RNA–Protein interactions for RNA: ENST00000508297.2

ATP2C1-213, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 4

Gene ATP2C1, Length 540 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-213ENST00000508297 DNMT3AQ9Y6K1 912 aaPredicted RBP5.77□□□□□ -1.49
ATP2C1-213ENST00000508297 ABCC9O60706 1549 aa5.77□□□□□ -1.49
ATP2C1-213ENST00000508297 TLDC2A0PJX2 215 aa5.76□□□□□ -1.49
ATP2C1-213ENST00000508297 C21orf2O43822 256 aa5.76□□□□□ -1.49
ATP2C1-213ENST00000508297 RAB11FIP3O75154 756 aa5.76□□□□□ -1.49
ATP2C1-213ENST00000508297 PROX2Q3B8N5 592 aa5.76□□□□□ -1.49
ATP2C1-213ENST00000508297 ZSCAN29Q8IWY8 852 aaPredicted RBP5.76□□□□□ -1.49
ATP2C1-213ENST00000508297 PLPP7Q8NBV4 271 aa5.76□□□□□ -1.49
ATP2C1-213ENST00000508297 CEP126Q9P2H0 1117 aa5.76□□□□□ -1.49
ATP2C1-213ENST00000508297 GTF2F1P35269 517 aaKnown RBP eCLIP5.75□□□□□ -1.49
ATP2C1-213ENST00000508297 COL19A1Q14993 1142 aa5.75□□□□□ -1.49
ATP2C1-213ENST00000508297 RGL4Q8IZJ4 473 aa5.75□□□□□ -1.49
ATP2C1-213ENST00000508297 LARGE2Q8N3Y3 721 aa5.75□□□□□ -1.49
ATP2C1-213ENST00000508297 MICAL1Q8TDZ2 1067 aa5.75□□□□□ -1.49
ATP2C1-213ENST00000508297 PRKD2Q9BZL6 878 aa5.75□□□□□ -1.49
ATP2C1-213ENST00000508297 CUEDC1Q9NWM3 386 aaPredicted RBP5.75□□□□□ -1.49
ATP2C1-213ENST00000508297 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.75□□□□□ -1.49
ATP2C1-213ENST00000508297 TSR3Q9UJK0 312 aaKnown RBP5.75□□□□□ -1.49
ATP2C1-213ENST00000508297 NBPF26B4DH59 902 aa5.74□□□□□ -1.49
ATP2C1-213ENST00000508297 ZBTB7BO15156 539 aaPredicted RBP5.74□□□□□ -1.49
ATP2C1-213ENST00000508297 TNNI2P48788 182 aa5.74□□□□□ -1.49
ATP2C1-213ENST00000508297 FUT2Q10981 343 aa5.74□□□□□ -1.49
ATP2C1-213ENST00000508297 SLFNL1Q499Z3 407 aa5.74□□□□□ -1.49
ATP2C1-213ENST00000508297 EGFLAMQ63HQ2 1017 aa5.74□□□□□ -1.49
ATP2C1-213ENST00000508297 NLGN1Q8N2Q7 840 aa5.74□□□□□ -1.49
ATP2C1-213ENST00000508297 TMEM87AQ8NBN3 555 aa5.74□□□□□ -1.49
ATP2C1-213ENST00000508297 LRCH3Q96II8 777 aa5.74□□□□□ -1.49
ATP2C1-213ENST00000508297 MKNK1Q9BUB5 465 aa5.74□□□□□ -1.49
ATP2C1-213ENST00000508297 CAPN10Q9HC96 672 aa5.74□□□□□ -1.49
ATP2C1-213ENST00000508297 DNAAF2Q9NVR5 837 aaKnown RBP5.74□□□□□ -1.49
ATP2C1-213ENST00000508297 KIAA1468Q9P260 1216 aa5.74□□□□□ -1.49
ATP2C1-213ENST00000508297 TMA7Q9Y2S6 64 aaKnown RBP5.74□□□□□ -1.49
ATP2C1-213ENST00000508297 NISCHQ9Y2I1 1504 aa5.74□□□□□ -1.49
ATP2C1-213ENST00000508297 SDE2Q6IQ49 451 aa5.73□□□□□ -1.49
ATP2C1-213ENST00000508297 RNF135Q8IUD6 432 aa5.73□□□□□ -1.49
ATP2C1-213ENST00000508297 SLC43A3Q8NBI5 491 aa5.73□□□□□ -1.49
ATP2C1-213ENST00000508297 VTI1AQ96AJ9 217 aa5.73□□□□□ -1.49
ATP2C1-213ENST00000508297 ACBD3Q9H3P7 528 aa5.73□□□□□ -1.49
ATP2C1-213ENST00000508297 HPS5Q9UPZ3 1129 aa5.73□□□□□ -1.49
ATP2C1-213ENST00000508297 TBX22Q9Y458 520 aa5.73□□□□□ -1.49
ATP2C1-213ENST00000508297 V9GY48 417 aaPredicted RBP5.73□□□□□ -1.49
ATP2C1-213ENST00000508297 SFI1A8K8P3 1242 aa5.72□□□□□ -1.49
ATP2C1-213ENST00000508297 TRIM6-TRIM34B2RNG4 842 aa5.72□□□□□ -1.49
ATP2C1-213ENST00000508297 LCE2BO14633 110 aa5.72□□□□□ -1.49
ATP2C1-213ENST00000508297 FMNL1O95466 1100 aaPredicted RBP5.72□□□□□ -1.49
ATP2C1-213ENST00000508297 ATP2B1P20020 1258 aa5.72□□□□□ -1.49
ATP2C1-213ENST00000508297 FANCCQ00597 558 aa5.72□□□□□ -1.49
ATP2C1-213ENST00000508297 FKBP4Q02790 459 aaKnown RBP eCLIP5.72□□□□□ -1.49
ATP2C1-213ENST00000508297 FAM98CQ17RN3 349 aaKnown RBP5.72□□□□□ -1.49
ATP2C1-213ENST00000508297 TMC7Q7Z402 723 aa5.72□□□□□ -1.49
ATP2C1-213ENST00000508297 GAS2L2Q8NHY3 880 aa5.72□□□□□ -1.49
ATP2C1-213ENST00000508297 PMFBP1Q8TBY8 1022 aa5.72□□□□□ -1.49
ATP2C1-213ENST00000508297 ZNF592Q92610 1267 aa5.72□□□□□ -1.49
ATP2C1-213ENST00000508297 SPACA7Q96KW9 195 aa5.72□□□□□ -1.49
ATP2C1-213ENST00000508297 PURBQ96QR8 312 aaKnown RBP5.72□□□□□ -1.49
ATP2C1-213ENST00000508297 SLC52A1Q9NWF4 448 aa5.72□□□□□ -1.49
ATP2C1-213ENST00000508297 FKBPLQ9UIM3 349 aa5.72□□□□□ -1.49
ATP2C1-213ENST00000508297 CHIC2Q9UKJ5 165 aa5.72□□□□□ -1.49
ATP2C1-213ENST00000508297 EML3Q32P44 896 aa5.71□□□□□ -1.5
ATP2C1-213ENST00000508297 SWT1Q5T5J6 900 aaKnown RBP5.71□□□□□ -1.5
ATP2C1-213ENST00000508297 TMED8Q6PL24 325 aaPredicted RBP5.71□□□□□ -1.5
ATP2C1-213ENST00000508297 LYPD8Q6UX82 237 aa5.71□□□□□ -1.5
ATP2C1-213ENST00000508297 SIX5Q8N196 739 aa5.71□□□□□ -1.5
ATP2C1-213ENST00000508297 OCSTAMPQ9BR26 566 aa5.71□□□□□ -1.5
ATP2C1-213ENST00000508297 TGIF2Q9GZN2 237 aa5.71□□□□□ -1.5
ATP2C1-213ENST00000508297 PARP2Q9UGN5 583 aa5.71□□□□□ -1.5
ATP2C1-213ENST00000508297 SEPT9Q9UHD8 586 aaPredicted RBP5.71□□□□□ -1.5
ATP2C1-213ENST00000508297 SEC13P55735 322 aa5.7□□□□□ -1.5
ATP2C1-213ENST00000508297 PPP4CP60510 307 aa5.7□□□□□ -1.5
ATP2C1-213ENST00000508297 TCEAL1Q15170 157 aa5.7□□□□□ -1.5
ATP2C1-213ENST00000508297 PACS2Q86VP3 889 aa5.7□□□□□ -1.5
ATP2C1-213ENST00000508297 ZNF775Q96BV0 537 aaPredicted RBP5.7□□□□□ -1.5
ATP2C1-213ENST00000508297 PDZRN3Q9UPQ7 1066 aa5.7□□□□□ -1.5
ATP2C1-213ENST00000508297 SUGT1Q9Y2Z0 365 aa5.7□□□□□ -1.5
ATP2C1-213ENST00000508297 PPME1Q9Y570 386 aa5.7□□□□□ -1.5
ATP2C1-213ENST00000508297 DNAJA1P31689 397 aaKnown RBP5.69□□□□□ -1.5
ATP2C1-213ENST00000508297 FMR1Q06787 632 aaKnown RBP eCLIP5.69□□□□□ -1.5
ATP2C1-213ENST00000508297 FKBP5Q13451 457 aaPredicted RBP5.69□□□□□ -1.5
ATP2C1-213ENST00000508297 RETREG3Q86VR2 466 aa5.69□□□□□ -1.5
ATP2C1-213ENST00000508297 RNF34Q969K3 372 aa5.69□□□□□ -1.5
ATP2C1-213ENST00000508297 SETDB2Q96T68 719 aa5.69□□□□□ -1.5
ATP2C1-213ENST00000508297 DUSP9Q99956 384 aaKnown RBP5.69□□□□□ -1.5
ATP2C1-213ENST00000508297 ZSWIM4Q9H7M6 989 aa5.69□□□□□ -1.5
ATP2C1-213ENST00000508297 CCSER2Q9H7U1 834 aa5.69□□□□□ -1.5
ATP2C1-213ENST00000508297 MAP10Q9P2G4 905 aa5.69□□□□□ -1.5
ATP2C1-213ENST00000508297 KLHL42Q9P2K6 505 aa5.69□□□□□ -1.5
ATP2C1-213ENST00000508297 WWC3Q9ULE0 1092 aa5.69□□□□□ -1.5
ATP2C1-213ENST00000508297 TREHO43280 583 aa5.68□□□□□ -1.5
ATP2C1-213ENST00000508297 F12P00748 615 aaPredicted RBP5.68□□□□□ -1.5
ATP2C1-213ENST00000508297 ATP1A2P50993 1020 aa5.68□□□□□ -1.5
ATP2C1-213ENST00000508297 RBL2Q08999 1139 aa5.68□□□□□ -1.5
ATP2C1-213ENST00000508297 SF3B2Q13435 895 aaKnown RBP5.68□□□□□ -1.5
ATP2C1-213ENST00000508297 PTPROQ16827 1216 aa5.68□□□□□ -1.5
ATP2C1-213ENST00000508297 CCDC102BQ68D86 513 aa5.68□□□□□ -1.5
ATP2C1-213ENST00000508297 DESI1Q6ICB0 168 aa5.68□□□□□ -1.5
ATP2C1-213ENST00000508297 PPP1R18Q6NYC8 613 aa5.68□□□□□ -1.5
ATP2C1-213ENST00000508297 JAZF1Q86VZ6 243 aa5.68□□□□□ -1.5
ATP2C1-213ENST00000508297 TRIM50Q86XT4 487 aa5.68□□□□□ -1.5
ATP2C1-213ENST00000508297 ZNF526Q8TF50 670 aaPredicted RBP5.68□□□□□ -1.5
ATP2C1-213ENST00000508297 GMLQ99445 158 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms