RNA–Protein interactions for RNA: ENST00000527497.1

NXF1-205, Transcript of nuclear RNA export factor 1, humanhuman

TSL 2

Gene NXF1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-205ENST00000527497 HINFPQ9BQA5 517 aa8.69□□□□□ -1.02
NXF1-205ENST00000527497 SEPT9Q9UHD8 586 aaPredicted RBP8.69□□□□□ -1.02
NXF1-205ENST00000527497 SALL2Q9Y467 1007 aaPredicted RBP8.69□□□□□ -1.02
NXF1-205ENST00000527497 TREHO43280 583 aa8.68□□□□□ -1.02
NXF1-205ENST00000527497 NDUFB5O43674 189 aa8.68□□□□□ -1.02
NXF1-205ENST00000527497 ACTN4O43707 911 aaKnown RBP8.68□□□□□ -1.02
NXF1-205ENST00000527497 PSME1Q06323 249 aa8.68□□□□□ -1.02
NXF1-205ENST00000527497 PUS10Q3MIT2 529 aaKnown RBP8.68□□□□□ -1.02
NXF1-205ENST00000527497 RNF19BQ6ZMZ0 732 aa8.68□□□□□ -1.02
NXF1-205ENST00000527497 ADAM32Q8TC27 787 aa8.68□□□□□ -1.02
NXF1-205ENST00000527497 CCDC85AQ96PX6 553 aaPredicted RBP8.68□□□□□ -1.02
NXF1-205ENST00000527497 TLDC2A0PJX2 215 aa8.67□□□□□ -1.02
NXF1-205ENST00000527497 PRPF40AO75400 957 aaKnown RBP8.67□□□□□ -1.02
NXF1-205ENST00000527497 FANCCQ00597 558 aa8.67□□□□□ -1.02
NXF1-205ENST00000527497 FKBP5Q13451 457 aaPredicted RBP8.67□□□□□ -1.02
NXF1-205ENST00000527497 GNL2Q13823 731 aaKnown RBP8.67□□□□□ -1.02
NXF1-205ENST00000527497 SAMD7Q7Z3H4 446 aa8.67□□□□□ -1.02
NXF1-205ENST00000527497 CITED4Q96RK1 184 aa8.67□□□□□ -1.02
NXF1-205ENST00000527497 CAPN10Q9HC96 672 aa8.67□□□□□ -1.02
NXF1-205ENST00000527497 PARP2Q9UGN5 583 aa8.67□□□□□ -1.02
NXF1-205ENST00000527497 M0R2N6 131 aa8.66□□□□□ -1.02
NXF1-205ENST00000527497 LDHBP07195 334 aaKnown RBP8.66□□□□□ -1.02
NXF1-205ENST00000527497 BLOC1S3Q6QNY0 202 aa8.66□□□□□ -1.02
NXF1-205ENST00000527497 ZNF662Q6ZS27 426 aa8.66□□□□□ -1.02
NXF1-205ENST00000527497 TMC4Q7Z404 712 aa8.66□□□□□ -1.02
NXF1-205ENST00000527497 DHX38Q92620 1227 aaKnown RBP8.66□□□□□ -1.02
NXF1-205ENST00000527497 ARHGAP9Q9BRR9 750 aa8.66□□□□□ -1.02
NXF1-205ENST00000527497 PCDHGA11Q9Y5H2 935 aa8.66□□□□□ -1.02
NXF1-205ENST00000527497 SORBS3O60504 671 aa8.65□□□□□ -1.02
NXF1-205ENST00000527497 RNF40O75150 1001 aa8.65□□□□□ -1.02
NXF1-205ENST00000527497 BRICD5Q6PL45 260 aa8.65□□□□□ -1.02
NXF1-205ENST00000527497 GTF2F1P35269 517 aaKnown RBP eCLIP8.64□□□□□ -1.03
NXF1-205ENST00000527497 ZNF76P36508 570 aa8.64□□□□□ -1.03
NXF1-205ENST00000527497 CCDC144BQ3MJ40 725 aa8.64□□□□□ -1.03
NXF1-205ENST00000527497 RNF20Q5VTR2 975 aa8.64□□□□□ -1.03
NXF1-205ENST00000527497 CAPN12Q6ZSI9 719 aa8.64□□□□□ -1.03
NXF1-205ENST00000527497 ZBTB33Q86T24 672 aa8.64□□□□□ -1.03
NXF1-205ENST00000527497 DZIP3Q86Y13 1208 aaKnown RBP8.64□□□□□ -1.03
NXF1-205ENST00000527497 GMLQ99445 158 aa8.64□□□□□ -1.03
NXF1-205ENST00000527497 PRR14Q9BWN1 585 aa8.64□□□□□ -1.03
NXF1-205ENST00000527497 CCNYL3P0C7X3 344 aa8.63□□□□□ -1.03
NXF1-205ENST00000527497 DAB2P98082 770 aa8.63□□□□□ -1.03
NXF1-205ENST00000527497 PLCB3Q01970 1234 aa8.63□□□□□ -1.03
NXF1-205ENST00000527497 DSC3Q14574 896 aa8.63□□□□□ -1.03
NXF1-205ENST00000527497 DMRTB1Q96MA1 342 aa8.63□□□□□ -1.03
NXF1-205ENST00000527497 DUSP9Q99956 384 aaKnown RBP8.63□□□□□ -1.03
NXF1-205ENST00000527497 SLC4A5Q9BY07 1137 aa8.63□□□□□ -1.03
NXF1-205ENST00000527497 EVA1BQ9NVM1 165 aa8.63□□□□□ -1.03
NXF1-205ENST00000527497 VTI1BQ9UEU0 232 aa8.63□□□□□ -1.03
NXF1-205ENST00000527497 FOXO3O43524 673 aa8.62□□□□□ -1.03
NXF1-205ENST00000527497 LGR5O75473 907 aa8.62□□□□□ -1.03
NXF1-205ENST00000527497 GABBR2O75899 941 aa8.62□□□□□ -1.03
NXF1-205ENST00000527497 USP4Q13107 963 aa8.62□□□□□ -1.03
NXF1-205ENST00000527497 PSMD2Q13200 908 aa8.62□□□□□ -1.03
NXF1-205ENST00000527497 SOGA3Q5TF21 947 aa8.62□□□□□ -1.03
NXF1-205ENST00000527497 LAPTM4BQ86VI4 370 aa8.62□□□□□ -1.03
NXF1-205ENST00000527497 FAM161BQ96MY7 647 aa8.62□□□□□ -1.03
NXF1-205ENST00000527497 PRKD2Q9BZL6 878 aa8.62□□□□□ -1.03
NXF1-205ENST00000527497 MAPK8P45983 427 aa8.61□□□□□ -1.03
NXF1-205ENST00000527497 ATP2B2Q01814 1243 aa8.61□□□□□ -1.03
NXF1-205ENST00000527497 NAA30Q147X3 362 aaPredicted RBP8.61□□□□□ -1.03
NXF1-205ENST00000527497 SDE2Q6IQ49 451 aa8.61□□□□□ -1.03
NXF1-205ENST00000527497 TSEN2Q8NCE0 465 aaKnown RBP8.61□□□□□ -1.03
NXF1-205ENST00000527497 TMC1Q8TDI8 760 aa8.61□□□□□ -1.03
NXF1-205ENST00000527497 IQSEC3Q9UPP2 1182 aaPredicted RBP8.61□□□□□ -1.03
NXF1-205ENST00000527497 SBNO2Q9Y2G9 1366 aa8.61□□□□□ -1.03
NXF1-205ENST00000527497 ARID4BQ4LE39 1312 aaPredicted RBP8.6□□□□□ -1.03
NXF1-205ENST00000527497 IGFBP4P22692 258 aa8.6□□□□□ -1.03
NXF1-205ENST00000527497 MPSTP25325 297 aa8.6□□□□□ -1.03
NXF1-205ENST00000527497 EHHADHQ08426 723 aa8.6□□□□□ -1.03
NXF1-205ENST00000527497 PURBQ96QR8 312 aaKnown RBP8.6□□□□□ -1.03
NXF1-205ENST00000527497 ACBD3Q9H3P7 528 aa8.6□□□□□ -1.03
NXF1-205ENST00000527497 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.6□□□□□ -1.03
NXF1-205ENST00000527497 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.6□□□□□ -1.03
NXF1-205ENST00000527497 TBX22Q9Y458 520 aa8.6□□□□□ -1.03
NXF1-205ENST00000527497 GIGYF1O75420 1035 aaPredicted RBP8.59□□□□□ -1.03
NXF1-205ENST00000527497 RBL2Q08999 1139 aa8.59□□□□□ -1.03
NXF1-205ENST00000527497 EGFLAMQ63HQ2 1017 aa8.59□□□□□ -1.03
NXF1-205ENST00000527497 ALKBH2Q6NS38 261 aa8.59□□□□□ -1.03
NXF1-205ENST00000527497 SH3BP5LQ7L8J4 393 aa8.59□□□□□ -1.03
NXF1-205ENST00000527497 NUDT12Q9BQG2 462 aa8.59□□□□□ -1.03
NXF1-205ENST00000527497 DNAJA1P31689 397 aaKnown RBP8.58□□□□□ -1.04
NXF1-205ENST00000527497 PDE3BQ13370 1112 aa8.58□□□□□ -1.04
NXF1-205ENST00000527497 NOL8Q76FK4 1167 aaKnown RBP8.58□□□□□ -1.04
NXF1-205ENST00000527497 THAP11Q96EK4 314 aa8.58□□□□□ -1.04
NXF1-205ENST00000527497 MARCH6O60337 910 aa8.57□□□□□ -1.04
NXF1-205ENST00000527497 ARID5AQ03989 594 aa8.57□□□□□ -1.04
NXF1-205ENST00000527497 PMFBP1Q8TBY8 1022 aa8.57□□□□□ -1.04
NXF1-205ENST00000527497 ALKBH8Q96BT7 664 aaKnown RBP8.57□□□□□ -1.04
NXF1-205ENST00000527497 DXOO77932 396 aaKnown RBP8.56□□□□□ -1.04
NXF1-205ENST00000527497 NBPF20Q3BBV1 942 aa8.56□□□□□ -1.04
NXF1-205ENST00000527497 MSS51Q4VC12 460 aa8.56□□□□□ -1.04
NXF1-205ENST00000527497 FAM129BQ96TA1 746 aa8.56□□□□□ -1.04
NXF1-205ENST00000527497 ZSWIM4Q9H7M6 989 aa8.56□□□□□ -1.04
NXF1-205ENST00000527497 NR1I2O75469 434 aa8.55□□□□□ -1.04
NXF1-205ENST00000527497 IGHA2P01877 340 aa8.55□□□□□ -1.04
NXF1-205ENST00000527497 TNNI2P48788 182 aa8.55□□□□□ -1.04
NXF1-205ENST00000527497 ALG1LQ6GMV1 187 aa8.55□□□□□ -1.04
NXF1-205ENST00000527497 SCUBE3Q8IX30 993 aa8.55□□□□□ -1.04
NXF1-205ENST00000527497 MICAL1Q8TDZ2 1067 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms