RNA–Protein interactions for RNA: ENST00000509006.1

DEPDC1B-204, Transcript of DEP domain containing 1B, humanhuman

TSL 4

Gene DEPDC1B, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-204ENST00000509006 AEBP2Q6ZN18 517 aaPredicted RBP19.19■□□□□ 0.66
DEPDC1B-204ENST00000509006 CHIC1Q5VXU3 224 aa17.99■□□□□ 0.47
DEPDC1B-204ENST00000509006 SENP3Q9H4L4 574 aaPredicted RBP16.34■□□□□ 0.21
DEPDC1B-204ENST00000509006 PHF23Q9BUL5 403 aaPredicted RBP16.11■□□□□ 0.17
DEPDC1B-204ENST00000509006 FOXD1Q16676 465 aa15.29■□□□□ 0.04
DEPDC1B-204ENST00000509006 POTEDQ86YR6 584 aa14.75□□□□□ -0.05
DEPDC1B-204ENST00000509006 MSH5O43196 834 aa14.34□□□□□ -0.11
DEPDC1B-204ENST00000509006 PLPPR3Q6T4P5 718 aa14.27□□□□□ -0.13
DEPDC1B-204ENST00000509006 PIAS4Q8N2W9 510 aaPredicted RBP14.25□□□□□ -0.13
DEPDC1B-204ENST00000509006 PPP6R1Q9UPN7 881 aa14.17□□□□□ -0.14
DEPDC1B-204ENST00000509006 ADRA2BP18089 450 aa14.11□□□□□ -0.15
DEPDC1B-204ENST00000509006 MAPK8IP2Q13387 824 aaPredicted RBP13.02□□□□□ -0.33
DEPDC1B-204ENST00000509006 DMRT2Q9Y5R5 561 aa12.94□□□□□ -0.34
DEPDC1B-204ENST00000509006 SCAF1Q9H7N4 1312 aaKnown RBP12.83□□□□□ -0.36
DEPDC1B-204ENST00000509006 PPP4R3CPQ6ZMV5 832 aa12.51□□□□□ -0.41
DEPDC1B-204ENST00000509006 DCAF8L1A6NGE4 600 aa12.45□□□□□ -0.42
DEPDC1B-204ENST00000509006 CACNB1Q02641 598 aaPredicted RBP12.45□□□□□ -0.42
DEPDC1B-204ENST00000509006 HOXD11P31277 338 aaPredicted RBP12.38□□□□□ -0.43
DEPDC1B-204ENST00000509006 CNKSR2Q8WXI2 1034 aa12.29□□□□□ -0.44
DEPDC1B-204ENST00000509006 RNF39Q9H2S5 420 aa12.24□□□□□ -0.45
DEPDC1B-204ENST00000509006 RNF216Q9NWF9 866 aaPredicted RBP12.23□□□□□ -0.45
DEPDC1B-204ENST00000509006 C1QBPQ07021 282 aaKnown RBP12.01□□□□□ -0.49
DEPDC1B-204ENST00000509006 NCBP3Q53F19 620 aaKnown RBP11.93□□□□□ -0.5
DEPDC1B-204ENST00000509006 DNAJC5BQ9UF47 199 aa11.92□□□□□ -0.5
DEPDC1B-204ENST00000509006 NPM3O75607 178 aaKnown RBP11.81□□□□□ -0.52
DEPDC1B-204ENST00000509006 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.8□□□□□ -0.52
DEPDC1B-204ENST00000509006 U3KPZ7 1027 aaPredicted RBP11.56□□□□□ -0.56
DEPDC1B-204ENST00000509006 SPINK5Q9NQ38 1064 aaPredicted RBP11.47□□□□□ -0.57
DEPDC1B-204ENST00000509006 KCNA4P22459 653 aa11.44□□□□□ -0.58
DEPDC1B-204ENST00000509006 POTEHQ6S545 545 aa11.44□□□□□ -0.58
DEPDC1B-204ENST00000509006 CAPN15O75808 1086 aa11.43□□□□□ -0.58
DEPDC1B-204ENST00000509006 DSG3P32926 999 aa11.4□□□□□ -0.58
DEPDC1B-204ENST00000509006 SLC4A2P04920 1241 aa11.34□□□□□ -0.59
DEPDC1B-204ENST00000509006 TRHP20396 242 aaPredicted RBP11.22□□□□□ -0.61
DEPDC1B-204ENST00000509006 ABCB7O75027 752 aa11.19□□□□□ -0.62
DEPDC1B-204ENST00000509006 ZNF219Q9P2Y4 722 aaPredicted RBP11.14□□□□□ -0.63
DEPDC1B-204ENST00000509006 APLP2Q06481 763 aa11.13□□□□□ -0.63
DEPDC1B-204ENST00000509006 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.09□□□□□ -0.63
DEPDC1B-204ENST00000509006 HNRNPUL2Q1KMD3 747 aaKnown RBP11.09□□□□□ -0.63
DEPDC1B-204ENST00000509006 SAMD1Q6SPF0 538 aaPredicted RBP11.04□□□□□ -0.64
DEPDC1B-204ENST00000509006 MYCNP04198 464 aaPredicted RBP10.91□□□□□ -0.66
DEPDC1B-204ENST00000509006 POLA2Q14181 598 aa10.85□□□□□ -0.67
DEPDC1B-204ENST00000509006 RBM42Q9BTD8 480 aaKnown RBP10.85□□□□□ -0.67
DEPDC1B-204ENST00000509006 SLC4A1APQ9BWU0 796 aaKnown RBP10.73□□□□□ -0.69
DEPDC1B-204ENST00000509006 ATF5Q9Y2D1 282 aaPredicted RBP10.73□□□□□ -0.69
DEPDC1B-204ENST00000509006 CHRDL2Q6WN34 429 aa10.72□□□□□ -0.69
DEPDC1B-204ENST00000509006 FOXD4L1Q9NU39 408 aa10.69□□□□□ -0.7
DEPDC1B-204ENST00000509006 AKT1S1Q96B36 256 aa10.57□□□□□ -0.72
DEPDC1B-204ENST00000509006 ZBTB12Q9Y330 459 aaPredicted RBP10.57□□□□□ -0.72
DEPDC1B-204ENST00000509006 OSCARQ8IYS5 282 aa10.55□□□□□ -0.72
DEPDC1B-204ENST00000509006 ZBTB22O15209 634 aa10.53□□□□□ -0.72
DEPDC1B-204ENST00000509006 REM2Q8IYK8 340 aaPredicted RBP10.49□□□□□ -0.73
DEPDC1B-204ENST00000509006 PIP4P2Q8N4L2 257 aa10.44□□□□□ -0.74
DEPDC1B-204ENST00000509006 PITPNM1O00562 1244 aa10.41□□□□□ -0.74
DEPDC1B-204ENST00000509006 SP7Q8TDD2 431 aaPredicted RBP10.41□□□□□ -0.74
DEPDC1B-204ENST00000509006 ATXN8OSP0DMR3 200 aa10.34□□□□□ -0.75
DEPDC1B-204ENST00000509006 FXR2P51116 673 aaKnown RBP eCLIP10.32□□□□□ -0.76
DEPDC1B-204ENST00000509006 HAX1O00165 279 aa10.29□□□□□ -0.76
DEPDC1B-204ENST00000509006 FBLN2P98095 1184 aa10.25□□□□□ -0.77
DEPDC1B-204ENST00000509006 SPDYE2BA6NHP3 402 aa10.24□□□□□ -0.77
DEPDC1B-204ENST00000509006 SPDYE6P0CI01 402 aa10.24□□□□□ -0.77
DEPDC1B-204ENST00000509006 SPDYE2Q495Y8 402 aa10.24□□□□□ -0.77
DEPDC1B-204ENST00000509006 MKRN4PQ13434 485 aaPredicted RBP10.21□□□□□ -0.77
DEPDC1B-204ENST00000509006 EVX2Q03828 476 aa10.18□□□□□ -0.78
DEPDC1B-204ENST00000509006 CLEC11AQ9Y240 323 aa10.15□□□□□ -0.78
DEPDC1B-204ENST00000509006 PRKAR2AP13861 404 aaKnown RBP10.12□□□□□ -0.79
DEPDC1B-204ENST00000509006 SPDYE1Q8NFV5 336 aaPredicted RBP10.12□□□□□ -0.79
DEPDC1B-204ENST00000509006 ZNF692Q9BU19 519 aaPredicted RBP10.11□□□□□ -0.79
DEPDC1B-204ENST00000509006 SSUH2Q9Y2M2 353 aa10.11□□□□□ -0.79
DEPDC1B-204ENST00000509006 C19orf67A6NJJ6 358 aa10□□□□□ -0.81
DEPDC1B-204ENST00000509006 CHADLQ6NUI6 762 aa10□□□□□ -0.81
DEPDC1B-204ENST00000509006 PABPN1Q86U42 306 aaKnown RBP eCLIP9.97□□□□□ -0.81
DEPDC1B-204ENST00000509006 PRR29P0C7W0 189 aa9.92□□□□□ -0.82
DEPDC1B-204ENST00000509006 GABBR2O75899 941 aa9.91□□□□□ -0.82
DEPDC1B-204ENST00000509006 CSRNP3Q8WYN3 585 aa9.84□□□□□ -0.83
DEPDC1B-204ENST00000509006 PLSCR2Q9NRY7 297 aa9.81□□□□□ -0.84
DEPDC1B-204ENST00000509006 CD44P16070 742 aaKnown RBP9.79□□□□□ -0.84
DEPDC1B-204ENST00000509006 FARP1Q9Y4F1 1045 aaPredicted RBP9.79□□□□□ -0.84
DEPDC1B-204ENST00000509006 LHX8Q68G74 356 aa9.76□□□□□ -0.85
DEPDC1B-204ENST00000509006 POTEIP0CG38 1075 aa9.72□□□□□ -0.85
DEPDC1B-204ENST00000509006 CREBZFQ9NS37 354 aa9.66□□□□□ -0.86
DEPDC1B-204ENST00000509006 EHMT2Q96KQ7 1210 aa9.65□□□□□ -0.86
DEPDC1B-204ENST00000509006 ZNF579Q8NAF0 562 aaKnown RBP9.62□□□□□ -0.87
DEPDC1B-204ENST00000509006 ZRANB1Q9UGI0 708 aa9.62□□□□□ -0.87
DEPDC1B-204ENST00000509006 SPDYE4A6NLX3 237 aa9.6□□□□□ -0.87
DEPDC1B-204ENST00000509006 CLCN6P51797 869 aa9.6□□□□□ -0.87
DEPDC1B-204ENST00000509006 DCBLD2Q96PD2 775 aa9.59□□□□□ -0.87
DEPDC1B-204ENST00000509006 STAG3Q9UJ98 1225 aa9.59□□□□□ -0.87
DEPDC1B-204ENST00000509006 GALR2O43603 387 aaPredicted RBP9.55□□□□□ -0.88
DEPDC1B-204ENST00000509006 PHF12Q96QT6 1004 aa9.51□□□□□ -0.89
DEPDC1B-204ENST00000509006 PAK3O75914 559 aaPredicted RBP9.47□□□□□ -0.89
DEPDC1B-204ENST00000509006 MNX1P50219 401 aaPredicted RBP9.47□□□□□ -0.89
DEPDC1B-204ENST00000509006 NPM1P06748 294 aaKnown RBP eCLIP9.42□□□□□ -0.9
DEPDC1B-204ENST00000509006 POTEB2H3BUK9 544 aa9.41□□□□□ -0.9
DEPDC1B-204ENST00000509006 OTUD5Q96G74 571 aa9.39□□□□□ -0.91
DEPDC1B-204ENST00000509006 PELP1Q8IZL8 1130 aaKnown RBP9.38□□□□□ -0.91
DEPDC1B-204ENST00000509006 MS4A3Q96HJ5 214 aa9.36□□□□□ -0.91
DEPDC1B-204ENST00000509006 PROM2Q8N271 834 aa9.33□□□□□ -0.92
DEPDC1B-204ENST00000509006 TSPYL2Q9H2G4 693 aaPredicted RBP9.31□□□□□ -0.92
DEPDC1B-204ENST00000509006 ASTLQ6HA08 431 aaPredicted RBP9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms