RNA–Protein interactions for RNA: ENST00000541589.5

LMO3-226, Transcript of LIM domain only 3, humanhuman

TSL 2

Gene LMO3, Length 1,499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-226ENST00000541589 ZBTB7AO95365 584 aa11.25□□□□□ -0.61
LMO3-226ENST00000541589 CENPBP07199 599 aaPredicted RBP11.25□□□□□ -0.61
LMO3-226ENST00000541589 EVA1CP58658 441 aa11.25□□□□□ -0.61
LMO3-226ENST00000541589 ZNF467Q7Z7K2 595 aaPredicted RBP11.25□□□□□ -0.61
LMO3-226ENST00000541589 TMEM106CQ9BVX2 250 aa11.25□□□□□ -0.61
LMO3-226ENST00000541589 FHDC1Q9C0D6 1143 aaPredicted RBP11.25□□□□□ -0.61
LMO3-226ENST00000541589 PARP4Q9UKK3 1724 aaKnown RBP11.24□□□□□ -0.61
LMO3-226ENST00000541589 KIAA1210Q9ULL0 1709 aa11.24□□□□□ -0.61
LMO3-226ENST00000541589 LMO7Q8WWI1 1683 aa11.24□□□□□ -0.61
LMO3-226ENST00000541589 ADGRB1O14514 1584 aa11.24□□□□□ -0.61
LMO3-226ENST00000541589 ATP7BP35670 1465 aa11.24□□□□□ -0.61
LMO3-226ENST00000541589 OVOS2A0A0G2JMS6 1433 aa11.24□□□□□ -0.61
LMO3-226ENST00000541589 OVOS2A0A0J9YW53 1432 aa11.24□□□□□ -0.61
LMO3-226ENST00000541589 OVOS2Q6IE36 1432 aa11.24□□□□□ -0.61
LMO3-226ENST00000541589 CPDO75976 1380 aa11.24□□□□□ -0.61
LMO3-226ENST00000541589 CEP350Q5VT06 3117 aa11.23□□□□□ -0.61
LMO3-226ENST00000541589 MINK1Q8N4C8 1332 aaPredicted RBP11.23□□□□□ -0.61
LMO3-226ENST00000541589 NBPF1Q3BBV0 1214 aa11.23□□□□□ -0.61
LMO3-226ENST00000541589 PTF1AQ7RTS3 328 aa11.23□□□□□ -0.61
LMO3-226ENST00000541589 CHD4Q14839 1912 aa11.22□□□□□ -0.61
LMO3-226ENST00000541589 ST20-MTHFSA0A0A6YYL1 179 aa11.22□□□□□ -0.61
LMO3-226ENST00000541589 CCER2I3L3R5 266 aa11.22□□□□□ -0.61
LMO3-226ENST00000541589 BCL11BQ9C0K0 894 aaPredicted RBP11.22□□□□□ -0.61
LMO3-226ENST00000541589 TRIM35Q9UPQ4 493 aa11.22□□□□□ -0.61
LMO3-226ENST00000541589 TRAK1Q9UPV9 953 aa11.21□□□□□ -0.61
LMO3-226ENST00000541589 BCL9O00512 1426 aa11.21□□□□□ -0.62
LMO3-226ENST00000541589 MAP3K5Q99683 1374 aa11.21□□□□□ -0.62
LMO3-226ENST00000541589 USP19O94966 1318 aa11.2□□□□□ -0.62
LMO3-226ENST00000541589 POTEFA5A3E0 1075 aa11.2□□□□□ -0.62
LMO3-226ENST00000541589 NUTM2GQ5VZR2 741 aa11.2□□□□□ -0.62
LMO3-226ENST00000541589 SBF2Q86WG5 1849 aa11.2□□□□□ -0.62
LMO3-226ENST00000541589 COL5A2P05997 1499 aaPredicted RBP11.2□□□□□ -0.62
LMO3-226ENST00000541589 POLR3AO14802 1390 aaPredicted RBP11.2□□□□□ -0.62
LMO3-226ENST00000541589 SLC15A2Q16348 729 aa11.19□□□□□ -0.62
LMO3-226ENST00000541589 NUDT16Q96DE0 195 aaKnown RBP11.19□□□□□ -0.62
LMO3-226ENST00000541589 YTHDC1Q96MU7 727 aaKnown RBP11.19□□□□□ -0.62
LMO3-226ENST00000541589 MTFR1LQ9H019 292 aa11.19□□□□□ -0.62
LMO3-226ENST00000541589 GIGYF1O75420 1035 aaPredicted RBP11.19□□□□□ -0.62
LMO3-226ENST00000541589 CDAN1Q8IWY9 1227 aa11.19□□□□□ -0.62
LMO3-226ENST00000541589 CRB1P82279 1406 aa11.18□□□□□ -0.62
LMO3-226ENST00000541589 LRRC37A3O60309 1634 aa11.18□□□□□ -0.62
LMO3-226ENST00000541589 STK32BQ9NY57 414 aa11.18□□□□□ -0.62
LMO3-226ENST00000541589 AATKQ6ZMQ8 1374 aa11.17□□□□□ -0.62
LMO3-226ENST00000541589 DDB1Q16531 1140 aa11.17□□□□□ -0.62
LMO3-226ENST00000541589 TXNRD1Q16881 649 aa11.17□□□□□ -0.62
LMO3-226ENST00000541589 MARCH10Q8NA82 808 aaPredicted RBP11.17□□□□□ -0.62
LMO3-226ENST00000541589 ACEP12821 1306 aa11.16□□□□□ -0.62
LMO3-226ENST00000541589 ITSN1Q15811 1721 aa11.16□□□□□ -0.62
LMO3-226ENST00000541589 GCP02774 474 aa11.16□□□□□ -0.62
LMO3-226ENST00000541589 IER5LQ5T953 404 aa11.16□□□□□ -0.62
LMO3-226ENST00000541589 ARXQ96QS3 562 aa11.16□□□□□ -0.62
LMO3-226ENST00000541589 TESK2Q96S53 571 aa11.16□□□□□ -0.62
LMO3-226ENST00000541589 PLEKHG3A1L390 1219 aa11.15□□□□□ -0.62
LMO3-226ENST00000541589 MAMSTRQ6ZN01 415 aa11.15□□□□□ -0.62
LMO3-226ENST00000541589 ABTB2Q8N961 1025 aa11.15□□□□□ -0.62
LMO3-226ENST00000541589 COLQQ9Y215 455 aaPredicted RBP11.15□□□□□ -0.62
LMO3-226ENST00000541589 PSEN1P49768 467 aa11.14□□□□□ -0.63
LMO3-226ENST00000541589 POLR3GLQ9BT43 218 aa11.14□□□□□ -0.63
LMO3-226ENST00000541589 TMF1P82094 1093 aa11.13□□□□□ -0.63
LMO3-226ENST00000541589 NLRP13Q86W25 1043 aa11.13□□□□□ -0.63
LMO3-226ENST00000541589 TOPAZ1Q8N9V7 1692 aa11.13□□□□□ -0.63
LMO3-226ENST00000541589 GOLGB1Q14789 3259 aaKnown RBP11.13□□□□□ -0.63
LMO3-226ENST00000541589 SHANK3Q9BYB0 1731 aa11.13□□□□□ -0.63
LMO3-226ENST00000541589 PDAP1Q13442 181 aaKnown RBP11.12□□□□□ -0.63
LMO3-226ENST00000541589 GPR162Q16538 588 aa11.12□□□□□ -0.63
LMO3-226ENST00000541589 CDK19Q9BWU1 502 aa11.12□□□□□ -0.63
LMO3-226ENST00000541589 PRKRIP1Q9H875 184 aaPredicted RBP11.12□□□□□ -0.63
LMO3-226ENST00000541589 SLC24A1O60721 1099 aa11.12□□□□□ -0.63
LMO3-226ENST00000541589 CDCA7Q9BWT1 371 aaPredicted RBP11.12□□□□□ -0.63
LMO3-226ENST00000541589 PAPPAQ13219 1627 aa11.11□□□□□ -0.63
LMO3-226ENST00000541589 TOM1L2Q6ZVM7 507 aa11.11□□□□□ -0.63
LMO3-226ENST00000541589 RNF25Q96BH1 459 aaPredicted RBP11.11□□□□□ -0.63
LMO3-226ENST00000541589 CDCA8Q53HL2 280 aa11.1□□□□□ -0.63
LMO3-226ENST00000541589 AXIN2Q9Y2T1 843 aa11.1□□□□□ -0.63
LMO3-226ENST00000541589 ARHGEF28Q8N1W1 1705 aaKnown RBP11.1□□□□□ -0.63
LMO3-226ENST00000541589 WDR17Q8IZU2 1322 aa11.1□□□□□ -0.63
LMO3-226ENST00000541589 COL18A1P39060 1754 aa11.1□□□□□ -0.63
LMO3-226ENST00000541589 WNK3Q9BYP7 1800 aa11.09□□□□□ -0.63
LMO3-226ENST00000541589 SLIT3O75094 1523 aa11.09□□□□□ -0.63
LMO3-226ENST00000541589 SEC24BO95487 1268 aa11.09□□□□□ -0.63
LMO3-226ENST00000541589 BRD4O60885 1362 aaPredicted RBP11.09□□□□□ -0.63
LMO3-226ENST00000541589 KTN1Q86UP2 1357 aaKnown RBP11.09□□□□□ -0.63
LMO3-226ENST00000541589 SBNO2Q9Y2G9 1366 aa11.09□□□□□ -0.63
LMO3-226ENST00000541589 IRX5P78411 483 aaPredicted RBP11.08□□□□□ -0.64
LMO3-226ENST00000541589 AKAP12Q02952 1782 aa11.08□□□□□ -0.64
LMO3-226ENST00000541589 ZNF827Q17R98 1081 aa11.07□□□□□ -0.64
LMO3-226ENST00000541589 CARD10Q9BWT7 1032 aa11.07□□□□□ -0.64
LMO3-226ENST00000541589 COL24A1Q17RW2 1714 aa11.07□□□□□ -0.64
LMO3-226ENST00000541589 SLC16A10Q8TF71 515 aa11.06□□□□□ -0.64
LMO3-226ENST00000541589 EXOC5O00471 708 aa11.06□□□□□ -0.64
LMO3-226ENST00000541589 RIOK3O14730 519 aaKnown RBP11.06□□□□□ -0.64
LMO3-226ENST00000541589 HSPA6P17066 643 aa11.06□□□□□ -0.64
LMO3-226ENST00000541589 NLRP6P59044 892 aa11.06□□□□□ -0.64
LMO3-226ENST00000541589 NLGN2Q8NFZ4 835 aa11.06□□□□□ -0.64
LMO3-226ENST00000541589 LRRC4BQ9NT99 713 aa11.06□□□□□ -0.64
LMO3-226ENST00000541589 CENPJQ9HC77 1338 aaPredicted RBP11.05□□□□□ -0.64
LMO3-226ENST00000541589 NHSQ6T4R5 1651 aa11.05□□□□□ -0.64
LMO3-226ENST00000541589 ZBTB7CA1YPR0 619 aa11.05□□□□□ -0.64
LMO3-226ENST00000541589 YBX3P16989 372 aaKnown RBP eCLIP11.05□□□□□ -0.64
LMO3-226ENST00000541589 ARHGEF25Q86VW2 580 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms