RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-223ENST00000534442 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.88□□□□□ -1.15
ECHDC1-223ENST00000534442 NPHP4O75161 1426 aaPredicted RBP7.88□□□□□ -1.15
ECHDC1-223ENST00000534442 SOWAHBA6NEL2 793 aa7.88□□□□□ -1.15
ECHDC1-223ENST00000534442 HSPA6P17066 643 aa7.88□□□□□ -1.15
ECHDC1-223ENST00000534442 APLP1P51693 650 aa7.88□□□□□ -1.15
ECHDC1-223ENST00000534442 VAC14Q08AM6 782 aa7.88□□□□□ -1.15
ECHDC1-223ENST00000534442 WASHC4Q2M389 1173 aa7.88□□□□□ -1.15
ECHDC1-223ENST00000534442 Q3C1V9 767 aa7.88□□□□□ -1.15
ECHDC1-223ENST00000534442 DESI1Q6ICB0 168 aa7.88□□□□□ -1.15
ECHDC1-223ENST00000534442 BLOC1S3Q6QNY0 202 aa7.88□□□□□ -1.15
ECHDC1-223ENST00000534442 RNF19BQ6ZMZ0 732 aa7.88□□□□□ -1.15
ECHDC1-223ENST00000534442 NECTIN2Q92692 538 aa7.88□□□□□ -1.15
ECHDC1-223ENST00000534442 SHPRHQ149N8 1683 aa7.88□□□□□ -1.15
ECHDC1-223ENST00000534442 SCAF11Q99590 1463 aaKnown RBP7.87□□□□□ -1.15
ECHDC1-223ENST00000534442 MROH2AA6NES4 1674 aa7.87□□□□□ -1.15
ECHDC1-223ENST00000534442 PDIA4P13667 645 aaKnown RBP7.87□□□□□ -1.15
ECHDC1-223ENST00000534442 BCAMP50895 628 aa7.87□□□□□ -1.15
ECHDC1-223ENST00000534442 BRICD5Q6PL45 260 aa7.87□□□□□ -1.15
ECHDC1-223ENST00000534442 ANKK1Q8NFD2 765 aa7.87□□□□□ -1.15
ECHDC1-223ENST00000534442 PODXL2Q9NZ53 605 aa7.87□□□□□ -1.15
ECHDC1-223ENST00000534442 HPS5Q9UPZ3 1129 aa7.87□□□□□ -1.15
ECHDC1-223ENST00000534442 A2ML1A8K2U0 1454 aa7.87□□□□□ -1.15
ECHDC1-223ENST00000534442 ZMYM3Q14202 1370 aa7.86□□□□□ -1.15
ECHDC1-223ENST00000534442 PPP4CP60510 307 aa7.86□□□□□ -1.15
ECHDC1-223ENST00000534442 LYPD8Q6UX82 237 aa7.86□□□□□ -1.15
ECHDC1-223ENST00000534442 ANKRD13DQ6ZTN6 518 aa7.86□□□□□ -1.15
ECHDC1-223ENST00000534442 PRR14Q9BWN1 585 aa7.86□□□□□ -1.15
ECHDC1-223ENST00000534442 LRRC9Q6ZRR7 1453 aa7.86□□□□□ -1.15
ECHDC1-223ENST00000534442 NINLQ9Y2I6 1382 aa7.85□□□□□ -1.15
ECHDC1-223ENST00000534442 SF3B2Q13435 895 aaKnown RBP7.85□□□□□ -1.15
ECHDC1-223ENST00000534442 THAP11Q96EK4 314 aa7.85□□□□□ -1.15
ECHDC1-223ENST00000534442 ALG2Q9H553 416 aa7.85□□□□□ -1.15
ECHDC1-223ENST00000534442 SALL2Q9Y467 1007 aaPredicted RBP7.85□□□□□ -1.15
ECHDC1-223ENST00000534442 IQGAP1P46940 1657 aa7.85□□□□□ -1.15
ECHDC1-223ENST00000534442 TNS2Q63HR2 1409 aa7.85□□□□□ -1.15
ECHDC1-223ENST00000534442 MED14O60244 1454 aa7.84□□□□□ -1.15
ECHDC1-223ENST00000534442 GOLGA8CPA6NN73 597 aa7.84□□□□□ -1.15
ECHDC1-223ENST00000534442 ANKLE2Q86XL3 938 aa7.84□□□□□ -1.15
ECHDC1-223ENST00000534442 SCUBE3Q8IX30 993 aa7.84□□□□□ -1.15
ECHDC1-223ENST00000534442 C8orf37Q96NL8 207 aa7.84□□□□□ -1.15
ECHDC1-223ENST00000534442 USB1Q9BQ65 265 aaKnown RBP7.84□□□□□ -1.15
ECHDC1-223ENST00000534442 PPP1R1BQ9UD71 204 aaPredicted RBP7.84□□□□□ -1.15
ECHDC1-223ENST00000534442 TSR3Q9UJK0 312 aaKnown RBP7.84□□□□□ -1.15
ECHDC1-223ENST00000534442 CHD4Q14839 1912 aa7.84□□□□□ -1.16
ECHDC1-223ENST00000534442 WNT2BQ93097 391 aa7.83□□□□□ -1.16
ECHDC1-223ENST00000534442 STAC3Q96MF2 364 aa7.83□□□□□ -1.16
ECHDC1-223ENST00000534442 TRAIPQ9BWF2 469 aa7.83□□□□□ -1.16
ECHDC1-223ENST00000534442 WWC3Q9ULE0 1092 aa7.83□□□□□ -1.16
ECHDC1-223ENST00000534442 ADGBQ8N7X0 1667 aa7.83□□□□□ -1.16
ECHDC1-223ENST00000534442 ATP10BO94823 1461 aa7.82□□□□□ -1.16
ECHDC1-223ENST00000534442 PPP1R15AO75807 674 aaPredicted RBP7.82□□□□□ -1.16
ECHDC1-223ENST00000534442 CFAP70Q5T0N1 1121 aa7.82□□□□□ -1.16
ECHDC1-223ENST00000534442 RETREG2Q8NC44 543 aa7.82□□□□□ -1.16
ECHDC1-223ENST00000534442 SCAPERQ9BY12 1400 aa7.82□□□□□ -1.16
ECHDC1-223ENST00000534442 REREQ9P2R6 1566 aa7.82□□□□□ -1.16
ECHDC1-223ENST00000534442 PCDHB3Q9Y5E6 796 aa7.82□□□□□ -1.16
ECHDC1-223ENST00000534442 DIP2CQ9Y2E4 1556 aa7.81□□□□□ -1.16
ECHDC1-223ENST00000534442 FMNL1O95466 1100 aaPredicted RBP7.81□□□□□ -1.16
ECHDC1-223ENST00000534442 F12P00748 615 aaPredicted RBP7.81□□□□□ -1.16
ECHDC1-223ENST00000534442 SRPK2P78362 688 aaKnown RBP7.81□□□□□ -1.16
ECHDC1-223ENST00000534442 UCN2Q96RP3 112 aa7.81□□□□□ -1.16
ECHDC1-223ENST00000534442 WBP1LQ9NX94 342 aa7.81□□□□□ -1.16
ECHDC1-223ENST00000534442 KDM5DQ9BY66 1539 aa7.81□□□□□ -1.16
ECHDC1-223ENST00000534442 DEPDC5O75140 1603 aa7.81□□□□□ -1.16
ECHDC1-223ENST00000534442 ABCC1P33527 1531 aa7.8□□□□□ -1.16
ECHDC1-223ENST00000534442 UGGT2Q9NYU1 1516 aa7.8□□□□□ -1.16
ECHDC1-223ENST00000534442 NR1I2O75469 434 aa7.8□□□□□ -1.16
ECHDC1-223ENST00000534442 JUNDP17535 347 aa7.8□□□□□ -1.16
ECHDC1-223ENST00000534442 PPP1R12CQ9BZL4 782 aa7.8□□□□□ -1.16
ECHDC1-223ENST00000534442 FAM160A2Q8N612 972 aaPredicted RBP7.79□□□□□ -1.16
ECHDC1-223ENST00000534442 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.78□□□□□ -1.16
ECHDC1-223ENST00000534442 PALM3A6NDB9 673 aaPredicted RBP7.78□□□□□ -1.16
ECHDC1-223ENST00000534442 RFX1P22670 979 aa7.78□□□□□ -1.16
ECHDC1-223ENST00000534442 SOX11P35716 441 aa7.78□□□□□ -1.16
ECHDC1-223ENST00000534442 PTPRNQ16849 979 aa7.78□□□□□ -1.16
ECHDC1-223ENST00000534442 PBXIP1Q96AQ6 731 aa7.78□□□□□ -1.16
ECHDC1-223ENST00000534442 KRTAP3-3Q9BYR6 98 aa7.78□□□□□ -1.16
ECHDC1-223ENST00000534442 KRTAP3-2Q9BYR7 98 aa7.78□□□□□ -1.16
ECHDC1-223ENST00000534442 MAP10Q9P2G4 905 aa7.78□□□□□ -1.16
ECHDC1-223ENST00000534442 PCNTO95613 3336 aa7.78□□□□□ -1.16
ECHDC1-223ENST00000534442 TMEM94Q12767 1356 aa7.77□□□□□ -1.17
ECHDC1-223ENST00000534442 FBXO45P0C2W1 286 aa7.77□□□□□ -1.17
ECHDC1-223ENST00000534442 NR1H3Q13133 447 aa7.77□□□□□ -1.17
ECHDC1-223ENST00000534442 FKBPLQ9UIM3 349 aa7.77□□□□□ -1.17
ECHDC1-223ENST00000534442 ITSN2Q9NZM3 1697 aa7.76□□□□□ -1.17
ECHDC1-223ENST00000534442 DXOO77932 396 aaKnown RBP7.76□□□□□ -1.17
ECHDC1-223ENST00000534442 MSS51Q4VC12 460 aa7.76□□□□□ -1.17
ECHDC1-223ENST00000534442 THSD4Q6ZMP0 1018 aa7.76□□□□□ -1.17
ECHDC1-223ENST00000534442 PNMA1Q8ND90 353 aa7.76□□□□□ -1.17
ECHDC1-223ENST00000534442 TFIP11Q9UBB9 837 aaKnown RBP7.76□□□□□ -1.17
ECHDC1-223ENST00000534442 ABCA6Q8N139 1617 aa7.76□□□□□ -1.17
ECHDC1-223ENST00000534442 BIVM-ERCC5R4GMW8 1640 aa7.76□□□□□ -1.17
ECHDC1-223ENST00000534442 MAP3K1Q13233 1512 aa7.76□□□□□ -1.17
ECHDC1-223ENST00000534442 PLCH2O75038 1416 aa7.76□□□□□ -1.17
ECHDC1-223ENST00000534442 CLTCQ00610 1675 aaKnown RBP7.76□□□□□ -1.17
ECHDC1-223ENST00000534442 ACIN1Q9UKV3 1341 aaKnown RBP7.76□□□□□ -1.17
ECHDC1-223ENST00000534442 UNC13BO14795 1591 aa7.76□□□□□ -1.17
ECHDC1-223ENST00000534442 BAG6P46379 1132 aa7.75□□□□□ -1.17
ECHDC1-223ENST00000534442 SEMA3FQ13275 785 aa7.75□□□□□ -1.17
ECHDC1-223ENST00000534442 DNAJC5GQ8N7S2 189 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms