RNA–Protein interactions for RNA: ENST00000507485.1

RPS3A-206, Transcript of ribosomal protein S3A, humanhuman

TSL 1 (best)

Gene RPS3A, Length 1,526 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3A-206ENST00000507485 L3MBTL2Q969R5 705 aa13.05□□□□□ -0.32
RPS3A-206ENST00000507485 TRPM1Q7Z4N2 1603 aa13.05□□□□□ -0.32
RPS3A-206ENST00000507485 COL5A2P05997 1499 aaPredicted RBP13.04□□□□□ -0.32
RPS3A-206ENST00000507485 GCP02774 474 aa13.04□□□□□ -0.32
RPS3A-206ENST00000507485 BARGINQ6ZT62 677 aa13.04□□□□□ -0.32
RPS3A-206ENST00000507485 KRTAP3-3Q9BYR6 98 aa13.04□□□□□ -0.32
RPS3A-206ENST00000507485 KRTAP3-2Q9BYR7 98 aa13.04□□□□□ -0.32
RPS3A-206ENST00000507485 PIK3C2AO00443 1686 aa13.04□□□□□ -0.32
RPS3A-206ENST00000507485 RREB1Q92766 1687 aa13.04□□□□□ -0.32
RPS3A-206ENST00000507485 USP6P35125 1406 aa13.04□□□□□ -0.32
RPS3A-206ENST00000507485 SLIT3O75094 1523 aa13.04□□□□□ -0.32
RPS3A-206ENST00000507485 SPOCK2Q92563 424 aa13.03□□□□□ -0.32
RPS3A-206ENST00000507485 SIN3AQ96ST3 1273 aa13.03□□□□□ -0.32
RPS3A-206ENST00000507485 CABP1Q9NZU7 370 aa13.03□□□□□ -0.32
RPS3A-206ENST00000507485 CIZ1Q9ULV3 898 aaPredicted RBP13.03□□□□□ -0.32
RPS3A-206ENST00000507485 COL18A1P39060 1754 aa13.03□□□□□ -0.32
RPS3A-206ENST00000507485 NUP188Q5SRE5 1749 aa13.03□□□□□ -0.32
RPS3A-206ENST00000507485 PARP4Q9UKK3 1724 aaKnown RBP13.03□□□□□ -0.32
RPS3A-206ENST00000507485 POTEB3A0JP26 581 aa13.03□□□□□ -0.32
RPS3A-206ENST00000507485 POTEBQ6S5H4 581 aa13.03□□□□□ -0.32
RPS3A-206ENST00000507485 FAM196AQ6ZSG2 479 aa13.03□□□□□ -0.32
RPS3A-206ENST00000507485 EVA1CP58658 441 aa13.02□□□□□ -0.33
RPS3A-206ENST00000507485 PEAK1Q9H792 1746 aa13.01□□□□□ -0.33
RPS3A-206ENST00000507485 APBA3O96018 575 aa13.01□□□□□ -0.33
RPS3A-206ENST00000507485 NLRP13Q86W25 1043 aa13.01□□□□□ -0.33
RPS3A-206ENST00000507485 TCP11L2Q8N4U5 519 aa13.01□□□□□ -0.33
RPS3A-206ENST00000507485 LRRC37A3O60309 1634 aa13□□□□□ -0.33
RPS3A-206ENST00000507485 AXIN2Q9Y2T1 843 aa12.99□□□□□ -0.33
RPS3A-206ENST00000507485 BOLA1Q9Y3E2 137 aa12.99□□□□□ -0.33
RPS3A-206ENST00000507485 AKAP12Q02952 1782 aa12.99□□□□□ -0.33
RPS3A-206ENST00000507485 CRB1P82279 1406 aa12.99□□□□□ -0.33
RPS3A-206ENST00000507485 WNK3Q9BYP7 1800 aa12.98□□□□□ -0.33
RPS3A-206ENST00000507485 ZBTB7CA1YPR0 619 aa12.98□□□□□ -0.33
RPS3A-206ENST00000507485 NLRP6P59044 892 aa12.98□□□□□ -0.33
RPS3A-206ENST00000507485 PDE3BQ13370 1112 aa12.98□□□□□ -0.33
RPS3A-206ENST00000507485 DPY19L2Q6NUT2 758 aa12.98□□□□□ -0.33
RPS3A-206ENST00000507485 PTF1AQ7RTS3 328 aa12.98□□□□□ -0.33
RPS3A-206ENST00000507485 RGPD5Q99666 1765 aa12.98□□□□□ -0.33
RPS3A-206ENST00000507485 BRD4O60885 1362 aaPredicted RBP12.98□□□□□ -0.33
RPS3A-206ENST00000507485 AATKQ6ZMQ8 1374 aa12.98□□□□□ -0.33
RPS3A-206ENST00000507485 SBF2Q86WG5 1849 aa12.97□□□□□ -0.33
RPS3A-206ENST00000507485 THRAP3Q9Y2W1 955 aaKnown RBP12.97□□□□□ -0.33
RPS3A-206ENST00000507485 CPSF1Q10570 1443 aaKnown RBP12.96□□□□□ -0.34
RPS3A-206ENST00000507485 PARD3Q8TEW0 1356 aa12.95□□□□□ -0.34
RPS3A-206ENST00000507485 TTC21BQ7Z4L5 1316 aa12.95□□□□□ -0.34
RPS3A-206ENST00000507485 EVC2Q86UK5 1308 aa12.95□□□□□ -0.34
RPS3A-206ENST00000507485 NFAT5O94916 1531 aa12.95□□□□□ -0.34
RPS3A-206ENST00000507485 HOXB3P14651 431 aaPredicted RBP12.95□□□□□ -0.34
RPS3A-206ENST00000507485 NEUROD1Q13562 356 aa12.95□□□□□ -0.34
RPS3A-206ENST00000507485 ARHGEF25Q86VW2 580 aa12.94□□□□□ -0.34
RPS3A-206ENST00000507485 ROCK2O75116 1388 aaKnown RBP12.94□□□□□ -0.34
RPS3A-206ENST00000507485 OVOS2A0A0G2JMS6 1433 aa12.93□□□□□ -0.34
RPS3A-206ENST00000507485 OVOS2A0A0J9YW53 1432 aa12.93□□□□□ -0.34
RPS3A-206ENST00000507485 OVOS2Q6IE36 1432 aa12.93□□□□□ -0.34
RPS3A-206ENST00000507485 MON2Q7Z3U7 1717 aa12.93□□□□□ -0.34
RPS3A-206ENST00000507485 IFNLR1Q8IU57 520 aaPredicted RBP12.93□□□□□ -0.34
RPS3A-206ENST00000507485 CD163L1Q9NR16 1453 aa12.93□□□□□ -0.34
RPS3A-206ENST00000507485 WDR17Q8IZU2 1322 aa12.93□□□□□ -0.34
RPS3A-206ENST00000507485 SOX12O15370 315 aa12.93□□□□□ -0.34
RPS3A-206ENST00000507485 HOXB1P14653 301 aaPredicted RBP12.93□□□□□ -0.34
RPS3A-206ENST00000507485 ZNF710Q8N1W2 664 aa12.93□□□□□ -0.34
RPS3A-206ENST00000507485 MARCH10Q8NA82 808 aaPredicted RBP12.93□□□□□ -0.34
RPS3A-206ENST00000507485 TOM1L2Q6ZVM7 507 aa12.92□□□□□ -0.34
RPS3A-206ENST00000507485 ANO8Q9HCE9 1232 aaPredicted RBP12.92□□□□□ -0.34
RPS3A-206ENST00000507485 RGPD3A6NKT7 1758 aaPredicted RBP12.91□□□□□ -0.34
RPS3A-206ENST00000507485 RGPD4Q7Z3J3 1758 aa12.91□□□□□ -0.34
RPS3A-206ENST00000507485 DOK7Q18PE1 504 aa12.91□□□□□ -0.34
RPS3A-206ENST00000507485 DDB1Q16531 1140 aa12.9□□□□□ -0.34
RPS3A-206ENST00000507485 KTN1Q86UP2 1357 aaKnown RBP12.9□□□□□ -0.34
RPS3A-206ENST00000507485 USP54Q70EL1 1684 aa12.9□□□□□ -0.34
RPS3A-206ENST00000507485 PDGFDQ9GZP0 370 aaPredicted RBP12.89□□□□□ -0.35
RPS3A-206ENST00000507485 TTC21AQ8NDW8 1320 aa12.89□□□□□ -0.35
RPS3A-206ENST00000507485 CASZ1Q86V15 1759 aa12.89□□□□□ -0.35
RPS3A-206ENST00000507485 SBNO2Q9Y2G9 1366 aa12.88□□□□□ -0.35
RPS3A-206ENST00000507485 PLSCR1O15162 318 aa12.88□□□□□ -0.35
RPS3A-206ENST00000507485 NME9Q86XW9 330 aa12.88□□□□□ -0.35
RPS3A-206ENST00000507485 CARD10Q9BWT7 1032 aa12.88□□□□□ -0.35
RPS3A-206ENST00000507485 BCL9O00512 1426 aa12.87□□□□□ -0.35
RPS3A-206ENST00000507485 USP31Q70CQ4 1352 aa12.87□□□□□ -0.35
RPS3A-206ENST00000507485 NBPF14Q5TI25 921 aa12.87□□□□□ -0.35
RPS3A-206ENST00000507485 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.87□□□□□ -0.35
RPS3A-206ENST00000507485 KCNH5Q8NCM2 988 aa12.87□□□□□ -0.35
RPS3A-206ENST00000507485 BCL11BQ9C0K0 894 aaPredicted RBP12.87□□□□□ -0.35
RPS3A-206ENST00000507485 LTN1O94822 1766 aa12.86□□□□□ -0.35
RPS3A-206ENST00000507485 ABCC6O95255 1503 aa12.86□□□□□ -0.35
RPS3A-206ENST00000507485 RIMBP2O15034 1052 aa12.85□□□□□ -0.35
RPS3A-206ENST00000507485 KCNQ2O43526 872 aa12.85□□□□□ -0.35
RPS3A-206ENST00000507485 CSB-PGBD3P0DP91 1061 aa12.85□□□□□ -0.35
RPS3A-206ENST00000507485 SLC12A5Q9H2X9 1139 aa12.85□□□□□ -0.35
RPS3A-206ENST00000507485 ERBB3P21860 1342 aa12.85□□□□□ -0.35
RPS3A-206ENST00000507485 TNS2Q63HR2 1409 aa12.84□□□□□ -0.35
RPS3A-206ENST00000507485 CARD11Q9BXL7 1154 aa12.84□□□□□ -0.35
RPS3A-206ENST00000507485 C11orf95C9JLR9 678 aaPredicted RBP12.83□□□□□ -0.35
RPS3A-206ENST00000507485 CDCA7Q9BWT1 371 aaPredicted RBP12.83□□□□□ -0.35
RPS3A-206ENST00000507485 NHSQ6T4R5 1651 aa12.83□□□□□ -0.36
RPS3A-206ENST00000507485 SPON1Q9HCB6 807 aa12.83□□□□□ -0.36
RPS3A-206ENST00000507485 A0A1W2PP64 1363 aa12.82□□□□□ -0.36
RPS3A-206ENST00000507485 CCDC7Q96M83 1385 aa12.82□□□□□ -0.36
RPS3A-206ENST00000507485 MYOM1P52179 1685 aa12.82□□□□□ -0.36
RPS3A-206ENST00000507485 EXOC5O00471 708 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms