	PTPRE	P23469	700 aa		10.03	□□□□□ -0.8
PFKM-231	ENST00000553055	TNNI2	P48788	182 aa		10.03	□□□□□ -0.8
PFKM-231	ENST00000553055	HDGF	P51858	240 aa	Known RBP	10.03	□□□□□ -0.8
PFKM-231	ENST00000553055	PLCB3	Q01970	1234 aa		10.03	□□□□□ -0.8
PFKM-231	ENST00000553055	PSME1	Q06323	249 aa		10.03	□□□□□ -0.8
PFKM-231	ENST00000553055	PPP4R3B	Q5MIZ7	849 aa		10.03	□□□□□ -0.8
PFKM-231	ENST00000553055	PRKD2	Q9BZL6	878 aa		10.03	□□□□□ -0.8
PFKM-231	ENST00000553055	BCL2L12	Q9HB09	334 aa		10.03	□□□□□ -0.8
PFKM-231	ENST00000553055	MAGEC2	Q9UBF1	373 aa	Predicted RBP	10.03	□□□□□ -0.8
PFKM-231	ENST00000553055	ZBTB7B	O15156	539 aa	Predicted RBP	10.02	□□□□□ -0.81
PFKM-231	ENST00000553055	NPR3	P17342	541 aa		10.02	□□□□□ -0.81
PFKM-231	ENST00000553055	EXOC8	Q8IYI6	725 aa		10.02	□□□□□ -0.81

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