RNA–Protein interactions for RNA: ENST00000506652.5

PRKAA1-206, Transcript of protein kinase AMP-activated catalytic subunit alpha 1, human

TSL 5

Gene PRKAA1, Length 1,082 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKAA1-206	ENST00000506652	HSP90AB2P	Q58FF8	381 aa		11.28	□□□□□ -0.6
PRKAA1-206	ENST00000506652	BARGIN	Q6ZT62	677 aa		11.28	□□□□□ -0.6
PRKAA1-206	ENST00000506652	SP7	Q8TDD2	431 aa	Predicted RBP	11.28	□□□□□ -0.6
PRKAA1-206	ENST00000506652	PARP4	Q9UKK3	1724 aa	Known RBP	11.28	□□□□□ -0.6
PRKAA1-206	ENST00000506652	ILDR2	Q71H61	639 aa		11.27	□□□□□ -0.61
PRKAA1-206	ENST00000506652	SEPT12	Q8IYM1	358 aa		11.27	□□□□□ -0.61
PRKAA1-206	ENST00000506652	CDCA7	Q9BWT1	371 aa	Predicted RBP	11.27	□□□□□ -0.61
PRKAA1-206	ENST00000506652	ONECUT3	O60422	494 aa	Predicted RBP	11.26	□□□□□ -0.61
PRKAA1-206	ENST00000506652	MTHFS	P49914	203 aa		11.26	□□□□□ -0.61
PRKAA1-206	ENST00000506652	CFAP53	Q96M91	514 aa		11.26	□□□□□ -0.61
PRKAA1-206	ENST00000506652	PARD3	Q8TEW0	1356 aa		11.26	□□□□□ -0.61
PRKAA1-206	ENST00000506652	LRRC37A3	O60309	1634 aa		11.25	□□□□□ -0.61
PRKAA1-206	ENST00000506652	RALBP1	Q15311	655 aa		11.25	□□□□□ -0.61
PRKAA1-206	ENST00000506652	IL2RB	P14784	551 aa		11.24	□□□□□ -0.61
PRKAA1-206	ENST00000506652	EIF4A2	Q14240	407 aa	Known RBP	11.24	□□□□□ -0.61
PRKAA1-206	ENST00000506652	DISP2	A7MBM2	1401 aa		11.24	□□□□□ -0.61
PRKAA1-206	ENST00000506652	HAX1	O00165	279 aa		11.23	□□□□□ -0.61
PRKAA1-206	ENST00000506652	PPP2R1A	P30153	589 aa		11.23	□□□□□ -0.61
PRKAA1-206	ENST00000506652	PDE3B	Q13370	1112 aa		11.23	□□□□□ -0.61
PRKAA1-206	ENST00000506652	DDB1	Q16531	1140 aa		11.23	□□□□□ -0.61
PRKAA1-206	ENST00000506652	NBPF6	Q5VWK0	638 aa		11.23	□□□□□ -0.61
PRKAA1-206	ENST00000506652	KRT27	Q7Z3Y8	459 aa		11.23	□□□□□ -0.61
PRKAA1-206	ENST00000506652	RAPGEF4	Q8WZA2	1011 aa		11.23	□□□□□ -0.61
PRKAA1-206	ENST00000506652	NBPF4	Q96M43	638 aa		11.23	□□□□□ -0.61
PRKAA1-206	ENST00000506652	DIAPH1	O60610	1272 aa	Known RBP	11.22	□□□□□ -0.61
PRKAA1-206	ENST00000506652	TNS2	Q63HR2	1409 aa		11.22	□□□□□ -0.61
PRKAA1-206	ENST00000506652	USHBP1	Q8N6Y0	703 aa		11.22	□□□□□ -0.61
PRKAA1-206	ENST00000506652	SSUH2	Q9Y2M2	353 aa		11.22	□□□□□ -0.61
PRKAA1-206	ENST00000506652	RGPD1	P0DJD0	1748 aa		11.21	□□□□□ -0.61
PRKAA1-206	ENST00000506652	NCAPD2	Q15021	1401 aa		11.21	□□□□□ -0.61
PRKAA1-206	ENST00000506652	MYBBP1A	Q9BQG0	1328 aa	Known RBP	11.21	□□□□□ -0.61
PRKAA1-206	ENST00000506652	EXOC5	O00471	708 aa		11.21	□□□□□ -0.61
PRKAA1-206	ENST00000506652	TAT	P17735	454 aa	Predicted RBP	11.21	□□□□□ -0.61
PRKAA1-206	ENST00000506652	SPDYE1	Q8NFV5	336 aa	Predicted RBP	11.21	□□□□□ -0.61
PRKAA1-206	ENST00000506652	EYA1	Q99502	592 aa		11.21	□□□□□ -0.61
PRKAA1-206	ENST00000506652	COL3A1	P02461	1466 aa	Predicted RBP	11.2	□□□□□ -0.62
PRKAA1-206	ENST00000506652	IGSF1	Q8N6C5	1336 aa		11.2	□□□□□ -0.62
PRKAA1-206	ENST00000506652	NUDC	Q9Y266	331 aa		11.2	□□□□□ -0.62
PRKAA1-206	ENST00000506652	MEGF6	O75095	1541 aa		11.19	□□□□□ -0.62
PRKAA1-206	ENST00000506652	OVOS2	A0A0G2JMS6	1433 aa		11.19	□□□□□ -0.62
PRKAA1-206	ENST00000506652	PKD1L3	Q7Z443	1732 aa		11.19	□□□□□ -0.62
PRKAA1-206	ENST00000506652	ANP32C	O43423	234 aa		11.19	□□□□□ -0.62
PRKAA1-206	ENST00000506652	IL13	P35225	146 aa		11.19	□□□□□ -0.62
PRKAA1-206	ENST00000506652	PRKRIP1	Q9H875	184 aa	Predicted RBP	11.19	□□□□□ -0.62
PRKAA1-206	ENST00000506652	CLEC11A	Q9Y240	323 aa		11.19	□□□□□ -0.62
PRKAA1-206	ENST00000506652	PLEKHG2	Q9H7P9	1386 aa		11.18	□□□□□ -0.62
PRKAA1-206	ENST00000506652	U2SURP	O15042	1029 aa	Known RBP	11.18	□□□□□ -0.62
PRKAA1-206	ENST00000506652	ZCRB1	Q8TBF4	217 aa	Known RBP	11.18	□□□□□ -0.62
PRKAA1-206	ENST00000506652	SHANK3	Q9BYB0	1731 aa		11.18	□□□□□ -0.62
PRKAA1-206	ENST00000506652	SULT6B1	Q6IMI4	303 aa		11.17	□□□□□ -0.62
PRKAA1-206	ENST00000506652	FAM196A	Q6ZSG2	479 aa		11.17	□□□□□ -0.62
PRKAA1-206	ENST00000506652	PCDH11X	Q9BZA7	1347 aa		11.16	□□□□□ -0.62
PRKAA1-206	ENST00000506652	PCDH11Y	Q9BZA8	1340 aa		11.16	□□□□□ -0.62
PRKAA1-206	ENST00000506652	SOCS7	O14512	581 aa		11.16	□□□□□ -0.62
PRKAA1-206	ENST00000506652	SPG7	Q9UQ90	795 aa		11.16	□□□□□ -0.62
PRKAA1-206	ENST00000506652	KDR	P35968	1356 aa		11.16	□□□□□ -0.62
PRKAA1-206	ENST00000506652	SBF2	Q86WG5	1849 aa		11.15	□□□□□ -0.62
PRKAA1-206	ENST00000506652	SF3B2	Q13435	895 aa	Known RBP	11.15	□□□□□ -0.62
PRKAA1-206	ENST00000506652	FAM182B	Q5T319	152 aa		11.15	□□□□□ -0.62
PRKAA1-206	ENST00000506652	DDX54	Q8TDD1	881 aa	Known RBP	11.15	□□□□□ -0.62
PRKAA1-206	ENST00000506652	KAT6B	Q8WYB5	2073 aa		11.15	□□□□□ -0.63
PRKAA1-206	ENST00000506652	HMOX1	P09601	288 aa		11.14	□□□□□ -0.63
PRKAA1-206	ENST00000506652	U2AF1L5	P0DN76	240 aa	Predicted RBP	11.14	□□□□□ -0.63
PRKAA1-206	ENST00000506652	U2AF1	Q01081	240 aa	Known RBP eCLIP	11.14	□□□□□ -0.63
PRKAA1-206	ENST00000506652	AMOT	Q4VCS5	1084 aa		11.14	□□□□□ -0.63
PRKAA1-206	ENST00000506652	PLEKHO1	Q53GL0	409 aa	Predicted RBP	11.14	□□□□□ -0.63
PRKAA1-206	ENST00000506652	AEBP1	Q8IUX7	1158 aa		11.14	□□□□□ -0.63
PRKAA1-206	ENST00000506652	MARCH10	Q8NA82	808 aa	Predicted RBP	11.14	□□□□□ -0.63
PRKAA1-206	ENST00000506652	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	11.14	□□□□□ -0.63	7e-7	■■■■□ 19.8
PRKAA1-206	ENST00000506652	DOT1L	Q8TEK3	1739 aa		11.14	□□□□□ -0.63
PRKAA1-206	ENST00000506652	NHS	Q6T4R5	1651 aa		11.14	□□□□□ -0.63
PRKAA1-206	ENST00000506652	BCL9	O00512	1426 aa		11.13	□□□□□ -0.63
PRKAA1-206	ENST00000506652	NEFM	P07197	916 aa		11.13	□□□□□ -0.63
PRKAA1-206	ENST00000506652	CCDC125	Q86Z20	511 aa		11.13	□□□□□ -0.63
PRKAA1-206	ENST00000506652	TNS1	Q9HBL0	1735 aa	Known RBP	11.12	□□□□□ -0.63
PRKAA1-206	ENST00000506652	WDR43	Q15061	677 aa	Known RBP eCLIP	11.12	□□□□□ -0.63
PRKAA1-206	ENST00000506652	UPF1	Q92900	1129 aa	Known RBP eCLIP	11.12	□□□□□ -0.63
PRKAA1-206	ENST00000506652	TRIM37	O94972	964 aa		11.11	□□□□□ -0.63
PRKAA1-206	ENST00000506652	HSP90AB1	P08238	724 aa	Known RBP	11.11	□□□□□ -0.63
PRKAA1-206	ENST00000506652	PRKAR2A	P13861	404 aa	Known RBP	11.11	□□□□□ -0.63
PRKAA1-206	ENST00000506652	C1orf141	Q5JVX7	400 aa		11.11	□□□□□ -0.63
PRKAA1-206	ENST00000506652	ZNF530	Q6P9A1	599 aa	Predicted RBP	11.11	□□□□□ -0.63
PRKAA1-206	ENST00000506652	IFNL2	Q8IZJ0	200 aa		11.11	□□□□□ -0.63
PRKAA1-206	ENST00000506652	PNN	Q9H307	717 aa	Known RBP	11.11	□□□□□ -0.63
PRKAA1-206	ENST00000506652	FCHSD2	O94868	740 aa		11.1	□□□□□ -0.63
PRKAA1-206	ENST00000506652	PRKAR2B	P31323	418 aa		11.1	□□□□□ -0.63
PRKAA1-206	ENST00000506652	VIRMA	Q69YN4	1812 aa	Known RBP	11.09	□□□□□ -0.63
PRKAA1-206	ENST00000506652	CYP27B1	O15528	508 aa		11.09	□□□□□ -0.63
PRKAA1-206	ENST00000506652	PHKG2	P15735	406 aa		11.09	□□□□□ -0.63
PRKAA1-206	ENST00000506652	BAG6	P46379	1132 aa		11.09	□□□□□ -0.63
PRKAA1-206	ENST00000506652	ACSBG1	Q96GR2	724 aa		11.09	□□□□□ -0.63
PRKAA1-206	ENST00000506652	RSPH6A	Q9H0K4	717 aa		11.09	□□□□□ -0.63
PRKAA1-206	ENST00000506652	BTAF1	O14981	1849 aa		11.09	□□□□□ -0.63
PRKAA1-206	ENST00000506652	ITGB4	P16144	1822 aa		11.09	□□□□□ -0.63
PRKAA1-206	ENST00000506652	MAPK8IP3	Q9UPT6	1336 aa		11.09	□□□□□ -0.63
PRKAA1-206	ENST00000506652	AKAP4	Q5JQC9	854 aa		11.08	□□□□□ -0.64
PRKAA1-206	ENST00000506652	GAS2L2	Q8NHY3	880 aa		11.08	□□□□□ -0.64
PRKAA1-206	ENST00000506652	SYTL4	Q96C24	671 aa	Predicted RBP	11.08	□□□□□ -0.64
PRKAA1-206	ENST00000506652	BCL11B	Q9C0K0	894 aa	Predicted RBP	11.08	□□□□□ -0.64
PRKAA1-206	ENST00000506652	TOGARAM1	Q9Y4F4	1720 aa		11.08	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms