RNA–Protein interactions for RNA: ENST00000531594.1

RC3H1-206, Transcript of ring finger and CCCH-type domains 1, humanhuman

TSL 3

Gene RC3H1, Length 303 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-206ENST00000531594 AEBP2Q6ZN18 517 aaPredicted RBP14.77□□□□□ -0.05
RC3H1-206ENST00000531594 CHIC1Q5VXU3 224 aa13.72□□□□□ -0.21
RC3H1-206ENST00000531594 SENP3Q9H4L4 574 aaPredicted RBP12.47□□□□□ -0.41
RC3H1-206ENST00000531594 PHF23Q9BUL5 403 aaPredicted RBP12.34□□□□□ -0.43
RC3H1-206ENST00000531594 FOXD1Q16676 465 aa11.76□□□□□ -0.53
RC3H1-206ENST00000531594 POTEDQ86YR6 584 aa11.17□□□□□ -0.62
RC3H1-206ENST00000531594 MSH5O43196 834 aa10.95□□□□□ -0.66
RC3H1-206ENST00000531594 PIAS4Q8N2W9 510 aaPredicted RBP10.9□□□□□ -0.66
RC3H1-206ENST00000531594 PPP6R1Q9UPN7 881 aa10.89□□□□□ -0.67
RC3H1-206ENST00000531594 ADRA2BP18089 450 aa10.82□□□□□ -0.68
RC3H1-206ENST00000531594 PLPPR3Q6T4P5 718 aa10.8□□□□□ -0.68
RC3H1-206ENST00000531594 MAPK8IP2Q13387 824 aaPredicted RBP10.03□□□□□ -0.8
RC3H1-206ENST00000531594 DMRT2Q9Y5R5 561 aa9.89□□□□□ -0.83
RC3H1-206ENST00000531594 SCAF1Q9H7N4 1312 aaKnown RBP9.69□□□□□ -0.86
RC3H1-206ENST00000531594 CACNB1Q02641 598 aaPredicted RBP9.58□□□□□ -0.88
RC3H1-206ENST00000531594 DCAF8L1A6NGE4 600 aa9.52□□□□□ -0.89
RC3H1-206ENST00000531594 PPP4R3CPQ6ZMV5 832 aa9.5□□□□□ -0.89
RC3H1-206ENST00000531594 HOXD11P31277 338 aaPredicted RBP9.44□□□□□ -0.9
RC3H1-206ENST00000531594 RNF39Q9H2S5 420 aa9.4□□□□□ -0.9
RC3H1-206ENST00000531594 CNKSR2Q8WXI2 1034 aa9.31□□□□□ -0.92
RC3H1-206ENST00000531594 RNF216Q9NWF9 866 aaPredicted RBP9.28□□□□□ -0.92
RC3H1-206ENST00000531594 C1QBPQ07021 282 aaKnown RBP9.17□□□□□ -0.94
RC3H1-206ENST00000531594 DNAJC5BQ9UF47 199 aa9.04□□□□□ -0.96
RC3H1-206ENST00000531594 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.98□□□□□ -0.97
RC3H1-206ENST00000531594 NPM3O75607 178 aaKnown RBP8.97□□□□□ -0.97
RC3H1-206ENST00000531594 NCBP3Q53F19 620 aaKnown RBP8.95□□□□□ -0.98
RC3H1-206ENST00000531594 U3KPZ7 1027 aaPredicted RBP8.84□□□□□ -0.99
RC3H1-206ENST00000531594 SPINK5Q9NQ38 1064 aaPredicted RBP8.82□□□□□ -1
RC3H1-206ENST00000531594 DSG3P32926 999 aa8.75□□□□□ -1.01
RC3H1-206ENST00000531594 CAPN15O75808 1086 aa8.73□□□□□ -1.01
RC3H1-206ENST00000531594 POTEHQ6S545 545 aa8.68□□□□□ -1.02
RC3H1-206ENST00000531594 SLC4A2P04920 1241 aa8.66□□□□□ -1.02
RC3H1-206ENST00000531594 KCNA4P22459 653 aa8.65□□□□□ -1.02
RC3H1-206ENST00000531594 ABCB7O75027 752 aa8.58□□□□□ -1.04
RC3H1-206ENST00000531594 TRHP20396 242 aaPredicted RBP8.56□□□□□ -1.04
RC3H1-206ENST00000531594 ZNF219Q9P2Y4 722 aaPredicted RBP8.44□□□□□ -1.06
RC3H1-206ENST00000531594 APLP2Q06481 763 aa8.35□□□□□ -1.07
RC3H1-206ENST00000531594 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.33□□□□□ -1.08
RC3H1-206ENST00000531594 HNRNPUL2Q1KMD3 747 aaKnown RBP8.33□□□□□ -1.08
RC3H1-206ENST00000531594 SAMD1Q6SPF0 538 aaPredicted RBP8.32□□□□□ -1.08
RC3H1-206ENST00000531594 POLA2Q14181 598 aa8.27□□□□□ -1.09
RC3H1-206ENST00000531594 MYCNP04198 464 aaPredicted RBP8.23□□□□□ -1.09
RC3H1-206ENST00000531594 CHRDL2Q6WN34 429 aa8.23□□□□□ -1.09
RC3H1-206ENST00000531594 RBM42Q9BTD8 480 aaKnown RBP8.23□□□□□ -1.09
RC3H1-206ENST00000531594 ATF5Q9Y2D1 282 aaPredicted RBP8.21□□□□□ -1.1
RC3H1-206ENST00000531594 OSCARQ8IYS5 282 aa8.06□□□□□ -1.12
RC3H1-206ENST00000531594 SLC4A1APQ9BWU0 796 aaKnown RBP8.05□□□□□ -1.12
RC3H1-206ENST00000531594 FOXD4L1Q9NU39 408 aa8.05□□□□□ -1.12
RC3H1-206ENST00000531594 AKT1S1Q96B36 256 aa8.04□□□□□ -1.12
RC3H1-206ENST00000531594 REM2Q8IYK8 340 aaPredicted RBP8.03□□□□□ -1.12
RC3H1-206ENST00000531594 PIP4P2Q8N4L2 257 aa8.02□□□□□ -1.13
RC3H1-206ENST00000531594 SP7Q8TDD2 431 aaPredicted RBP8.02□□□□□ -1.13
RC3H1-206ENST00000531594 ZBTB22O15209 634 aa8.01□□□□□ -1.13
RC3H1-206ENST00000531594 PITPNM1O00562 1244 aa7.97□□□□□ -1.13
RC3H1-206ENST00000531594 ZBTB12Q9Y330 459 aaPredicted RBP7.95□□□□□ -1.14
RC3H1-206ENST00000531594 FXR2P51116 673 aaKnown RBP eCLIP7.9□□□□□ -1.14
RC3H1-206ENST00000531594 EVX2Q03828 476 aa7.9□□□□□ -1.14
RC3H1-206ENST00000531594 HAX1O00165 279 aa7.89□□□□□ -1.15
RC3H1-206ENST00000531594 MKRN4PQ13434 485 aaPredicted RBP7.79□□□□□ -1.16
RC3H1-206ENST00000531594 SPDYE2BA6NHP3 402 aa7.75□□□□□ -1.17
RC3H1-206ENST00000531594 SPDYE6P0CI01 402 aa7.75□□□□□ -1.17
RC3H1-206ENST00000531594 ATXN8OSP0DMR3 200 aa7.75□□□□□ -1.17
RC3H1-206ENST00000531594 SPDYE2Q495Y8 402 aa7.75□□□□□ -1.17
RC3H1-206ENST00000531594 PRKAR2AP13861 404 aaKnown RBP7.74□□□□□ -1.17
RC3H1-206ENST00000531594 CLEC11AQ9Y240 323 aa7.73□□□□□ -1.17
RC3H1-206ENST00000531594 FBLN2P98095 1184 aa7.71□□□□□ -1.18
RC3H1-206ENST00000531594 CHADLQ6NUI6 762 aa7.68□□□□□ -1.18
RC3H1-206ENST00000531594 SSUH2Q9Y2M2 353 aa7.68□□□□□ -1.18
RC3H1-206ENST00000531594 C19orf67A6NJJ6 358 aa7.66□□□□□ -1.18
RC3H1-206ENST00000531594 SPDYE1Q8NFV5 336 aaPredicted RBP7.66□□□□□ -1.18
RC3H1-206ENST00000531594 ZNF692Q9BU19 519 aaPredicted RBP7.65□□□□□ -1.18
RC3H1-206ENST00000531594 GABBR2O75899 941 aa7.62□□□□□ -1.19
RC3H1-206ENST00000531594 PABPN1Q86U42 306 aaKnown RBP eCLIP7.57□□□□□ -1.2
RC3H1-206ENST00000531594 POTEIP0CG38 1075 aa7.53□□□□□ -1.2
RC3H1-206ENST00000531594 PRR29P0C7W0 189 aa7.52□□□□□ -1.21
RC3H1-206ENST00000531594 LHX8Q68G74 356 aa7.52□□□□□ -1.21
RC3H1-206ENST00000531594 CD44P16070 742 aaKnown RBP7.47□□□□□ -1.21
RC3H1-206ENST00000531594 FARP1Q9Y4F1 1045 aaPredicted RBP7.46□□□□□ -1.22
RC3H1-206ENST00000531594 CSRNP3Q8WYN3 585 aa7.39□□□□□ -1.23
RC3H1-206ENST00000531594 CREBZFQ9NS37 354 aa7.36□□□□□ -1.23
RC3H1-206ENST00000531594 GALR2O43603 387 aaPredicted RBP7.33□□□□□ -1.24
RC3H1-206ENST00000531594 ZNF579Q8NAF0 562 aaKnown RBP7.33□□□□□ -1.24
RC3H1-206ENST00000531594 ZRANB1Q9UGI0 708 aa7.33□□□□□ -1.24
RC3H1-206ENST00000531594 DCBLD2Q96PD2 775 aa7.3□□□□□ -1.24
RC3H1-206ENST00000531594 POTEB2H3BUK9 544 aa7.29□□□□□ -1.24
RC3H1-206ENST00000531594 PHF12Q96QT6 1004 aa7.28□□□□□ -1.24
RC3H1-206ENST00000531594 OTUD5Q96G74 571 aa7.25□□□□□ -1.25
RC3H1-206ENST00000531594 PLSCR2Q9NRY7 297 aa7.25□□□□□ -1.25
RC3H1-206ENST00000531594 SPDYE4A6NLX3 237 aa7.23□□□□□ -1.25
RC3H1-206ENST00000531594 MNX1P50219 401 aaPredicted RBP7.23□□□□□ -1.25
RC3H1-206ENST00000531594 CLCN6P51797 869 aa7.23□□□□□ -1.25
RC3H1-206ENST00000531594 PELP1Q8IZL8 1130 aaKnown RBP7.23□□□□□ -1.25
RC3H1-206ENST00000531594 EHMT2Q96KQ7 1210 aa7.19□□□□□ -1.26
RC3H1-206ENST00000531594 STAG3Q9UJ98 1225 aa7.19□□□□□ -1.26
RC3H1-206ENST00000531594 POTEJP0CG39 1038 aa7.16□□□□□ -1.26
RC3H1-206ENST00000531594 MS4A3Q96HJ5 214 aa7.15□□□□□ -1.26
RC3H1-206ENST00000531594 PAK3O75914 559 aaPredicted RBP7.13□□□□□ -1.27
RC3H1-206ENST00000531594 POTEMA6NI47 508 aa7.11□□□□□ -1.27
RC3H1-206ENST00000531594 ATMINO43313 823 aaPredicted RBP7.1□□□□□ -1.27
RC3H1-206ENST00000531594 METRNQ9UJH8 293 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms