RNA–Protein interactions for RNA: ENST00000504669.5

ITGA1-203, Transcript of integrin subunit alpha 1, humanhuman

TSL 1 (best)

Gene ITGA1, Length 6,276 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA1-203ENST00000504669 GBP7Q8N8V2 638 aaPredicted RBP12.11□□□□□ -0.47
ITGA1-203ENST00000504669 SMIM24O75264 130 aa12.1□□□□□ -0.47
ITGA1-203ENST00000504669 GBP5Q96PP8 586 aa12.1□□□□□ -0.47
ITGA1-203ENST00000504669 SLC24A3Q9HC58 644 aa12.1□□□□□ -0.47
ITGA1-203ENST00000504669 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.1□□□□□ -0.47
ITGA1-203ENST00000504669 MAGEC2Q9UBF1 373 aaPredicted RBP12.1□□□□□ -0.47
ITGA1-203ENST00000504669 SPAG9O60271 1321 aaKnown RBP12.1□□□□□ -0.47
ITGA1-203ENST00000504669 DIXDC1Q155Q3 683 aa12.1□□□□□ -0.47
ITGA1-203ENST00000504669 SH3GL3Q99963 347 aa12.1□□□□□ -0.47
ITGA1-203ENST00000504669 SMTNL1A8MU46 457 aa12.1□□□□□ -0.47
ITGA1-203ENST00000504669 DESP17661 470 aa12.1□□□□□ -0.47
ITGA1-203ENST00000504669 UBE4AQ14139 1066 aa12.1□□□□□ -0.47
ITGA1-203ENST00000504669 MAP7Q14244 749 aa12.1□□□□□ -0.47
ITGA1-203ENST00000504669 PANK2Q9BZ23 570 aa12.1□□□□□ -0.47
ITGA1-203ENST00000504669 FAM177BA6PVY3 158 aa12.1□□□□□ -0.47
ITGA1-203ENST00000504669 SATB1Q01826 763 aa12.1□□□□□ -0.47
ITGA1-203ENST00000504669 HS1BP3Q53T59 392 aa12.1□□□□□ -0.47
ITGA1-203ENST00000504669 FIBPO43427 364 aa12.09□□□□□ -0.47
ITGA1-203ENST00000504669 CHMP2AO43633 222 aa12.09□□□□□ -0.47
ITGA1-203ENST00000504669 OPA1O60313 960 aa12.09□□□□□ -0.47
ITGA1-203ENST00000504669 NPM1P06748 294 aaKnown RBP eCLIP12.09□□□□□ -0.47
ITGA1-203ENST00000504669 UVSSAQ2YD98 709 aa12.09□□□□□ -0.47
ITGA1-203ENST00000504669 MAATS1Q7Z4T9 603 aa12.09□□□□□ -0.47
ITGA1-203ENST00000504669 CDC45O75419 566 aa12.09□□□□□ -0.47
ITGA1-203ENST00000504669 VIMP08670 466 aaKnown RBP12.09□□□□□ -0.47
ITGA1-203ENST00000504669 DYTNA2CJ06 578 aa12.09□□□□□ -0.47
ITGA1-203ENST00000504669 SAMD1Q6SPF0 538 aaPredicted RBP12.09□□□□□ -0.47
ITGA1-203ENST00000504669 EPS15P42566 896 aa12.09□□□□□ -0.47
ITGA1-203ENST00000504669 CALR3Q96L12 384 aaKnown RBP12.09□□□□□ -0.47
ITGA1-203ENST00000504669 EPB41L2O43491 1005 aaKnown RBP12.09□□□□□ -0.47
ITGA1-203ENST00000504669 TSNAXIP1Q2TAA8 658 aa12.09□□□□□ -0.47
ITGA1-203ENST00000504669 CCDC183Q5T5S1 534 aa12.09□□□□□ -0.47
ITGA1-203ENST00000504669 MYRIPQ8NFW9 859 aa12.09□□□□□ -0.47
ITGA1-203ENST00000504669 ZC4H2Q9NQZ6 224 aa12.09□□□□□ -0.47
ITGA1-203ENST00000504669 DACH1Q9UI36 760 aa12.09□□□□□ -0.47
ITGA1-203ENST00000504669 TRDNQ13061 729 aa12.08□□□□□ -0.48
ITGA1-203ENST00000504669 ARHGAP29Q52LW3 1261 aa12.08□□□□□ -0.48
ITGA1-203ENST00000504669 MICAL1Q8TDZ2 1067 aa12.08□□□□□ -0.48
ITGA1-203ENST00000504669 LUC7L3O95232 432 aaKnown RBP12.08□□□□□ -0.48
ITGA1-203ENST00000504669 FLIIQ13045 1269 aa12.08□□□□□ -0.48
ITGA1-203ENST00000504669 KIF4BQ2VIQ3 1234 aa12.08□□□□□ -0.48
ITGA1-203ENST00000504669 CACNA2D3Q8IZS8 1091 aa12.08□□□□□ -0.48
ITGA1-203ENST00000504669 LRRC43Q8N309 656 aa12.08□□□□□ -0.48
ITGA1-203ENST00000504669 NUP62CLQ9H1M0 184 aa12.08□□□□□ -0.48
ITGA1-203ENST00000504669 USP25Q9UHP3 1055 aa12.08□□□□□ -0.48
ITGA1-203ENST00000504669 EIF5P55010 431 aaKnown RBP12.08□□□□□ -0.48
ITGA1-203ENST00000504669 ABTB1Q969K4 478 aaPredicted RBP12.08□□□□□ -0.48
ITGA1-203ENST00000504669 CREB3O43889 395 aa12.08□□□□□ -0.48
ITGA1-203ENST00000504669 RNF8O76064 485 aa12.08□□□□□ -0.48
ITGA1-203ENST00000504669 SESN3P58005 492 aa12.08□□□□□ -0.48
ITGA1-203ENST00000504669 PRPF31Q8WWY3 499 aaKnown RBP12.08□□□□□ -0.48
ITGA1-203ENST00000504669 ATRIPQ8WXE1 791 aa12.08□□□□□ -0.48
ITGA1-203ENST00000504669 SLU7O95391 586 aaKnown RBP12.08□□□□□ -0.48
ITGA1-203ENST00000504669 CCDC158Q5M9N0 1113 aa12.08□□□□□ -0.48
ITGA1-203ENST00000504669 ERCC3P19447 782 aa12.07□□□□□ -0.48
ITGA1-203ENST00000504669 SPATS2Q86XZ4 545 aaKnown RBP12.07□□□□□ -0.48
ITGA1-203ENST00000504669 MKRN1Q9UHC7 482 aaKnown RBP12.07□□□□□ -0.48
ITGA1-203ENST00000504669 COG6Q9Y2V7 657 aa12.07□□□□□ -0.48
ITGA1-203ENST00000504669 ARID3CA6NKF2 412 aa12.07□□□□□ -0.48
ITGA1-203ENST00000504669 TMF1P82094 1093 aa12.07□□□□□ -0.48
ITGA1-203ENST00000504669 CCDC40Q4G0X9 1142 aa12.07□□□□□ -0.48
ITGA1-203ENST00000504669 SOGA3Q5TF21 947 aa12.07□□□□□ -0.48
ITGA1-203ENST00000504669 DDX23Q9BUQ8 820 aaKnown RBP12.07□□□□□ -0.48
ITGA1-203ENST00000504669 SPTY2D1Q68D10 685 aaPredicted RBP12.07□□□□□ -0.48
ITGA1-203ENST00000504669 SYNE3Q6ZMZ3 975 aa12.07□□□□□ -0.48
ITGA1-203ENST00000504669 AFAP1L1Q8TED9 768 aa12.07□□□□□ -0.48
ITGA1-203ENST00000504669 RRP7BPQ9NSQ0 103 aa12.07□□□□□ -0.48
ITGA1-203ENST00000504669 ZNF830Q96NB3 372 aaPredicted RBP12.07□□□□□ -0.48
ITGA1-203ENST00000504669 MARCH6O60337 910 aa12.06□□□□□ -0.48
ITGA1-203ENST00000504669 SFPQP23246 707 aaKnown RBP eCLIP12.06□□□□□ -0.48
ITGA1-203ENST00000504669 MCM6Q14566 821 aa12.06□□□□□ -0.48
ITGA1-203ENST00000504669 ZSCAN26Q16670 478 aa12.06□□□□□ -0.48
ITGA1-203ENST00000504669 PPP1R12CQ9BZL4 782 aa12.06□□□□□ -0.48
ITGA1-203ENST00000504669 LUC7LQ9NQ29 371 aaKnown RBP12.06□□□□□ -0.48
ITGA1-203ENST00000504669 TRIM35Q9UPQ4 493 aa12.06□□□□□ -0.48
ITGA1-203ENST00000504669 ARHGAP25P42331 645 aa12.06□□□□□ -0.48
ITGA1-203ENST00000504669 MCM2P49736 904 aa12.06□□□□□ -0.48
ITGA1-203ENST00000504669 ICE2Q659A1 982 aa12.06□□□□□ -0.48
ITGA1-203ENST00000504669 N4BP2L2Q92802 583 aaPredicted RBP12.06□□□□□ -0.48
ITGA1-203ENST00000504669 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.06□□□□□ -0.481e-6■□□□□ 9.3
ITGA1-203ENST00000504669 TAOK3Q9H2K8 898 aa12.06□□□□□ -0.48
ITGA1-203ENST00000504669 WDR33Q9C0J8 1336 aaKnown RBP12.06□□□□□ -0.48
ITGA1-203ENST00000504669 FAM76AQ8TAV0 307 aa12.06□□□□□ -0.48
ITGA1-203ENST00000504669 ROCK2O75116 1388 aaKnown RBP12.06□□□□□ -0.48
ITGA1-203ENST00000504669 PIP4K2AP48426 406 aaPredicted RBP12.06□□□□□ -0.48
ITGA1-203ENST00000504669 PSMD2Q13200 908 aa12.06□□□□□ -0.48
ITGA1-203ENST00000504669 MCTP2Q6DN12 878 aa12.05□□□□□ -0.48
ITGA1-203ENST00000504669 RUFY3Q7L099 469 aa12.05□□□□□ -0.48
ITGA1-203ENST00000504669 JRKLQ9Y4A0 524 aa12.05□□□□□ -0.48
ITGA1-203ENST00000504669 USH1CQ9Y6N9 552 aa12.05□□□□□ -0.48
ITGA1-203ENST00000504669 IRX1P78414 480 aaPredicted RBP12.05□□□□□ -0.48
ITGA1-203ENST00000504669 MKL2Q9ULH7 1088 aa12.05□□□□□ -0.48
ITGA1-203ENST00000504669 ZKSCAN1P17029 563 aaPredicted RBP12.05□□□□□ -0.48
ITGA1-203ENST00000504669 MAP3K11Q16584 847 aa12.05□□□□□ -0.48
ITGA1-203ENST00000504669 GSDMDP57764 484 aa12.04□□□□□ -0.48
ITGA1-203ENST00000504669 TMED1Q13445 227 aa12.04□□□□□ -0.48
ITGA1-203ENST00000504669 ZSCAN23Q3MJ62 389 aa12.04□□□□□ -0.48
ITGA1-203ENST00000504669 RUFY2Q8WXA3 655 aa12.04□□□□□ -0.48
ITGA1-203ENST00000504669 ZNF396Q96N95 335 aaPredicted RBP12.04□□□□□ -0.48
ITGA1-203ENST00000504669 CASQ2O14958 399 aaPredicted RBP12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms