RNA–Protein interactions for RNA: ENST00000545848.5

LDHC-209, Transcript of lactate dehydrogenase C, humanhuman

TSL 1 (best)

Gene LDHC, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHC-209ENST00000545848 PLEKHG1Q9ULL1 1385 aa9.52□□□□□ -0.88
LDHC-209ENST00000545848 CFHP08603 1231 aa9.52□□□□□ -0.89
LDHC-209ENST00000545848 DIP2AQ14689 1571 aa9.52□□□□□ -0.89
LDHC-209ENST00000545848 SPATA31E1Q6ZUB1 1445 aa9.52□□□□□ -0.89
LDHC-209ENST00000545848 SETD5Q9C0A6 1442 aa9.51□□□□□ -0.89
LDHC-209ENST00000545848 ZPR1O75312 459 aa9.51□□□□□ -0.89
LDHC-209ENST00000545848 SLC10A3P09131 477 aa9.51□□□□□ -0.89
LDHC-209ENST00000545848 KMT5BQ4FZB7 885 aa9.51□□□□□ -0.89
LDHC-209ENST00000545848 BLOC1S3Q6QNY0 202 aa9.51□□□□□ -0.89
LDHC-209ENST00000545848 METP08581 1390 aa9.5□□□□□ -0.89
LDHC-209ENST00000545848 NKTRP30414 1462 aaKnown RBP9.49□□□□□ -0.89
LDHC-209ENST00000545848 KNDC1Q76NI1 1749 aa9.49□□□□□ -0.89
LDHC-209ENST00000545848 ACTN4O43707 911 aaKnown RBP9.49□□□□□ -0.89
LDHC-209ENST00000545848 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.49□□□□□ -0.89
LDHC-209ENST00000545848 RGPD8O14715 1765 aaPredicted RBP9.49□□□□□ -0.89
LDHC-209ENST00000545848 TRIM52Q96A61 297 aa9.48□□□□□ -0.89
LDHC-209ENST00000545848 SLC52A1Q9NWF4 448 aa9.48□□□□□ -0.89
LDHC-209ENST00000545848 TMEM94Q12767 1356 aa9.48□□□□□ -0.89
LDHC-209ENST00000545848 COL16A1Q07092 1604 aaPredicted RBP9.47□□□□□ -0.89
LDHC-209ENST00000545848 MED1Q15648 1581 aaPredicted RBP9.46□□□□□ -0.89
LDHC-209ENST00000545848 TULP1O00294 542 aaPredicted RBP9.46□□□□□ -0.9
LDHC-209ENST00000545848 GGCXP38435 758 aa9.46□□□□□ -0.9
LDHC-209ENST00000545848 MPHOSPH9Q99550 1183 aa9.46□□□□□ -0.9
LDHC-209ENST00000545848 PHLPP1O60346 1717 aa9.45□□□□□ -0.9
LDHC-209ENST00000545848 UBAP1LF5GYI3 381 aa9.45□□□□□ -0.9
LDHC-209ENST00000545848 KCNA6P17658 529 aa9.45□□□□□ -0.9
LDHC-209ENST00000545848 NLRP7Q8WX94 980 aa9.45□□□□□ -0.9
LDHC-209ENST00000545848 PRKD2Q9BZL6 878 aa9.45□□□□□ -0.9
LDHC-209ENST00000545848 DAXXQ9UER7 740 aaPredicted RBP9.45□□□□□ -0.9
LDHC-209ENST00000545848 ADGRF5Q8IZF2 1346 aa9.45□□□□□ -0.9
LDHC-209ENST00000545848 NRXN1Q9ULB1 1477 aa9.45□□□□□ -0.9
LDHC-209ENST00000545848 NHSL1Q5SYE7 1610 aa9.45□□□□□ -0.9
LDHC-209ENST00000545848 TLL1O43897 1013 aa9.44□□□□□ -0.9
LDHC-209ENST00000545848 HSPA1LP34931 641 aa9.44□□□□□ -0.9
LDHC-209ENST00000545848 PHOX2BQ99453 314 aa9.44□□□□□ -0.9
LDHC-209ENST00000545848 ARHGEF28Q8N1W1 1705 aaKnown RBP9.43□□□□□ -0.9
LDHC-209ENST00000545848 USP32Q8NFA0 1604 aa9.43□□□□□ -0.9
LDHC-209ENST00000545848 ADGRB1O14514 1584 aa9.43□□□□□ -0.9
LDHC-209ENST00000545848 PIK3C2GO75747 1445 aa9.43□□□□□ -0.9
LDHC-209ENST00000545848 ANKRD30BQ9BXX2 1392 aa9.43□□□□□ -0.9
LDHC-209ENST00000545848 PIP4K2BP78356 416 aa9.43□□□□□ -0.9
LDHC-209ENST00000545848 ROBO2Q9HCK4 1378 aa9.42□□□□□ -0.9
LDHC-209ENST00000545848 RDH13Q8NBN7 331 aa9.42□□□□□ -0.9
LDHC-209ENST00000545848 TMUB1Q9BVT8 246 aa9.42□□□□□ -0.9
LDHC-209ENST00000545848 EID1Q9Y6B2 187 aa9.42□□□□□ -0.9
LDHC-209ENST00000545848 V9GY48 417 aaPredicted RBP9.42□□□□□ -0.9
LDHC-209ENST00000545848 FMN2Q9NZ56 1722 aa9.42□□□□□ -0.9
LDHC-209ENST00000545848 CCDC144AA2RUR9 1427 aa9.41□□□□□ -0.9
LDHC-209ENST00000545848 DHX57Q6P158 1386 aaKnown RBP9.41□□□□□ -0.9
LDHC-209ENST00000545848 PLEKHH1Q9ULM0 1364 aa9.41□□□□□ -0.9
LDHC-209ENST00000545848 DDX11L8A8MPP1 907 aa9.41□□□□□ -0.9
LDHC-209ENST00000545848 MYOM2P54296 1465 aa9.4□□□□□ -0.9
LDHC-209ENST00000545848 NR1I2O75469 434 aa9.4□□□□□ -0.9
LDHC-209ENST00000545848 PPP1R15AO75807 674 aaPredicted RBP9.4□□□□□ -0.9
LDHC-209ENST00000545848 MAP2K5Q13163 448 aa9.4□□□□□ -0.9
LDHC-209ENST00000545848 PUS10Q3MIT2 529 aaKnown RBP9.4□□□□□ -0.9
LDHC-209ENST00000545848 LAMC1P11047 1609 aa9.4□□□□□ -0.9
LDHC-209ENST00000545848 MST1RQ04912 1400 aa9.39□□□□□ -0.91
LDHC-209ENST00000545848 PRAG1Q86YV5 1406 aa9.39□□□□□ -0.91
LDHC-209ENST00000545848 LRP6O75581 1613 aa9.39□□□□□ -0.91
LDHC-209ENST00000545848 RNF223E7ERA6 249 aa9.39□□□□□ -0.91
LDHC-209ENST00000545848 ZNF326Q5BKZ1 582 aaKnown RBP9.39□□□□□ -0.91
LDHC-209ENST00000545848 ILDR2Q71H61 639 aa9.39□□□□□ -0.91
LDHC-209ENST00000545848 SULF1Q8IWU6 871 aa9.39□□□□□ -0.91
LDHC-209ENST00000545848 AHDC1Q5TGY3 1603 aaPredicted RBP9.38□□□□□ -0.91
LDHC-209ENST00000545848 RGL3Q3MIN7 710 aa9.38□□□□□ -0.91
LDHC-209ENST00000545848 SCUBE3Q8IX30 993 aa9.38□□□□□ -0.91
LDHC-209ENST00000545848 TBX22Q9Y458 520 aa9.38□□□□□ -0.91
LDHC-209ENST00000545848 SHPRHQ149N8 1683 aa9.37□□□□□ -0.91
LDHC-209ENST00000545848 S1PR4O95977 384 aa9.37□□□□□ -0.91
LDHC-209ENST00000545848 ADH1BP00325 375 aa9.37□□□□□ -0.91
LDHC-209ENST00000545848 Q6ZNB5 142 aa9.37□□□□□ -0.91
LDHC-209ENST00000545848 PROSER2Q86WR7 435 aaPredicted RBP9.37□□□□□ -0.91
LDHC-209ENST00000545848 AMOTL2Q9Y2J4 779 aa9.37□□□□□ -0.91
LDHC-209ENST00000545848 PTCH1Q13635 1447 aa9.37□□□□□ -0.91
LDHC-209ENST00000545848 ADGRL3Q9HAR2 1447 aa9.37□□□□□ -0.91
LDHC-209ENST00000545848 CDC42BPGQ6DT37 1551 aa9.37□□□□□ -0.91
LDHC-209ENST00000545848 ABCA3Q99758 1704 aa9.36□□□□□ -0.91
LDHC-209ENST00000545848 TRPM1Q7Z4N2 1603 aa9.36□□□□□ -0.91
LDHC-209ENST00000545848 IRF6O14896 467 aa9.36□□□□□ -0.91
LDHC-209ENST00000545848 GFRA3O60609 400 aa9.36□□□□□ -0.91
LDHC-209ENST00000545848 FUT2Q10981 343 aa9.36□□□□□ -0.91
LDHC-209ENST00000545848 LAPTM4AQ15012 233 aa9.36□□□□□ -0.91
LDHC-209ENST00000545848 DDX17Q92841 729 aaKnown RBP9.36□□□□□ -0.91
LDHC-209ENST00000545848 BCANQ96GW7 911 aa9.36□□□□□ -0.91
LDHC-209ENST00000545848 PIK3R4Q99570 1358 aa9.36□□□□□ -0.91
LDHC-209ENST00000545848 TECPR2O15040 1411 aa9.35□□□□□ -0.91
LDHC-209ENST00000545848 SLC24A1O60721 1099 aa9.35□□□□□ -0.91
LDHC-209ENST00000545848 GCGRP47871 477 aa9.35□□□□□ -0.91
LDHC-209ENST00000545848 TMEM132EQ6IEE7 984 aa9.35□□□□□ -0.91
LDHC-209ENST00000545848 CRYBG1Q9Y4K1 1723 aa9.34□□□□□ -0.91
LDHC-209ENST00000545848 MORN1Q5T089 497 aa9.34□□□□□ -0.91
LDHC-209ENST00000545848 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.34□□□□□ -0.91
LDHC-209ENST00000545848 ANKLE1Q8NAG6 615 aa9.34□□□□□ -0.91
LDHC-209ENST00000545848 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.34□□□□□ -0.91
LDHC-209ENST00000545848 KIAA1210Q9ULL0 1709 aa9.34□□□□□ -0.92
LDHC-209ENST00000545848 MINK1Q8N4C8 1332 aaPredicted RBP9.33□□□□□ -0.92
LDHC-209ENST00000545848 TOPAZ1Q8N9V7 1692 aa9.33□□□□□ -0.92
LDHC-209ENST00000545848 FAM135BQ49AJ0 1406 aa9.33□□□□□ -0.92
LDHC-209ENST00000545848 PPEF1O14829 653 aaPredicted RBP9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms