RNA–Protein interactions for RNA: ENST00000520865.5

CTNNA1-225, Transcript of catenin alpha 1, humanhuman

TSL 5

Gene CTNNA1, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-225ENST00000520865 DZIP3Q86Y13 1208 aaKnown RBP9.46□□□□□ -0.9
CTNNA1-225ENST00000520865 CDCA7Q9BWT1 371 aaPredicted RBP9.46□□□□□ -0.9
CTNNA1-225ENST00000520865 C1QTNF2Q9BXJ5 285 aa9.46□□□□□ -0.9
CTNNA1-225ENST00000520865 CUX1P39880 1505 aa9.46□□□□□ -0.9
CTNNA1-225ENST00000520865 FAM196BA6NMK8 535 aa9.45□□□□□ -0.9
CTNNA1-225ENST00000520865 DKK1O94907 266 aa9.45□□□□□ -0.9
CTNNA1-225ENST00000520865 KIAA1024Q9UPX6 916 aa9.45□□□□□ -0.9
CTNNA1-225ENST00000520865 RASA1P20936 1047 aa9.44□□□□□ -0.9
CTNNA1-225ENST00000520865 MCCD1P59942 119 aaPredicted RBP9.44□□□□□ -0.9
CTNNA1-225ENST00000520865 PDE4CQ08493 712 aa9.44□□□□□ -0.9
CTNNA1-225ENST00000520865 KCNA1Q09470 495 aa9.44□□□□□ -0.9
CTNNA1-225ENST00000520865 GRIN2BQ13224 1484 aa9.44□□□□□ -0.9
CTNNA1-225ENST00000520865 SYNJ1O43426 1573 aa9.43□□□□□ -0.9
CTNNA1-225ENST00000520865 MAGI1Q96QZ7 1491 aaPredicted RBP9.43□□□□□ -0.9
CTNNA1-225ENST00000520865 RNF223E7ERA6 249 aa9.43□□□□□ -0.9
CTNNA1-225ENST00000520865 SKOR1P84550 965 aa9.43□□□□□ -0.9
CTNNA1-225ENST00000520865 BPHLQ86WA6 291 aaPredicted RBP9.43□□□□□ -0.9
CTNNA1-225ENST00000520865 CCDC9Q9Y3X0 531 aaKnown RBP9.43□□□□□ -0.9
CTNNA1-225ENST00000520865 CLASP1Q7Z460 1538 aa9.42□□□□□ -0.9
CTNNA1-225ENST00000520865 SYNJ2O15056 1496 aa9.42□□□□□ -0.9
CTNNA1-225ENST00000520865 ZBTB7BO15156 539 aaPredicted RBP9.42□□□□□ -0.9
CTNNA1-225ENST00000520865 AGERQ15109 404 aa9.42□□□□□ -0.9
CTNNA1-225ENST00000520865 IVNS1ABPQ9Y6Y0 642 aa9.42□□□□□ -0.9
CTNNA1-225ENST00000520865 ESPNB1AK53 854 aa9.41□□□□□ -0.9
CTNNA1-225ENST00000520865 ITGBL1O95965 494 aaPredicted RBP9.41□□□□□ -0.9
CTNNA1-225ENST00000520865 MAP7D1Q3KQU3 841 aa9.41□□□□□ -0.9
CTNNA1-225ENST00000520865 OGFOD1Q8N543 542 aa9.41□□□□□ -0.9
CTNNA1-225ENST00000520865 GAPVD1Q14C86 1478 aa9.4□□□□□ -0.9
CTNNA1-225ENST00000520865 ATP5J2-PTCD1G3V325 749 aa9.4□□□□□ -0.9
CTNNA1-225ENST00000520865 SCNN1AP37088 669 aa9.4□□□□□ -0.9
CTNNA1-225ENST00000520865 DPYDQ12882 1025 aa9.4□□□□□ -0.9
CTNNA1-225ENST00000520865 OXLD1Q5BKU9 147 aa9.4□□□□□ -0.9
CTNNA1-225ENST00000520865 ANKMY2Q8IV38 441 aa9.4□□□□□ -0.9
CTNNA1-225ENST00000520865 ZNF594Q96JF6 807 aaPredicted RBP9.4□□□□□ -0.9
CTNNA1-225ENST00000520865 DOLKQ9UPQ8 538 aa9.4□□□□□ -0.9
CTNNA1-225ENST00000520865 WDR97A6NE52 1622 aa9.4□□□□□ -0.9
CTNNA1-225ENST00000520865 EML3Q32P44 896 aa9.39□□□□□ -0.91
CTNNA1-225ENST00000520865 TRMT44Q8IYL2 757 aaKnown RBP9.39□□□□□ -0.91
CTNNA1-225ENST00000520865 EMID1Q96A84 441 aaPredicted RBP9.39□□□□□ -0.91
CTNNA1-225ENST00000520865 LZTS3O60299 673 aaPredicted RBP9.38□□□□□ -0.91
CTNNA1-225ENST00000520865 KCNC4Q03721 635 aa9.38□□□□□ -0.91
CTNNA1-225ENST00000520865 TRIM32Q13049 653 aa9.38□□□□□ -0.91
CTNNA1-225ENST00000520865 TMCO4Q5TGY1 634 aa9.38□□□□□ -0.91
CTNNA1-225ENST00000520865 LARP1Q6PKG0 1096 aaKnown RBP9.38□□□□□ -0.91
CTNNA1-225ENST00000520865 RGS22Q8NE09 1264 aa9.38□□□□□ -0.91
CTNNA1-225ENST00000520865 ZNF592Q92610 1267 aa9.38□□□□□ -0.91
CTNNA1-225ENST00000520865 PCDHGA11Q9Y5H2 935 aa9.38□□□□□ -0.91
CTNNA1-225ENST00000520865 LOC105371045A0A1W2PR82 267 aa9.37□□□□□ -0.91
CTNNA1-225ENST00000520865 SSFA2P28290 1259 aa9.37□□□□□ -0.91
CTNNA1-225ENST00000520865 MFAP1P55081 439 aaKnown RBP9.37□□□□□ -0.91
CTNNA1-225ENST00000520865 CCER1Q8TC90 406 aaPredicted RBP9.37□□□□□ -0.91
CTNNA1-225ENST00000520865 SLC10A4Q96EP9 437 aa9.37□□□□□ -0.91
CTNNA1-225ENST00000520865 DNAAF2Q9NVR5 837 aaKnown RBP9.37□□□□□ -0.91
CTNNA1-225ENST00000520865 GTF2IP78347 998 aa9.36□□□□□ -0.91
CTNNA1-225ENST00000520865 TXNDC2Q86VQ3 553 aa9.36□□□□□ -0.91
CTNNA1-225ENST00000520865 FAM200AQ8TCP9 573 aa9.36□□□□□ -0.91
CTNNA1-225ENST00000520865 UBE2Q2Q8WVN8 375 aa9.36□□□□□ -0.91
CTNNA1-225ENST00000520865 NOD1Q9Y239 953 aa9.36□□□□□ -0.91
CTNNA1-225ENST00000520865 SUPT16HQ9Y5B9 1047 aaKnown RBP9.36□□□□□ -0.91
CTNNA1-225ENST00000520865 PBRM1Q86U86 1689 aa9.36□□□□□ -0.91
CTNNA1-225ENST00000520865 LGR5O75473 907 aa9.35□□□□□ -0.91
CTNNA1-225ENST00000520865 SCTRP47872 440 aa9.35□□□□□ -0.91
CTNNA1-225ENST00000520865 PPP1R18Q6NYC8 613 aa9.35□□□□□ -0.91
CTNNA1-225ENST00000520865 ANKLE1Q8NAG6 615 aa9.35□□□□□ -0.91
CTNNA1-225ENST00000520865 CLP1Q92989 425 aaKnown RBP9.35□□□□□ -0.91
CTNNA1-225ENST00000520865 MTMR7Q9Y216 660 aa9.35□□□□□ -0.91
CTNNA1-225ENST00000520865 PCDHB11Q9Y5F2 797 aa9.35□□□□□ -0.91
CTNNA1-225ENST00000520865 ABCA10Q8WWZ4 1543 aa9.35□□□□□ -0.91
CTNNA1-225ENST00000520865 SFI1A8K8P3 1242 aa9.34□□□□□ -0.91
CTNNA1-225ENST00000520865 RAB15P59190 212 aa9.34□□□□□ -0.91
CTNNA1-225ENST00000520865 INTS6LQ5JSJ4 861 aaKnown RBP9.34□□□□□ -0.91
CTNNA1-225ENST00000520865 SPNS2Q8IVW8 549 aa9.34□□□□□ -0.91
CTNNA1-225ENST00000520865 SIX5Q8N196 739 aa9.34□□□□□ -0.91
CTNNA1-225ENST00000520865 RNF166Q96A37 237 aaPredicted RBP9.34□□□□□ -0.91
CTNNA1-225ENST00000520865 KCTD15Q96SI1 283 aaPredicted RBP9.34□□□□□ -0.91
CTNNA1-225ENST00000520865 PCDH10Q9P2E7 1040 aa9.34□□□□□ -0.91
CTNNA1-225ENST00000520865 HCSTQ9UBK5 93 aa9.34□□□□□ -0.91
CTNNA1-225ENST00000520865 GNEQ9Y223 722 aaKnown RBP9.34□□□□□ -0.91
CTNNA1-225ENST00000520865 WRNQ14191 1432 aaPredicted RBP eCLIP9.33□□□□□ -0.92
CTNNA1-225ENST00000520865 NPM2Q86SE8 214 aaKnown RBP9.33□□□□□ -0.92
CTNNA1-225ENST00000520865 LARGE2Q8N3Y3 721 aa9.33□□□□□ -0.92
CTNNA1-225ENST00000520865 ABCA5Q8WWZ7 1642 aa9.32□□□□□ -0.92
CTNNA1-225ENST00000520865 NBPF20Q3BBV1 942 aa9.32□□□□□ -0.92
CTNNA1-225ENST00000520865 LIAT1Q6ZQX7 453 aa9.32□□□□□ -0.92
CTNNA1-225ENST00000520865 TRIM50Q86XT4 487 aa9.32□□□□□ -0.92
CTNNA1-225ENST00000520865 TPCN2Q8NHX9 752 aa9.32□□□□□ -0.92
CTNNA1-225ENST00000520865 GRIN2AQ12879 1464 aa9.32□□□□□ -0.92
CTNNA1-225ENST00000520865 PATL2C9JE40 543 aaKnown RBP9.31□□□□□ -0.92
CTNNA1-225ENST00000520865 ERVH48-1M5A8F1 160 aa9.31□□□□□ -0.92
CTNNA1-225ENST00000520865 STAU1O95793 577 aaKnown RBP9.31□□□□□ -0.92
CTNNA1-225ENST00000520865 OCLNQ16625 522 aa9.31□□□□□ -0.92
CTNNA1-225ENST00000520865 RNF20Q5VTR2 975 aa9.31□□□□□ -0.92
CTNNA1-225ENST00000520865 CCDC102BQ68D86 513 aa9.31□□□□□ -0.92
CTNNA1-225ENST00000520865 ERCC6L2Q5T890 1561 aa9.31□□□□□ -0.92
CTNNA1-225ENST00000520865 ZBTB24O43167 697 aaPredicted RBP9.3□□□□□ -0.92
CTNNA1-225ENST00000520865 ATP2B4P23634 1241 aa9.3□□□□□ -0.92
CTNNA1-225ENST00000520865 VARSP26640 1264 aaKnown RBP9.3□□□□□ -0.92
CTNNA1-225ENST00000520865 ATP1A2P50993 1020 aa9.3□□□□□ -0.92
CTNNA1-225ENST00000520865 WNT7BP56706 349 aa9.3□□□□□ -0.92
CTNNA1-225ENST00000520865 FOXD4L5Q5VV16 416 aaPredicted RBP9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms