RNA–Protein interactions for RNA: ENST00000509006.1

DEPDC1B-204, Transcript of DEP domain containing 1B, humanhuman

TSL 4

Gene DEPDC1B, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-204ENST00000509006 KRTAP4-8Q9BYQ9 185 aa6.07□□□□□ -1.44
DEPDC1B-204ENST00000509006 SLC24A3Q9HC58 644 aa6.07□□□□□ -1.44
DEPDC1B-204ENST00000509006 EPS8L1Q8TE68 723 aa6.06□□□□□ -1.44
DEPDC1B-204ENST00000509006 CYLDQ9NQC7 956 aa6.06□□□□□ -1.44
DEPDC1B-204ENST00000509006 GPSM3Q9Y4H4 160 aa6.06□□□□□ -1.44
DEPDC1B-204ENST00000509006 DBN1Q16643 649 aa6.05□□□□□ -1.44
DEPDC1B-204ENST00000509006 RIPOR1Q6ZS17 1223 aa6.05□□□□□ -1.44
DEPDC1B-204ENST00000509006 PODNQ7Z5L7 613 aa6.05□□□□□ -1.44
DEPDC1B-204ENST00000509006 TRIM22Q8IYM9 498 aa6.05□□□□□ -1.44
DEPDC1B-204ENST00000509006 GALNT6Q8NCL4 622 aa6.05□□□□□ -1.44
DEPDC1B-204ENST00000509006 NEDD1Q8NHV4 660 aa6.05□□□□□ -1.44
DEPDC1B-204ENST00000509006 ACDQ96AP0 544 aa6.05□□□□□ -1.44
DEPDC1B-204ENST00000509006 RSPH6AQ9H0K4 717 aa6.05□□□□□ -1.44
DEPDC1B-204ENST00000509006 BCRP11274 1271 aa6.04□□□□□ -1.44
DEPDC1B-204ENST00000509006 RNF144AP50876 292 aaPredicted RBP6.04□□□□□ -1.44
DEPDC1B-204ENST00000509006 BEND7Q8N7W2 519 aaPredicted RBP6.04□□□□□ -1.44
DEPDC1B-204ENST00000509006 GTPBP3Q969Y2 492 aaKnown RBP6.04□□□□□ -1.44
DEPDC1B-204ENST00000509006 ESPNB1AK53 854 aa6.03□□□□□ -1.44
DEPDC1B-204ENST00000509006 DZIP3Q86Y13 1208 aaKnown RBP6.03□□□□□ -1.44
DEPDC1B-204ENST00000509006 HMX1Q9NP08 348 aaPredicted RBP6.03□□□□□ -1.44
DEPDC1B-204ENST00000509006 FOXR1Q6PIV2 292 aa6.02□□□□□ -1.45
DEPDC1B-204ENST00000509006 GMCL1Q96IK5 515 aa6.02□□□□□ -1.45
DEPDC1B-204ENST00000509006 MEN1O00255 615 aa6.01□□□□□ -1.45
DEPDC1B-204ENST00000509006 AP1G2O75843 785 aa6.01□□□□□ -1.45
DEPDC1B-204ENST00000509006 PROCA1Q8NCQ7 364 aaPredicted RBP6.01□□□□□ -1.45
DEPDC1B-204ENST00000509006 GAS2L1Q99501 681 aaPredicted RBP6.01□□□□□ -1.45
DEPDC1B-204ENST00000509006 ATP5J2-PTCD1G3V325 749 aa6□□□□□ -1.45
DEPDC1B-204ENST00000509006 K7ELQ4 463 aaPredicted RBP6□□□□□ -1.45
DEPDC1B-204ENST00000509006 SNRPNP63162 240 aaKnown RBP6□□□□□ -1.45
DEPDC1B-204ENST00000509006 POU4F2Q12837 409 aa6□□□□□ -1.45
DEPDC1B-204ENST00000509006 PPP2R2DQ66LE6 453 aa6□□□□□ -1.45
DEPDC1B-204ENST00000509006 PSMG3-AS1Q96PY0 264 aa6□□□□□ -1.45
DEPDC1B-204ENST00000509006 GNL3Q9BVP2 549 aaKnown RBP eCLIP6□□□□□ -1.45
DEPDC1B-204ENST00000509006 DYRK1BQ9Y463 629 aa6□□□□□ -1.45
DEPDC1B-204ENST00000509006 A0A1W2PRU2 124 aa5.99□□□□□ -1.45
DEPDC1B-204ENST00000509006 KRBA1A5PL33 1030 aa5.99□□□□□ -1.45
DEPDC1B-204ENST00000509006 MX2P20592 715 aa5.99□□□□□ -1.45
DEPDC1B-204ENST00000509006 TRERF1Q96PN7 1200 aa5.99□□□□□ -1.45
DEPDC1B-204ENST00000509006 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.98□□□□□ -1.45
DEPDC1B-204ENST00000509006 H7C1W4 665 aa5.98□□□□□ -1.45
DEPDC1B-204ENST00000509006 OIP5O43482 229 aa5.98□□□□□ -1.45
DEPDC1B-204ENST00000509006 USP17L8P0C7I0 530 aa5.98□□□□□ -1.45
DEPDC1B-204ENST00000509006 GPC1P35052 558 aa5.98□□□□□ -1.45
DEPDC1B-204ENST00000509006 BAG6P46379 1132 aa5.98□□□□□ -1.45
DEPDC1B-204ENST00000509006 SKIV2LQ15477 1246 aaKnown RBP5.98□□□□□ -1.45
DEPDC1B-204ENST00000509006 SEPT12Q8IYM1 358 aa5.98□□□□□ -1.45
DEPDC1B-204ENST00000509006 ATP1B4Q9UN42 357 aaPredicted RBP5.98□□□□□ -1.45
DEPDC1B-204ENST00000509006 SHISA8B8ZZ34 492 aa5.97□□□□□ -1.45
DEPDC1B-204ENST00000509006 GIGYF1O75420 1035 aaPredicted RBP5.97□□□□□ -1.45
DEPDC1B-204ENST00000509006 SH3D19Q5HYK7 790 aa5.97□□□□□ -1.45
DEPDC1B-204ENST00000509006 SLC27A3Q5K4L6 730 aa5.97□□□□□ -1.45
DEPDC1B-204ENST00000509006 Q8N3U1 123 aa5.97□□□□□ -1.45
DEPDC1B-204ENST00000509006 PNMA1Q8ND90 353 aa5.97□□□□□ -1.45
DEPDC1B-204ENST00000509006 OXCT2Q9BYC2 517 aaPredicted RBP5.97□□□□□ -1.45
DEPDC1B-204ENST00000509006 LRRC4BQ9NT99 713 aa5.97□□□□□ -1.45
DEPDC1B-204ENST00000509006 THBS1P07996 1170 aa5.96□□□□□ -1.46
DEPDC1B-204ENST00000509006 FURINP09958 794 aa5.96□□□□□ -1.46
DEPDC1B-204ENST00000509006 COL8A1P27658 744 aa5.96□□□□□ -1.46
DEPDC1B-204ENST00000509006 NBPF10Q6P3W6 841 aaKnown RBP5.96□□□□□ -1.46
DEPDC1B-204ENST00000509006 NBPF15Q8N660 670 aa5.96□□□□□ -1.46
DEPDC1B-204ENST00000509006 KRTAP9-2Q9BYQ4 174 aa5.96□□□□□ -1.46
DEPDC1B-204ENST00000509006 NUCKS1Q9H1E3 243 aaKnown RBP5.96□□□□□ -1.46
DEPDC1B-204ENST00000509006 NSFL1CQ9UNZ2 370 aaKnown RBP5.96□□□□□ -1.46
DEPDC1B-204ENST00000509006 ERVK-9P63128 1117 aa5.95□□□□□ -1.46
DEPDC1B-204ENST00000509006 C1orf229Q6ZS94 237 aaPredicted RBP5.95□□□□□ -1.46
DEPDC1B-204ENST00000509006 NLRP3Q96P20 1036 aa5.95□□□□□ -1.46
DEPDC1B-204ENST00000509006 GPBP1L1Q9HC44 474 aaPredicted RBP5.95□□□□□ -1.46
DEPDC1B-204ENST00000509006 PCDHB9Q9Y5E1 797 aa5.95□□□□□ -1.46
DEPDC1B-204ENST00000509006 MAP2K3P46734 347 aa5.94□□□□□ -1.46
DEPDC1B-204ENST00000509006 SCTRP47872 440 aa5.94□□□□□ -1.46
DEPDC1B-204ENST00000509006 CC2D2BQ6DHV5 1058 aa5.94□□□□□ -1.46
DEPDC1B-204ENST00000509006 TRIM34Q9BYJ4 488 aa5.94□□□□□ -1.46
DEPDC1B-204ENST00000509006 FAM117AQ9C073 453 aa5.94□□□□□ -1.46
DEPDC1B-204ENST00000509006 GRIP2Q9C0E4 1043 aa5.94□□□□□ -1.46
DEPDC1B-204ENST00000509006 KDM4CQ9H3R0 1056 aa5.94□□□□□ -1.46
DEPDC1B-204ENST00000509006 ARHGEF10LQ9HCE6 1279 aa5.94□□□□□ -1.46
DEPDC1B-204ENST00000509006 TIMMDC1Q9NPL8 285 aa5.94□□□□□ -1.46
DEPDC1B-204ENST00000509006 KRTAP9-6A0A140TA67 174 aa5.93□□□□□ -1.46
DEPDC1B-204ENST00000509006 SPATA31C2B4DYI2 1134 aa5.93□□□□□ -1.46
DEPDC1B-204ENST00000509006 WASLO00401 505 aaPredicted RBP5.93□□□□□ -1.46
DEPDC1B-204ENST00000509006 F11P03951 625 aa5.93□□□□□ -1.46
DEPDC1B-204ENST00000509006 CLN3Q13286 438 aa5.93□□□□□ -1.46
DEPDC1B-204ENST00000509006 KRTAP1-3Q8IUG1 177 aa5.93□□□□□ -1.46
DEPDC1B-204ENST00000509006 RRAGCQ9HB90 399 aa5.93□□□□□ -1.46
DEPDC1B-204ENST00000509006 GPAMQ9HCL2 828 aa5.93□□□□□ -1.46
DEPDC1B-204ENST00000509006 MKL2Q9ULH7 1088 aa5.93□□□□□ -1.46
DEPDC1B-204ENST00000509006 GRIN2CQ14957 1233 aa5.92□□□□□ -1.46
DEPDC1B-204ENST00000509006 TAS1R3Q7RTX0 852 aa5.92□□□□□ -1.46
DEPDC1B-204ENST00000509006 CYP2U1Q7Z449 544 aa5.92□□□□□ -1.46
DEPDC1B-204ENST00000509006 KLRG1Q96E93 195 aa5.92□□□□□ -1.46
DEPDC1B-204ENST00000509006 SUV39H2Q9H5I1 410 aa5.92□□□□□ -1.46
DEPDC1B-204ENST00000509006 RAB6BQ9NRW1 208 aa5.92□□□□□ -1.46
DEPDC1B-204ENST00000509006 ZBBXA8MT70 800 aa5.91□□□□□ -1.46
DEPDC1B-204ENST00000509006 FBXO45P0C2W1 286 aa5.91□□□□□ -1.46
DEPDC1B-204ENST00000509006 TRIM52Q96A61 297 aa5.91□□□□□ -1.46
DEPDC1B-204ENST00000509006 DDRGK1Q96HY6 314 aa5.91□□□□□ -1.46
DEPDC1B-204ENST00000509006 HOXB4P17483 251 aaPredicted RBP5.9□□□□□ -1.46
DEPDC1B-204ENST00000509006 RFC5P40937 340 aa5.9□□□□□ -1.46
DEPDC1B-204ENST00000509006 PHKA2P46019 1235 aa5.9□□□□□ -1.46
DEPDC1B-204ENST00000509006 WDR44Q5JSH3 913 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms