RNA–Protein interactions for RNA: ENST00000531594.1

RC3H1-206, Transcript of ring finger and CCCH-type domains 1, humanhuman

TSL 3

Gene RC3H1, Length 303 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-206ENST00000531594 COL8A1P27658 744 aa4.54□□□□□ -1.68
RC3H1-206ENST00000531594 PTGIRP43119 386 aa4.54□□□□□ -1.68
RC3H1-206ENST00000531594 BAG6P46379 1132 aa4.54□□□□□ -1.68
RC3H1-206ENST00000531594 CLK2P49760 499 aaKnown RBP4.54□□□□□ -1.68
RC3H1-206ENST00000531594 DHX9Q08211 1270 aaKnown RBP4.54□□□□□ -1.68
RC3H1-206ENST00000531594 TUSC1Q2TAM9 212 aa4.54□□□□□ -1.68
RC3H1-206ENST00000531594 ZBTB33Q86T24 672 aa4.54□□□□□ -1.68
RC3H1-206ENST00000531594 GTPBP3Q969Y2 492 aaKnown RBP4.54□□□□□ -1.68
RC3H1-206ENST00000531594 POLR3EQ9NVU0 708 aa4.54□□□□□ -1.68
RC3H1-206ENST00000531594 PHF20L1A8MW92 1017 aa4.53□□□□□ -1.68
RC3H1-206ENST00000531594 SHISA8B8ZZ34 492 aa4.53□□□□□ -1.68
RC3H1-206ENST00000531594 THBS1P07996 1170 aa4.53□□□□□ -1.68
RC3H1-206ENST00000531594 ITGB7P26010 798 aa4.53□□□□□ -1.68
RC3H1-206ENST00000531594 RIPOR1Q6ZS17 1223 aa4.53□□□□□ -1.68
RC3H1-206ENST00000531594 C1orf229Q6ZS94 237 aaPredicted RBP4.53□□□□□ -1.68
RC3H1-206ENST00000531594 TRIM22Q8IYM9 498 aa4.53□□□□□ -1.68
RC3H1-206ENST00000531594 BEND7Q8N7W2 519 aaPredicted RBP4.53□□□□□ -1.68
RC3H1-206ENST00000531594 PSMG3-AS1Q96PY0 264 aa4.53□□□□□ -1.68
RC3H1-206ENST00000531594 CYLDQ9NQC7 956 aa4.53□□□□□ -1.68
RC3H1-206ENST00000531594 ENAMQ9NRM1 1142 aa4.53□□□□□ -1.68
RC3H1-206ENST00000531594 RNF144AP50876 292 aaPredicted RBP4.51□□□□□ -1.69
RC3H1-206ENST00000531594 PODNQ7Z5L7 613 aa4.51□□□□□ -1.69
RC3H1-206ENST00000531594 GAS2L1Q99501 681 aaPredicted RBP4.51□□□□□ -1.69
RC3H1-206ENST00000531594 HMX1Q9NP08 348 aaPredicted RBP4.51□□□□□ -1.69
RC3H1-206ENST00000531594 CDV3Q9UKY7 258 aaKnown RBP4.51□□□□□ -1.69
RC3H1-206ENST00000531594 ESPNB1AK53 854 aa4.5□□□□□ -1.69
RC3H1-206ENST00000531594 OIP5O43482 229 aa4.5□□□□□ -1.69
RC3H1-206ENST00000531594 PDE4DQ08499 809 aa4.5□□□□□ -1.69
RC3H1-206ENST00000531594 POU4F2Q12837 409 aa4.5□□□□□ -1.69
RC3H1-206ENST00000531594 SUV39H2Q9H5I1 410 aa4.5□□□□□ -1.69
RC3H1-206ENST00000531594 MEN1O00255 615 aa4.49□□□□□ -1.69
RC3H1-206ENST00000531594 HOXB4P17483 251 aaPredicted RBP4.49□□□□□ -1.69
RC3H1-206ENST00000531594 MX2P20592 715 aa4.49□□□□□ -1.69
RC3H1-206ENST00000531594 NBPF20Q3BBV1 942 aa4.49□□□□□ -1.69
RC3H1-206ENST00000531594 KRTAP1-3Q8IUG1 177 aa4.49□□□□□ -1.69
RC3H1-206ENST00000531594 AK7Q96M32 723 aa4.49□□□□□ -1.69
RC3H1-206ENST00000531594 PTK2Q05397 1052 aa4.48□□□□□ -1.69
RC3H1-206ENST00000531594 PROCA1Q8NCQ7 364 aaPredicted RBP4.48□□□□□ -1.69
RC3H1-206ENST00000531594 A0A1W2PRU2 124 aa4.47□□□□□ -1.69
RC3H1-206ENST00000531594 DZIP3Q86Y13 1208 aaKnown RBP4.47□□□□□ -1.69
RC3H1-206ENST00000531594 VSIG10Q8N0Z9 540 aa4.47□□□□□ -1.69
RC3H1-206ENST00000531594 OXCT2Q9BYC2 517 aaPredicted RBP4.47□□□□□ -1.69
RC3H1-206ENST00000531594 DYRK1BQ9Y463 629 aa4.47□□□□□ -1.69
RC3H1-206ENST00000531594 ZC3H4Q9UPT8 1303 aaKnown RBP4.46□□□□□ -1.69
RC3H1-206ENST00000531594 ATP5J2-PTCD1G3V325 749 aa4.46□□□□□ -1.7
RC3H1-206ENST00000531594 GIGYF1O75420 1035 aaPredicted RBP4.46□□□□□ -1.7
RC3H1-206ENST00000531594 CHRNA4P43681 627 aa4.46□□□□□ -1.7
RC3H1-206ENST00000531594 SCTRP47872 440 aa4.46□□□□□ -1.7
RC3H1-206ENST00000531594 GRIN2CQ14957 1233 aa4.46□□□□□ -1.7
RC3H1-206ENST00000531594 NBPF10Q6P3W6 841 aaKnown RBP4.46□□□□□ -1.7
RC3H1-206ENST00000531594 FOXR1Q6PIV2 292 aa4.46□□□□□ -1.7
RC3H1-206ENST00000531594 NBPF15Q8N660 670 aa4.46□□□□□ -1.7
RC3H1-206ENST00000531594 NUCKS1Q9H1E3 243 aaKnown RBP4.46□□□□□ -1.7
RC3H1-206ENST00000531594 C1QTNF9BB2RNN3 333 aa4.45□□□□□ -1.7
RC3H1-206ENST00000531594 C2CD2LO14523 706 aa4.45□□□□□ -1.7
RC3H1-206ENST00000531594 AP1G2O75843 785 aa4.45□□□□□ -1.7
RC3H1-206ENST00000531594 UBAP2LQ14157 1087 aaKnown RBP4.45□□□□□ -1.7
RC3H1-206ENST00000531594 CD163Q86VB7 1156 aa4.45□□□□□ -1.7
RC3H1-206ENST00000531594 KLRG1Q96E93 195 aa4.45□□□□□ -1.7
RC3H1-206ENST00000531594 GMCL1Q96IK5 515 aa4.45□□□□□ -1.7
RC3H1-206ENST00000531594 TRERF1Q96PN7 1200 aa4.45□□□□□ -1.7
RC3H1-206ENST00000531594 RRAGCQ9HB90 399 aa4.45□□□□□ -1.7
RC3H1-206ENST00000531594 GPAMQ9HCL2 828 aa4.45□□□□□ -1.7
RC3H1-206ENST00000531594 GPSM3Q9Y4H4 160 aa4.45□□□□□ -1.7
RC3H1-206ENST00000531594 SLC27A3Q5K4L6 730 aa4.44□□□□□ -1.7
RC3H1-206ENST00000531594 LINC00114Q6XXX2 140 aa4.44□□□□□ -1.7
RC3H1-206ENST00000531594 GNL3Q9BVP2 549 aaKnown RBP eCLIP4.44□□□□□ -1.7
RC3H1-206ENST00000531594 GRIP2Q9C0E4 1043 aa4.44□□□□□ -1.7
RC3H1-206ENST00000531594 SLC24A3Q9HC58 644 aa4.44□□□□□ -1.7
RC3H1-206ENST00000531594 ARHGEF10LQ9HCE6 1279 aa4.44□□□□□ -1.7
RC3H1-206ENST00000531594 RAB6BQ9NRW1 208 aa4.44□□□□□ -1.7
RC3H1-206ENST00000531594 LRRC4BQ9NT99 713 aa4.44□□□□□ -1.7
RC3H1-206ENST00000531594 MKL2Q9ULH7 1088 aa4.44□□□□□ -1.7
RC3H1-206ENST00000531594 H7C1W4 665 aa4.43□□□□□ -1.7
RC3H1-206ENST00000531594 USP17L8P0C7I0 530 aa4.43□□□□□ -1.7
RC3H1-206ENST00000531594 GPC1P35052 558 aa4.43□□□□□ -1.7
RC3H1-206ENST00000531594 PHKA2P46019 1235 aa4.43□□□□□ -1.7
RC3H1-206ENST00000531594 FOXD4L6Q3SYB3 417 aaPredicted RBP4.43□□□□□ -1.7
RC3H1-206ENST00000531594 PPP2R2DQ66LE6 453 aa4.43□□□□□ -1.7
RC3H1-206ENST00000531594 FOXD4L3Q6VB84 417 aaPredicted RBP4.43□□□□□ -1.7
RC3H1-206ENST00000531594 EDARADDQ8WWZ3 215 aa4.43□□□□□ -1.7
RC3H1-206ENST00000531594 TRIM34Q9BYJ4 488 aa4.43□□□□□ -1.7
RC3H1-206ENST00000531594 TIMMDC1Q9NPL8 285 aa4.43□□□□□ -1.7
RC3H1-206ENST00000531594 SPATA31C2B4DYI2 1134 aa4.42□□□□□ -1.7
RC3H1-206ENST00000531594 WASLO00401 505 aaPredicted RBP4.42□□□□□ -1.7
RC3H1-206ENST00000531594 ERVK-9P63128 1117 aa4.42□□□□□ -1.7
RC3H1-206ENST00000531594 DOC2BQ14184 412 aa4.42□□□□□ -1.7
RC3H1-206ENST00000531594 KRTAP4-12Q9BQ66 201 aa4.42□□□□□ -1.7
RC3H1-206ENST00000531594 HCN2Q9UL51 889 aa4.42□□□□□ -1.7
RC3H1-206ENST00000531594 F11P03951 625 aa4.41□□□□□ -1.7
RC3H1-206ENST00000531594 MAP2K3P46734 347 aa4.41□□□□□ -1.7
RC3H1-206ENST00000531594 CLN3Q13286 438 aa4.41□□□□□ -1.7
RC3H1-206ENST00000531594 RSPH6AQ9H0K4 717 aa4.41□□□□□ -1.7
RC3H1-206ENST00000531594 SEMA6BQ9H3T3 888 aa4.41□□□□□ -1.7
RC3H1-206ENST00000531594 OSBPL3Q9H4L5 887 aa4.41□□□□□ -1.7
RC3H1-206ENST00000531594 RUBCNLQ9H714 662 aa4.41□□□□□ -1.7
RC3H1-206ENST00000531594 PCDHB9Q9Y5E1 797 aa4.41□□□□□ -1.7
RC3H1-206ENST00000531594 STAU1O95793 577 aaKnown RBP4.4□□□□□ -1.71
RC3H1-206ENST00000531594 FBXO45P0C2W1 286 aa4.4□□□□□ -1.71
RC3H1-206ENST00000531594 CTBSQ01459 385 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms