RNA–Protein interactions for RNA: ENST00000525078.1

USP47-204, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-204ENST00000525078 RAD51AP2Q09MP3 1159 aa7.75□□□□□ -1.17
USP47-204ENST00000525078 MTMR3Q13615 1198 aa7.75□□□□□ -1.17
USP47-204ENST00000525078 GNL2Q13823 731 aaKnown RBP7.75□□□□□ -1.17
USP47-204ENST00000525078 CERS3Q8IU89 383 aa7.75□□□□□ -1.17
USP47-204ENST00000525078 HINFPQ9BQA5 517 aa7.75□□□□□ -1.17
USP47-204ENST00000525078 BCL2L12Q9HB09 334 aa7.75□□□□□ -1.17
USP47-204ENST00000525078 SEPT3Q9UH03 358 aa7.75□□□□□ -1.17
USP47-204ENST00000525078 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.75□□□□□ -1.17
USP47-204ENST00000525078 CCDC144BQ3MJ40 725 aa7.74□□□□□ -1.17
USP47-204ENST00000525078 IFFO2Q5TF58 517 aa7.74□□□□□ -1.17
USP47-204ENST00000525078 KCNH8Q96L42 1107 aa7.74□□□□□ -1.17
USP47-204ENST00000525078 CFHP08603 1231 aa7.73□□□□□ -1.17
USP47-204ENST00000525078 FGD1P98174 961 aa7.73□□□□□ -1.17
USP47-204ENST00000525078 PSME1Q06323 249 aa7.73□□□□□ -1.17
USP47-204ENST00000525078 ECM1Q16610 540 aa7.73□□□□□ -1.17
USP47-204ENST00000525078 FAM9AQ8IZU1 332 aaPredicted RBP7.73□□□□□ -1.17
USP47-204ENST00000525078 SIX5Q8N196 739 aa7.73□□□□□ -1.17
USP47-204ENST00000525078 PHTF2Q8N3S3 785 aa7.73□□□□□ -1.17
USP47-204ENST00000525078 SLC43A3Q8NBI5 491 aa7.73□□□□□ -1.17
USP47-204ENST00000525078 PMFBP1Q8TBY8 1022 aa7.73□□□□□ -1.17
USP47-204ENST00000525078 TMC1Q8TDI8 760 aa7.73□□□□□ -1.17
USP47-204ENST00000525078 RNF34Q969K3 372 aa7.73□□□□□ -1.17
USP47-204ENST00000525078 TINF2Q9BSI4 451 aa7.73□□□□□ -1.17
USP47-204ENST00000525078 TGIF2Q9GZN2 237 aa7.73□□□□□ -1.17
USP47-204ENST00000525078 NLRP2Q9NX02 1062 aa7.73□□□□□ -1.17
USP47-204ENST00000525078 SFI1A8K8P3 1242 aa7.72□□□□□ -1.17
USP47-204ENST00000525078 LGR5O75473 907 aa7.72□□□□□ -1.17
USP47-204ENST00000525078 PTK2Q05397 1052 aa7.72□□□□□ -1.17
USP47-204ENST00000525078 CCDC102BQ68D86 513 aa7.72□□□□□ -1.17
USP47-204ENST00000525078 MICAL1Q8TDZ2 1067 aa7.72□□□□□ -1.17
USP47-204ENST00000525078 FAM161BQ96MY7 647 aa7.72□□□□□ -1.17
USP47-204ENST00000525078 KIAA1024Q9UPX6 916 aa7.72□□□□□ -1.17
USP47-204ENST00000525078 SBNO2Q9Y2G9 1366 aa7.71□□□□□ -1.17
USP47-204ENST00000525078 RGS20O76081 388 aa7.71□□□□□ -1.18
USP47-204ENST00000525078 GTF2IP78347 998 aa7.71□□□□□ -1.18
USP47-204ENST00000525078 PROX2Q3B8N5 592 aa7.71□□□□□ -1.18
USP47-204ENST00000525078 Q3C1V9 767 aa7.71□□□□□ -1.18
USP47-204ENST00000525078 OXLD1Q5BKU9 147 aa7.71□□□□□ -1.18
USP47-204ENST00000525078 SDE2Q6IQ49 451 aa7.71□□□□□ -1.18
USP47-204ENST00000525078 TRAF7Q6Q0C0 670 aa7.71□□□□□ -1.18
USP47-204ENST00000525078 THSD4Q6ZMP0 1018 aa7.71□□□□□ -1.18
USP47-204ENST00000525078 TMC7Q7Z402 723 aa7.71□□□□□ -1.18
USP47-204ENST00000525078 METTL16Q86W50 562 aaKnown RBP7.71□□□□□ -1.18
USP47-204ENST00000525078 TPCN2Q8NHX9 752 aa7.71□□□□□ -1.18
USP47-204ENST00000525078 VTI1BQ9UEU0 232 aa7.71□□□□□ -1.18
USP47-204ENST00000525078 DOLKQ9UPQ8 538 aa7.71□□□□□ -1.18
USP47-204ENST00000525078 ZBTB7BO15156 539 aaPredicted RBP7.7□□□□□ -1.18
USP47-204ENST00000525078 PTCD1O75127 700 aaKnown RBP7.7□□□□□ -1.18
USP47-204ENST00000525078 LDHBP07195 334 aaKnown RBP7.7□□□□□ -1.18
USP47-204ENST00000525078 DNAJA1P31689 397 aaKnown RBP7.7□□□□□ -1.18
USP47-204ENST00000525078 CTHP32929 405 aa7.7□□□□□ -1.18
USP47-204ENST00000525078 MAPK8P45983 427 aa7.7□□□□□ -1.18
USP47-204ENST00000525078 LDLRAD1Q5T700 205 aa7.7□□□□□ -1.18
USP47-204ENST00000525078 ZBED2Q9BTP6 218 aa7.7□□□□□ -1.18
USP47-204ENST00000525078 ZSWIM4Q9H7M6 989 aa7.7□□□□□ -1.18
USP47-204ENST00000525078 PARP2Q9UGN5 583 aa7.7□□□□□ -1.18
USP47-204ENST00000525078 NDUFB5O43674 189 aa7.69□□□□□ -1.18
USP47-204ENST00000525078 SORBS3O60504 671 aa7.69□□□□□ -1.18
USP47-204ENST00000525078 RAB11FIP3O75154 756 aa7.69□□□□□ -1.18
USP47-204ENST00000525078 DKK1O94907 266 aa7.69□□□□□ -1.18
USP47-204ENST00000525078 ZNF76P36508 570 aa7.69□□□□□ -1.18
USP47-204ENST00000525078 TSGA10IPQ3SY00 556 aa7.69□□□□□ -1.18
USP47-204ENST00000525078 ARMC5Q96C12 935 aa7.69□□□□□ -1.18
USP47-204ENST00000525078 RBCK1Q9BYM8 510 aa7.69□□□□□ -1.18
USP47-204ENST00000525078 METTL5Q9NRN9 209 aaKnown RBP7.69□□□□□ -1.18
USP47-204ENST00000525078 KIAA1468Q9P260 1216 aa7.69□□□□□ -1.18
USP47-204ENST00000525078 MAP10Q9P2G4 905 aa7.69□□□□□ -1.18
USP47-204ENST00000525078 GPSM3Q9Y4H4 160 aa7.69□□□□□ -1.18
USP47-204ENST00000525078 FAM13AO94988 1023 aa7.68□□□□□ -1.18
USP47-204ENST00000525078 IGBP1P78318 339 aa7.68□□□□□ -1.18
USP47-204ENST00000525078 FANCCQ00597 558 aa7.68□□□□□ -1.18
USP47-204ENST00000525078 PSMD2Q13200 908 aa7.68□□□□□ -1.18
USP47-204ENST00000525078 NAA30Q147X3 362 aaPredicted RBP7.68□□□□□ -1.18
USP47-204ENST00000525078 DUSP9Q99956 384 aaKnown RBP7.68□□□□□ -1.18
USP47-204ENST00000525078 ACBD3Q9H3P7 528 aa7.68□□□□□ -1.18
USP47-204ENST00000525078 CHIC2Q9UKJ5 165 aa7.68□□□□□ -1.18
USP47-204ENST00000525078 hCG_2014768A0A024R1R8 64 aa7.67□□□□□ -1.18
USP47-204ENST00000525078 RNF40O75150 1001 aa7.67□□□□□ -1.18
USP47-204ENST00000525078 PRPF40AO75400 957 aaKnown RBP7.67□□□□□ -1.18
USP47-204ENST00000525078 IBSPP21815 317 aaPredicted RBP7.67□□□□□ -1.18
USP47-204ENST00000525078 PLCB3Q01970 1234 aa7.67□□□□□ -1.18
USP47-204ENST00000525078 WNT2BQ93097 391 aa7.67□□□□□ -1.18
USP47-204ENST00000525078 A0A0G2JS52 829 aa7.66□□□□□ -1.18
USP47-204ENST00000525078 TREHO43280 583 aa7.66□□□□□ -1.18
USP47-204ENST00000525078 CLSTN1O94985 981 aa7.66□□□□□ -1.18
USP47-204ENST00000525078 F12P00748 615 aaPredicted RBP7.66□□□□□ -1.18
USP47-204ENST00000525078 TNNI2P48788 182 aa7.66□□□□□ -1.18
USP47-204ENST00000525078 ATP2B2Q01814 1243 aa7.66□□□□□ -1.18
USP47-204ENST00000525078 FMR1Q06787 632 aaKnown RBP eCLIP7.66□□□□□ -1.18
USP47-204ENST00000525078 AAMPQ13685 434 aa7.66□□□□□ -1.18
USP47-204ENST00000525078 KMT5BQ4FZB7 885 aa7.66□□□□□ -1.18
USP47-204ENST00000525078 SOGA3Q5TF21 947 aa7.66□□□□□ -1.18
USP47-204ENST00000525078 EGFLAMQ63HQ2 1017 aa7.66□□□□□ -1.18
USP47-204ENST00000525078 PDXDC2PQ6P474 469 aa7.66□□□□□ -1.18
USP47-204ENST00000525078 CAPN12Q6ZSI9 719 aa7.66□□□□□ -1.18
USP47-204ENST00000525078 TMC4Q7Z404 712 aa7.66□□□□□ -1.18
USP47-204ENST00000525078 HELQQ8TDG4 1101 aa7.66□□□□□ -1.18
USP47-204ENST00000525078 IRX2Q9BZI1 471 aaPredicted RBP7.66□□□□□ -1.18
USP47-204ENST00000525078 PIF1Q9H611 641 aa7.66□□□□□ -1.18
USP47-204ENST00000525078 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 201.5 ms