RNA–Protein interactions for RNA: ENST00000523514.1

FAM49B-227, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 4

Gene FAM49B, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-227ENST00000523514 RTL1A6NKG5 1358 aa10.64□□□□□ -0.71
FAM49B-227ENST00000523514 THSD7AQ9UPZ6 1657 aa10.63□□□□□ -0.71
FAM49B-227ENST00000523514 SPATA31A1Q5TZJ5 1347 aa10.63□□□□□ -0.71
FAM49B-227ENST00000523514 WDR17Q8IZU2 1322 aa10.63□□□□□ -0.71
FAM49B-227ENST00000523514 C11orf95C9JLR9 678 aaPredicted RBP10.63□□□□□ -0.71
FAM49B-227ENST00000523514 ONECUT3O60422 494 aaPredicted RBP10.63□□□□□ -0.71
FAM49B-227ENST00000523514 NKX1-1Q15270 411 aaPredicted RBP10.63□□□□□ -0.71
FAM49B-227ENST00000523514 GGNBP2Q9H3C7 697 aa10.63□□□□□ -0.71
FAM49B-227ENST00000523514 THRAP3Q9Y2W1 955 aaKnown RBP10.63□□□□□ -0.71
FAM49B-227ENST00000523514 CCDC7Q96M83 1385 aa10.63□□□□□ -0.71
FAM49B-227ENST00000523514 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.62□□□□□ -0.71
FAM49B-227ENST00000523514 GABBR2O75899 941 aa10.62□□□□□ -0.71
FAM49B-227ENST00000523514 ZFP91Q96JP5 570 aaPredicted RBP10.62□□□□□ -0.71
FAM49B-227ENST00000523514 PANK3Q9H999 370 aa10.62□□□□□ -0.71
FAM49B-227ENST00000523514 BRWD3Q6RI45 1802 aa10.62□□□□□ -0.71
FAM49B-227ENST00000523514 WNK3Q9BYP7 1800 aa10.62□□□□□ -0.71
FAM49B-227ENST00000523514 KIF24Q5T7B8 1368 aa10.62□□□□□ -0.71
FAM49B-227ENST00000523514 A0A0G2JS52 829 aa10.61□□□□□ -0.71
FAM49B-227ENST00000523514 STK25O00506 426 aa10.61□□□□□ -0.71
FAM49B-227ENST00000523514 MYT1Q01538 1121 aa10.61□□□□□ -0.71
FAM49B-227ENST00000523514 FAM98CQ17RN3 349 aaKnown RBP10.61□□□□□ -0.71
FAM49B-227ENST00000523514 LARP1Q6PKG0 1096 aaKnown RBP10.61□□□□□ -0.71
FAM49B-227ENST00000523514 BARGINQ6ZT62 677 aa10.61□□□□□ -0.71
FAM49B-227ENST00000523514 SEPT12Q8IYM1 358 aa10.61□□□□□ -0.71
FAM49B-227ENST00000523514 SPRYD3Q8NCJ5 442 aa10.61□□□□□ -0.71
FAM49B-227ENST00000523514 PARP4Q9UKK3 1724 aaKnown RBP10.61□□□□□ -0.71
FAM49B-227ENST00000523514 ERBB3P21860 1342 aa10.6□□□□□ -0.71
FAM49B-227ENST00000523514 WASHC2AQ641Q2 1341 aa10.6□□□□□ -0.71
FAM49B-227ENST00000523514 CSB-PGBD3P0DP91 1061 aa10.6□□□□□ -0.71
FAM49B-227ENST00000523514 TOM1L2Q6ZVM7 507 aa10.6□□□□□ -0.71
FAM49B-227ENST00000523514 TCP11L2Q8N4U5 519 aa10.6□□□□□ -0.71
FAM49B-227ENST00000523514 ZNF579Q8NAF0 562 aaKnown RBP10.6□□□□□ -0.71
FAM49B-227ENST00000523514 IP6K1Q92551 441 aa10.6□□□□□ -0.71
FAM49B-227ENST00000523514 AXIN2Q9Y2T1 843 aa10.6□□□□□ -0.71
FAM49B-227ENST00000523514 KNSTRNQ9Y448 316 aa10.6□□□□□ -0.71
FAM49B-227ENST00000523514 MAP3K19Q56UN5 1328 aa10.59□□□□□ -0.71
FAM49B-227ENST00000523514 SMG6Q86US8 1419 aaKnown RBP10.59□□□□□ -0.71
FAM49B-227ENST00000523514 AMPHP49418 695 aa10.59□□□□□ -0.71
FAM49B-227ENST00000523514 TPRNQ4KMQ1 711 aa10.59□□□□□ -0.71
FAM49B-227ENST00000523514 CDCA7Q9BWT1 371 aaPredicted RBP10.59□□□□□ -0.71
FAM49B-227ENST00000523514 CARD10Q9BWT7 1032 aa10.59□□□□□ -0.71
FAM49B-227ENST00000523514 FLT4P35916 1363 aa10.59□□□□□ -0.71
FAM49B-227ENST00000523514 HOXC9P31274 260 aa10.58□□□□□ -0.72
FAM49B-227ENST00000523514 KRT27Q7Z3Y8 459 aa10.58□□□□□ -0.72
FAM49B-227ENST00000523514 ZNF467Q7Z7K2 595 aaPredicted RBP10.58□□□□□ -0.72
FAM49B-227ENST00000523514 BCL11BQ9C0K0 894 aaPredicted RBP10.58□□□□□ -0.72
FAM49B-227ENST00000523514 USP35Q9P2H5 1018 aa10.58□□□□□ -0.72
FAM49B-227ENST00000523514 EP400Q96L91 3159 aa10.58□□□□□ -0.72
FAM49B-227ENST00000523514 MAP2P11137 1827 aaKnown RBP10.58□□□□□ -0.72
FAM49B-227ENST00000523514 ANKRD24Q8TF21 1146 aa10.57□□□□□ -0.72
FAM49B-227ENST00000523514 PEAK1Q9H792 1746 aa10.57□□□□□ -0.72
FAM49B-227ENST00000523514 INSRP06213 1382 aa10.56□□□□□ -0.72
FAM49B-227ENST00000523514 NPC1L1Q9UHC9 1359 aa10.56□□□□□ -0.72
FAM49B-227ENST00000523514 LRRC37A3O60309 1634 aa10.56□□□□□ -0.72
FAM49B-227ENST00000523514 RRS1Q15050 365 aaKnown RBP10.56□□□□□ -0.72
FAM49B-227ENST00000523514 PCDHB8Q9UN66 801 aa10.56□□□□□ -0.72
FAM49B-227ENST00000523514 PCDHB13Q9Y5F0 798 aa10.56□□□□□ -0.72
FAM49B-227ENST00000523514 MORC1Q86VD1 984 aa10.55□□□□□ -0.72
FAM49B-227ENST00000523514 CCDC125Q86Z20 511 aa10.55□□□□□ -0.72
FAM49B-227ENST00000523514 UPF1Q92900 1129 aaKnown RBP eCLIP10.55□□□□□ -0.72
FAM49B-227ENST00000523514 PHF12Q96QT6 1004 aa10.55□□□□□ -0.72
FAM49B-227ENST00000523514 NLRP2Q9NX02 1062 aa10.55□□□□□ -0.72
FAM49B-227ENST00000523514 STK24Q9Y6E0 443 aa10.55□□□□□ -0.72
FAM49B-227ENST00000523514 DISP2A7MBM2 1401 aa10.55□□□□□ -0.72
FAM49B-227ENST00000523514 RGPD1P0DJD0 1748 aa10.54□□□□□ -0.72
FAM49B-227ENST00000523514 PDE3BQ13370 1112 aa10.54□□□□□ -0.72
FAM49B-227ENST00000523514 DDB1Q16531 1140 aa10.54□□□□□ -0.72
FAM49B-227ENST00000523514 KIF12Q96FN5 646 aa10.54□□□□□ -0.72
FAM49B-227ENST00000523514 TNS2Q63HR2 1409 aa10.53□□□□□ -0.72
FAM49B-227ENST00000523514 PER1O15534 1290 aaPredicted RBP10.53□□□□□ -0.72
FAM49B-227ENST00000523514 GTPBP6O43824 516 aaPredicted RBP10.53□□□□□ -0.72
FAM49B-227ENST00000523514 FBLN1P23142 703 aa10.53□□□□□ -0.72
FAM49B-227ENST00000523514 LTV1Q96GA3 475 aaPredicted RBP10.53□□□□□ -0.72
FAM49B-227ENST00000523514 TSHZ2Q9NRE2 1034 aa10.53□□□□□ -0.72
FAM49B-227ENST00000523514 EMILIN1Q9Y6C2 1016 aa10.53□□□□□ -0.72
FAM49B-227ENST00000523514 RGPD2P0DJD1 1756 aa10.52□□□□□ -0.72
FAM49B-227ENST00000523514 OVOS2A0A0G2JMS6 1433 aa10.52□□□□□ -0.73
FAM49B-227ENST00000523514 MAP3K13O43283 966 aa10.52□□□□□ -0.73
FAM49B-227ENST00000523514 IL2RBP14784 551 aa10.52□□□□□ -0.73
FAM49B-227ENST00000523514 PDAP1Q13442 181 aaKnown RBP10.52□□□□□ -0.73
FAM49B-227ENST00000523514 HSP90AB2PQ58FF8 381 aa10.52□□□□□ -0.73
FAM49B-227ENST00000523514 FAM196AQ6ZSG2 479 aa10.52□□□□□ -0.73
FAM49B-227ENST00000523514 POLKQ9UBT6 870 aa10.52□□□□□ -0.73
FAM49B-227ENST00000523514 PPM1GO15355 546 aaPredicted RBP10.51□□□□□ -0.73
FAM49B-227ENST00000523514 TNNT2P45379 298 aaPredicted RBP10.51□□□□□ -0.73
FAM49B-227ENST00000523514 SF3B2Q13435 895 aaKnown RBP10.51□□□□□ -0.73
FAM49B-227ENST00000523514 IFNL1Q8IU54 200 aa10.51□□□□□ -0.73
FAM49B-227ENST00000523514 EXOC5O00471 708 aa10.5□□□□□ -0.73
FAM49B-227ENST00000523514 PLEKHG2Q9H7P9 1386 aa10.5□□□□□ -0.73
FAM49B-227ENST00000523514 TNS1Q9HBL0 1735 aaKnown RBP10.5□□□□□ -0.73
FAM49B-227ENST00000523514 BCL9O00512 1426 aa10.5□□□□□ -0.73
FAM49B-227ENST00000523514 NCAPD2Q15021 1401 aa10.5□□□□□ -0.73
FAM49B-227ENST00000523514 CLCN6P51797 869 aa10.49□□□□□ -0.73
FAM49B-227ENST00000523514 CC2D1BQ5T0F9 858 aaKnown RBP10.49□□□□□ -0.73
FAM49B-227ENST00000523514 PSEN1P49768 467 aa10.48□□□□□ -0.73
FAM49B-227ENST00000523514 NBPF6Q5VWK0 638 aa10.48□□□□□ -0.73
FAM49B-227ENST00000523514 RAPGEF4Q8WZA2 1011 aa10.48□□□□□ -0.73
FAM49B-227ENST00000523514 NBPF4Q96M43 638 aa10.48□□□□□ -0.73
FAM49B-227ENST00000523514 SBF2Q86WG5 1849 aa10.48□□□□□ -0.73
FAM49B-227ENST00000523514 MEGF6O75095 1541 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms