RNA–Protein interactions for RNA: ENST00000520260.5

CTNNA1-220, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 710 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-220ENST00000520260 PLEKHG2Q9H7P9 1386 aa7.57□□□□□ -1.2
CTNNA1-220ENST00000520260 PLCH1Q4KWH8 1693 aa7.57□□□□□ -1.2
CTNNA1-220ENST00000520260 FAM208AQ9UK61 1670 aaKnown RBP7.57□□□□□ -1.2
CTNNA1-220ENST00000520260 WDR17Q8IZU2 1322 aa7.56□□□□□ -1.2
CTNNA1-220ENST00000520260 ATRNO75882 1429 aa7.56□□□□□ -1.2
CTNNA1-220ENST00000520260 FAM83GA6ND36 823 aa7.56□□□□□ -1.2
CTNNA1-220ENST00000520260 PPM1GO15355 546 aaPredicted RBP7.56□□□□□ -1.2
CTNNA1-220ENST00000520260 IP6K1Q92551 441 aa7.56□□□□□ -1.2
CTNNA1-220ENST00000520260 PNNQ9H307 717 aaKnown RBP7.56□□□□□ -1.2
CTNNA1-220ENST00000520260 NUDCQ9Y266 331 aa7.56□□□□□ -1.2
CTNNA1-220ENST00000520260 PDE3BQ13370 1112 aa7.55□□□□□ -1.2
CTNNA1-220ENST00000520260 RALBP1Q15311 655 aa7.55□□□□□ -1.2
CTNNA1-220ENST00000520260 BARGINQ6ZT62 677 aa7.55□□□□□ -1.2
CTNNA1-220ENST00000520260 CCDC125Q86Z20 511 aa7.55□□□□□ -1.2
CTNNA1-220ENST00000520260 RAPGEF4Q8WZA2 1011 aa7.55□□□□□ -1.2
CTNNA1-220ENST00000520260 TSHZ2Q9NRE2 1034 aa7.55□□□□□ -1.2
CTNNA1-220ENST00000520260 NLRP2Q9NX02 1062 aa7.55□□□□□ -1.2
CTNNA1-220ENST00000520260 ANKRD26Q9UPS8 1709 aa7.55□□□□□ -1.2
CTNNA1-220ENST00000520260 SPATA31A5Q5VU36 1347 aa7.54□□□□□ -1.2
CTNNA1-220ENST00000520260 SPATA31A7Q8IWB4 1347 aa7.54□□□□□ -1.2
CTNNA1-220ENST00000520260 NFAT5O94916 1531 aa7.54□□□□□ -1.2
CTNNA1-220ENST00000520260 ST18O60284 1047 aa7.54□□□□□ -1.2
CTNNA1-220ENST00000520260 CHRNA2Q15822 529 aa7.54□□□□□ -1.2
CTNNA1-220ENST00000520260 ANKRD24Q8TF21 1146 aa7.54□□□□□ -1.2
CTNNA1-220ENST00000520260 CARD10Q9BWT7 1032 aa7.54□□□□□ -1.2
CTNNA1-220ENST00000520260 CRYBG1Q9Y4K1 1723 aa7.54□□□□□ -1.2
CTNNA1-220ENST00000520260 INSRP06213 1382 aa7.54□□□□□ -1.2
CTNNA1-220ENST00000520260 COL5A2P05997 1499 aaPredicted RBP7.54□□□□□ -1.2
CTNNA1-220ENST00000520260 BCL9LQ86UU0 1499 aa7.54□□□□□ -1.2
CTNNA1-220ENST00000520260 ERBB3P21860 1342 aa7.53□□□□□ -1.2
CTNNA1-220ENST00000520260 SPATA31A1Q5TZJ5 1347 aa7.53□□□□□ -1.2
CTNNA1-220ENST00000520260 HOXC9P31274 260 aa7.53□□□□□ -1.2
CTNNA1-220ENST00000520260 MAP3K19Q56UN5 1328 aa7.52□□□□□ -1.2
CTNNA1-220ENST00000520260 EXOC5O00471 708 aa7.52□□□□□ -1.21
CTNNA1-220ENST00000520260 IL2RBP14784 551 aa7.52□□□□□ -1.21
CTNNA1-220ENST00000520260 TATP17735 454 aaPredicted RBP7.52□□□□□ -1.21
CTNNA1-220ENST00000520260 TNNT2P45379 298 aaPredicted RBP7.52□□□□□ -1.21
CTNNA1-220ENST00000520260 ATN1P54259 1190 aaPredicted RBP7.52□□□□□ -1.21
CTNNA1-220ENST00000520260 DDB1Q16531 1140 aa7.52□□□□□ -1.21
CTNNA1-220ENST00000520260 CARD14Q9BXL6 1004 aa7.52□□□□□ -1.21
CTNNA1-220ENST00000520260 USP35Q9P2H5 1018 aa7.52□□□□□ -1.21
CTNNA1-220ENST00000520260 LTN1O94822 1766 aa7.51□□□□□ -1.21
CTNNA1-220ENST00000520260 LMO7Q8WWI1 1683 aa7.51□□□□□ -1.21
CTNNA1-220ENST00000520260 ANP32CO43423 234 aa7.51□□□□□ -1.21
CTNNA1-220ENST00000520260 HSP90AB1P08238 724 aaKnown RBP7.51□□□□□ -1.21
CTNNA1-220ENST00000520260 FAM98CQ17RN3 349 aaKnown RBP7.51□□□□□ -1.21
CTNNA1-220ENST00000520260 AMER1Q5JTC6 1135 aaPredicted RBP7.51□□□□□ -1.21
CTNNA1-220ENST00000520260 CC2D1BQ5T0F9 858 aaKnown RBP7.51□□□□□ -1.21
CTNNA1-220ENST00000520260 FAM196AQ6ZSG2 479 aa7.51□□□□□ -1.21
CTNNA1-220ENST00000520260 KRT27Q7Z3Y8 459 aa7.51□□□□□ -1.21
CTNNA1-220ENST00000520260 SPG7Q9UQ90 795 aa7.51□□□□□ -1.21
CTNNA1-220ENST00000520260 OVOS2A0A0G2JMS6 1433 aa7.51□□□□□ -1.21
CTNNA1-220ENST00000520260 NRAPQ86VF7 1730 aa7.5□□□□□ -1.21
CTNNA1-220ENST00000520260 ONECUT3O60422 494 aaPredicted RBP7.5□□□□□ -1.21
CTNNA1-220ENST00000520260 DIAPH1O60610 1272 aaKnown RBP7.5□□□□□ -1.21
CTNNA1-220ENST00000520260 RRS1Q15050 365 aaKnown RBP7.5□□□□□ -1.21
CTNNA1-220ENST00000520260 AMOTQ4VCS5 1084 aa7.5□□□□□ -1.21
CTNNA1-220ENST00000520260 LARP1Q6PKG0 1096 aaKnown RBP7.5□□□□□ -1.21
CTNNA1-220ENST00000520260 SEPT12Q8IYM1 358 aa7.5□□□□□ -1.21
CTNNA1-220ENST00000520260 LTV1Q96GA3 475 aaPredicted RBP7.5□□□□□ -1.21
CTNNA1-220ENST00000520260 CAMTA1Q9Y6Y1 1673 aa7.5□□□□□ -1.21
CTNNA1-220ENST00000520260 PCDH11XQ9BZA7 1347 aa7.5□□□□□ -1.21
CTNNA1-220ENST00000520260 PCDH11YQ9BZA8 1340 aa7.5□□□□□ -1.21
CTNNA1-220ENST00000520260 DDX10Q13206 875 aaKnown RBP7.49□□□□□ -1.21
CTNNA1-220ENST00000520260 POTEAQ6S8J7 498 aa7.49□□□□□ -1.21
CTNNA1-220ENST00000520260 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.49□□□□□ -1.213e-8■□□□□ 11.1
CTNNA1-220ENST00000520260 MYBBP1AQ9BQG0 1328 aaKnown RBP7.49□□□□□ -1.21
CTNNA1-220ENST00000520260 RGS12O14924 1447 aa7.48□□□□□ -1.21
CTNNA1-220ENST00000520260 PER1O15534 1290 aaPredicted RBP7.48□□□□□ -1.21
CTNNA1-220ENST00000520260 WDR43Q15061 677 aaKnown RBP eCLIP7.48□□□□□ -1.21
CTNNA1-220ENST00000520260 C1orf141Q5JVX7 400 aa7.48□□□□□ -1.21
CTNNA1-220ENST00000520260 TNS2Q63HR2 1409 aa7.48□□□□□ -1.21
CTNNA1-220ENST00000520260 BCL11AQ9H165 835 aa7.48□□□□□ -1.21
CTNNA1-220ENST00000520260 POLKQ9UBT6 870 aa7.48□□□□□ -1.21
CTNNA1-220ENST00000520260 PARP4Q9UKK3 1724 aaKnown RBP7.47□□□□□ -1.21
CTNNA1-220ENST00000520260 SOCS7O14512 581 aa7.47□□□□□ -1.21
CTNNA1-220ENST00000520260 BAG6P46379 1132 aa7.47□□□□□ -1.21
CTNNA1-220ENST00000520260 MTHFSP49914 203 aa7.47□□□□□ -1.21
CTNNA1-220ENST00000520260 PLEKHO1Q53GL0 409 aaPredicted RBP7.47□□□□□ -1.21
CTNNA1-220ENST00000520260 ILDR2Q71H61 639 aa7.47□□□□□ -1.21
CTNNA1-220ENST00000520260 ZCRB1Q8TBF4 217 aaKnown RBP7.47□□□□□ -1.21
CTNNA1-220ENST00000520260 RGS17Q9UGC6 210 aaPredicted RBP7.47□□□□□ -1.21
CTNNA1-220ENST00000520260 EMILIN1Q9Y6C2 1016 aa7.47□□□□□ -1.21
CTNNA1-220ENST00000520260 MAPK8IP3Q9UPT6 1336 aa7.47□□□□□ -1.21
CTNNA1-220ENST00000520260 PARD3Q8TEW0 1356 aa7.46□□□□□ -1.21
CTNNA1-220ENST00000520260 U2SURPO15042 1029 aaKnown RBP7.46□□□□□ -1.22
CTNNA1-220ENST00000520260 CNGB1Q14028 1251 aaPredicted RBP7.46□□□□□ -1.22
CTNNA1-220ENST00000520260 HSP90AB2PQ58FF8 381 aa7.46□□□□□ -1.22
CTNNA1-220ENST00000520260 AXIN2Q9Y2T1 843 aa7.46□□□□□ -1.22
CTNNA1-220ENST00000520260 GLI3P10071 1580 aa7.46□□□□□ -1.22
CTNNA1-220ENST00000520260 THSD7AQ9UPZ6 1657 aa7.45□□□□□ -1.22
CTNNA1-220ENST00000520260 LMOD3Q0VAK6 560 aa7.45□□□□□ -1.22
CTNNA1-220ENST00000520260 EIF4A2Q14240 407 aaKnown RBP7.45□□□□□ -1.22
CTNNA1-220ENST00000520260 GAS2L2Q8NHY3 880 aa7.45□□□□□ -1.22
CTNNA1-220ENST00000520260 COL18A1P39060 1754 aa7.45□□□□□ -1.22
CTNNA1-220ENST00000520260 IGSF1Q8N6C5 1336 aa7.45□□□□□ -1.22
CTNNA1-220ENST00000520260 BCL9O00512 1426 aa7.44□□□□□ -1.22
CTNNA1-220ENST00000520260 MAP2P11137 1827 aaKnown RBP7.44□□□□□ -1.22
CTNNA1-220ENST00000520260 U2AF1L5P0DN76 240 aaPredicted RBP7.44□□□□□ -1.22
CTNNA1-220ENST00000520260 PPP2R1AP30153 589 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms