RNA–Protein interactions for RNA: ENST00000510224.5

PROM1-210, Transcript of prominin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PROM1, Length 4,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-210ENST00000510224 LTN1O94822 1766 aa10.72□□□□□ -0.69
PROM1-210ENST00000510224 AMER1Q5JTC6 1135 aaPredicted RBP10.71□□□□□ -0.69
PROM1-210ENST00000510224 EYA1Q99502 592 aa10.71□□□□□ -0.69
PROM1-210ENST00000510224 TNS2Q63HR2 1409 aa10.71□□□□□ -0.7
PROM1-210ENST00000510224 DCAF8L1A6NGE4 600 aa10.7□□□□□ -0.7
PROM1-210ENST00000510224 COL18A1P39060 1754 aa10.7□□□□□ -0.7
PROM1-210ENST00000510224 PER1O15534 1290 aaPredicted RBP10.7□□□□□ -0.7
PROM1-210ENST00000510224 PELP1Q8IZL8 1130 aaKnown RBP10.7□□□□□ -0.7
PROM1-210ENST00000510224 CCNL1Q9UK58 526 aaPredicted RBP10.7□□□□□ -0.7
PROM1-210ENST00000510224 PARD3Q8TEW0 1356 aa10.69□□□□□ -0.7
PROM1-210ENST00000510224 SLC15A2Q16348 729 aa10.69□□□□□ -0.7
PROM1-210ENST00000510224 RGPD1P0DJD0 1748 aa10.69□□□□□ -0.7
PROM1-210ENST00000510224 SPG7Q9UQ90 795 aa10.69□□□□□ -0.7
PROM1-210ENST00000510224 INSRP06213 1382 aa10.69□□□□□ -0.7
PROM1-210ENST00000510224 EIF4A2Q14240 407 aaKnown RBP10.68□□□□□ -0.7
PROM1-210ENST00000510224 DISP2A7MBM2 1401 aa10.68□□□□□ -0.7
PROM1-210ENST00000510224 HMOX1P09601 288 aa10.68□□□□□ -0.7
PROM1-210ENST00000510224 CFAP53Q96M91 514 aa10.68□□□□□ -0.7
PROM1-210ENST00000510224 LRRC4BQ9NT99 713 aa10.68□□□□□ -0.7
PROM1-210ENST00000510224 MEGF6O75095 1541 aa10.67□□□□□ -0.7
PROM1-210ENST00000510224 LRRC37A3O60309 1634 aa10.67□□□□□ -0.7
PROM1-210ENST00000510224 PCDH11XQ9BZA7 1347 aa10.67□□□□□ -0.7
PROM1-210ENST00000510224 PCDH11YQ9BZA8 1340 aa10.67□□□□□ -0.7
PROM1-210ENST00000510224 CYP27B1O15528 508 aa10.67□□□□□ -0.7
PROM1-210ENST00000510224 SULT6B1Q6IMI4 303 aa10.67□□□□□ -0.7
PROM1-210ENST00000510224 PHF14O94880 888 aa10.67□□□□□ -0.7
PROM1-210ENST00000510224 AEBP1Q8IUX7 1158 aa10.67□□□□□ -0.7
PROM1-210ENST00000510224 SENP3-EIF4A1A0A087X0R7 540 aa10.66□□□□□ -0.7
PROM1-210ENST00000510224 RTL1A6NKG5 1358 aa10.66□□□□□ -0.7
PROM1-210ENST00000510224 RBM42Q9BTD8 480 aaKnown RBP10.66□□□□□ -0.7
PROM1-210ENST00000510224 WWC3Q9ULE0 1092 aa10.66□□□□□ -0.7
PROM1-210ENST00000510224 PARP4Q9UKK3 1724 aaKnown RBP10.66□□□□□ -0.7
PROM1-210ENST00000510224 MSL1Q68DK7 614 aa10.66□□□□□ -0.7
PROM1-210ENST00000510224 TMOD3Q9NYL9 352 aa10.66□□□□□ -0.7
PROM1-210ENST00000510224 UTRNP46939 3433 aa10.66□□□□□ -0.7
PROM1-210ENST00000510224 ANP32CO43423 234 aa10.66□□□□□ -0.7
PROM1-210ENST00000510224 ZNF530Q6P9A1 599 aaPredicted RBP10.66□□□□□ -0.7
PROM1-210ENST00000510224 SMIM5Q71RC9 77 aa10.65□□□□□ -0.7
PROM1-210ENST00000510224 GOLGB1Q14789 3259 aaKnown RBP10.65□□□□□ -0.7
PROM1-210ENST00000510224 ZNF827Q17R98 1081 aa10.65□□□□□ -0.7
PROM1-210ENST00000510224 MYOM1P52179 1685 aa10.65□□□□□ -0.7
PROM1-210ENST00000510224 DIAPH1O60610 1272 aaKnown RBP10.65□□□□□ -0.71
PROM1-210ENST00000510224 U2AF1L5P0DN76 240 aaPredicted RBP10.65□□□□□ -0.71
PROM1-210ENST00000510224 U2AF1Q01081 240 aaKnown RBP eCLIP10.65□□□□□ -0.71
PROM1-210ENST00000510224 C1orf141Q5JVX7 400 aa10.65□□□□□ -0.71
PROM1-210ENST00000510224 IFNL2Q8IZJ0 200 aa10.64□□□□□ -0.71
PROM1-210ENST00000510224 NSD2O96028 1365 aa10.64□□□□□ -0.71
PROM1-210ENST00000510224 PPP2R1AP30153 589 aa10.64□□□□□ -0.71
PROM1-210ENST00000510224 TNS1Q9HBL0 1735 aaKnown RBP10.64□□□□□ -0.71
PROM1-210ENST00000510224 PTCD1O75127 700 aaKnown RBP10.64□□□□□ -0.71
PROM1-210ENST00000510224 PLEKHO1Q53GL0 409 aaPredicted RBP10.63□□□□□ -0.71
PROM1-210ENST00000510224 RGPD2P0DJD1 1756 aa10.63□□□□□ -0.71
PROM1-210ENST00000510224 NUDCQ9Y266 331 aa10.63□□□□□ -0.71
PROM1-210ENST00000510224 PIGBQ92521 554 aa10.62□□□□□ -0.71
PROM1-210ENST00000510224 AK7Q96M32 723 aa10.62□□□□□ -0.71
PROM1-210ENST00000510224 POLD1P28340 1107 aa10.62□□□□□ -0.71
PROM1-210ENST00000510224 CABP4P57796 275 aa10.62□□□□□ -0.71
PROM1-210ENST00000510224 ASAP1Q9ULH1 1129 aa10.62□□□□□ -0.71
PROM1-210ENST00000510224 NEFMP07197 916 aa10.62□□□□□ -0.71
PROM1-210ENST00000510224 SLC27A3Q5K4L6 730 aa10.62□□□□□ -0.71
PROM1-210ENST00000510224 FHDC1Q9C0D6 1143 aaPredicted RBP10.62□□□□□ -0.71
PROM1-210ENST00000510224 MTFR1LQ9H019 292 aa10.62□□□□□ -0.71
PROM1-210ENST00000510224 ATP6V1AP38606 617 aa10.61□□□□□ -0.71
PROM1-210ENST00000510224 PALLDQ8WX93 1383 aa10.61□□□□□ -0.71
PROM1-210ENST00000510224 MAP2P11137 1827 aaKnown RBP10.61□□□□□ -0.71
PROM1-210ENST00000510224 PHKG2P15735 406 aa10.61□□□□□ -0.71
PROM1-210ENST00000510224 ARXQ96QS3 562 aa10.61□□□□□ -0.71
PROM1-210ENST00000510224 KIF20BQ96Q89 1820 aa10.6□□□□□ -0.71
PROM1-210ENST00000510224 SMARCC1Q92922 1105 aaPredicted RBP10.6□□□□□ -0.71
PROM1-210ENST00000510224 KIF24Q5T7B8 1368 aa10.6□□□□□ -0.71
PROM1-210ENST00000510224 ABCC6O95255 1503 aa10.6□□□□□ -0.71
PROM1-210ENST00000510224 WDR43Q15061 677 aaKnown RBP eCLIP10.6□□□□□ -0.71
PROM1-210ENST00000510224 RALBP1Q15311 655 aa10.6□□□□□ -0.71
PROM1-210ENST00000510224 GPR162Q16538 588 aa10.6□□□□□ -0.71
PROM1-210ENST00000510224 SBF2Q86WG5 1849 aa10.59□□□□□ -0.71
PROM1-210ENST00000510224 NEUROD2Q15784 382 aa10.59□□□□□ -0.71
PROM1-210ENST00000510224 GNPATO15228 680 aa10.59□□□□□ -0.71
PROM1-210ENST00000510224 PRKRIP1Q9H875 184 aaPredicted RBP10.59□□□□□ -0.71
PROM1-210ENST00000510224 LOC102724428A0A0B4J2F2 783 aa10.59□□□□□ -0.71
PROM1-210ENST00000510224 SIK1P57059 783 aa10.59□□□□□ -0.71
PROM1-210ENST00000510224 NFATC2IPQ8NCF5 419 aa10.59□□□□□ -0.71
PROM1-210ENST00000510224 ZNF330Q9Y3S2 320 aaPredicted RBP10.59□□□□□ -0.71
PROM1-210ENST00000510224 SYT17Q9BSW7 474 aa10.58□□□□□ -0.72
PROM1-210ENST00000510224 MRS2Q9HD23 443 aa10.58□□□□□ -0.72
PROM1-210ENST00000510224 PEAK1Q9H792 1746 aa10.58□□□□□ -0.72
PROM1-210ENST00000510224 COL23A1Q86Y22 540 aaPredicted RBP10.58□□□□□ -0.72
PROM1-210ENST00000510224 YY1P25490 414 aa10.57□□□□□ -0.72
PROM1-210ENST00000510224 DIEXFQ68CQ4 756 aaKnown RBP10.57□□□□□ -0.72
PROM1-210ENST00000510224 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.57□□□□□ -0.72
PROM1-210ENST00000510224 HSP90AB1P08238 724 aaKnown RBP10.57□□□□□ -0.72
PROM1-210ENST00000510224 AMOTQ4VCS5 1084 aa10.57□□□□□ -0.72
PROM1-210ENST00000510224 BCL9O00512 1426 aa10.57□□□□□ -0.72
PROM1-210ENST00000510224 PNPLA7Q6ZV29 1317 aa10.57□□□□□ -0.72
PROM1-210ENST00000510224 PRKAR2BP31323 418 aa10.57□□□□□ -0.72
PROM1-210ENST00000510224 IL13P35225 146 aa10.57□□□□□ -0.72
PROM1-210ENST00000510224 SALL2Q9Y467 1007 aaPredicted RBP10.57□□□□□ -0.72
PROM1-210ENST00000510224 BTAF1O14981 1849 aa10.57□□□□□ -0.72
PROM1-210ENST00000510224 IGSF1Q8N6C5 1336 aa10.56□□□□□ -0.72
PROM1-210ENST00000510224 CCDC146Q8IYE0 955 aa10.56□□□□□ -0.72
PROM1-210ENST00000510224 MYBBP1AQ9BQG0 1328 aaKnown RBP10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms