RNA–Protein interactions for RNA: ENST00000504396.1

DHFR-202, Transcript of dihydrofolate reductase, humanhuman

TSL 2 BASIC

Gene DHFR, Length 1,447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-202ENST00000504396 PARP4Q9UKK3 1724 aaKnown RBP13.12□□□□□ -0.31
DHFR-202ENST00000504396 COL5A2P05997 1499 aaPredicted RBP13.12□□□□□ -0.31
DHFR-202ENST00000504396 BRD4O60885 1362 aaPredicted RBP13.12□□□□□ -0.31
DHFR-202ENST00000504396 CPDO75976 1380 aa13.12□□□□□ -0.31
DHFR-202ENST00000504396 THRAP3Q9Y2W1 955 aaKnown RBP13.12□□□□□ -0.31
DHFR-202ENST00000504396 USP19O94966 1318 aa13.11□□□□□ -0.31
DHFR-202ENST00000504396 PLEKHG3A1L390 1219 aa13.11□□□□□ -0.31
DHFR-202ENST00000504396 C11orf95C9JLR9 678 aaPredicted RBP13.11□□□□□ -0.31
DHFR-202ENST00000504396 GCP02774 474 aa13.11□□□□□ -0.31
DHFR-202ENST00000504396 SPON1Q9HCB6 807 aa13.11□□□□□ -0.31
DHFR-202ENST00000504396 SCUBE2Q9NQ36 999 aa13.11□□□□□ -0.31
DHFR-202ENST00000504396 OVOS2A0A0G2JMS6 1433 aa13.11□□□□□ -0.31
DHFR-202ENST00000504396 OVOS2A0A0J9YW53 1432 aa13.11□□□□□ -0.31
DHFR-202ENST00000504396 CRB1P82279 1406 aa13.11□□□□□ -0.31
DHFR-202ENST00000504396 OVOS2Q6IE36 1432 aa13.11□□□□□ -0.31
DHFR-202ENST00000504396 LRRC37A3O60309 1634 aa13.1□□□□□ -0.31
DHFR-202ENST00000504396 QRICH2Q9H0J4 1663 aa13.1□□□□□ -0.31
DHFR-202ENST00000504396 TOM1L2Q6ZVM7 507 aa13.09□□□□□ -0.31
DHFR-202ENST00000504396 CENPJQ9HC77 1338 aaPredicted RBP13.09□□□□□ -0.31
DHFR-202ENST00000504396 KCNQ2O43526 872 aa13.08□□□□□ -0.32
DHFR-202ENST00000504396 NLRP6P59044 892 aa13.08□□□□□ -0.32
DHFR-202ENST00000504396 DDB1Q16531 1140 aa13.08□□□□□ -0.32
DHFR-202ENST00000504396 NBPF1Q3BBV0 1214 aa13.07□□□□□ -0.32
DHFR-202ENST00000504396 AKAP12Q02952 1782 aa13.07□□□□□ -0.32
DHFR-202ENST00000504396 WNK3Q9BYP7 1800 aa13.06□□□□□ -0.32
DHFR-202ENST00000504396 SOX12O15370 315 aa13.06□□□□□ -0.32
DHFR-202ENST00000504396 DPY19L2Q6NUT2 758 aa13.06□□□□□ -0.32
DHFR-202ENST00000504396 RGPD3A6NKT7 1758 aaPredicted RBP13.06□□□□□ -0.32
DHFR-202ENST00000504396 RGPD4Q7Z3J3 1758 aa13.06□□□□□ -0.32
DHFR-202ENST00000504396 NINLQ9Y2I6 1382 aa13.06□□□□□ -0.32
DHFR-202ENST00000504396 SBF2Q86WG5 1849 aa13.06□□□□□ -0.32
DHFR-202ENST00000504396 USP6P35125 1406 aa13.06□□□□□ -0.32
DHFR-202ENST00000504396 PEAK1Q9H792 1746 aa13.05□□□□□ -0.32
DHFR-202ENST00000504396 SLIT3O75094 1523 aa13.05□□□□□ -0.32
DHFR-202ENST00000504396 CSB-PGBD3P0DP91 1061 aa13.05□□□□□ -0.32
DHFR-202ENST00000504396 CABP1Q9NZU7 370 aa13.05□□□□□ -0.32
DHFR-202ENST00000504396 PIK3C2AO00443 1686 aa13.04□□□□□ -0.32
DHFR-202ENST00000504396 AATKQ6ZMQ8 1374 aa13.04□□□□□ -0.32
DHFR-202ENST00000504396 ANO8Q9HCE9 1232 aaPredicted RBP13.03□□□□□ -0.32
DHFR-202ENST00000504396 CASZ1Q86V15 1759 aa13.02□□□□□ -0.32
DHFR-202ENST00000504396 PLSCR1O15162 318 aa13.02□□□□□ -0.33
DHFR-202ENST00000504396 ZBTB7AO95365 584 aa13.02□□□□□ -0.33
DHFR-202ENST00000504396 WDR17Q8IZU2 1322 aa13.02□□□□□ -0.33
DHFR-202ENST00000504396 CPSF1Q10570 1443 aaKnown RBP13.02□□□□□ -0.33
DHFR-202ENST00000504396 RGPD5Q99666 1765 aa13.01□□□□□ -0.33
DHFR-202ENST00000504396 PTF1AQ7RTS3 328 aa13.01□□□□□ -0.33
DHFR-202ENST00000504396 L3MBTL3Q96JM7 780 aaPredicted RBP13.01□□□□□ -0.33
DHFR-202ENST00000504396 EVC2Q86UK5 1308 aa13.01□□□□□ -0.33
DHFR-202ENST00000504396 MYOM1P52179 1685 aa13.01□□□□□ -0.33
DHFR-202ENST00000504396 COL18A1P39060 1754 aa13□□□□□ -0.33
DHFR-202ENST00000504396 CDCA7Q9BWT1 371 aaPredicted RBP13□□□□□ -0.33
DHFR-202ENST00000504396 STK32BQ9NY57 414 aa13□□□□□ -0.33
DHFR-202ENST00000504396 TRPM1Q7Z4N2 1603 aa12.99□□□□□ -0.33
DHFR-202ENST00000504396 MARCH10Q8NA82 808 aaPredicted RBP12.99□□□□□ -0.33
DHFR-202ENST00000504396 PDGFDQ9GZP0 370 aaPredicted RBP12.99□□□□□ -0.33
DHFR-202ENST00000504396 AXIN2Q9Y2T1 843 aa12.99□□□□□ -0.33
DHFR-202ENST00000504396 KCNH5Q8NCM2 988 aa12.98□□□□□ -0.33
DHFR-202ENST00000504396 BCL9O00512 1426 aa12.98□□□□□ -0.33
DHFR-202ENST00000504396 MS4A4AQ96JQ5 239 aa12.97□□□□□ -0.33
DHFR-202ENST00000504396 TTC21BQ7Z4L5 1316 aa12.97□□□□□ -0.33
DHFR-202ENST00000504396 EXOC5O00471 708 aa12.96□□□□□ -0.33
DHFR-202ENST00000504396 TXNRD1Q16881 649 aa12.96□□□□□ -0.33
DHFR-202ENST00000504396 ABCC6O95255 1503 aa12.96□□□□□ -0.34
DHFR-202ENST00000504396 ARHGEF25Q86VW2 580 aa12.96□□□□□ -0.34
DHFR-202ENST00000504396 HS6ST3Q8IZP7 471 aa12.96□□□□□ -0.34
DHFR-202ENST00000504396 SLAIN1Q8ND83 568 aa12.96□□□□□ -0.34
DHFR-202ENST00000504396 CARD10Q9BWT7 1032 aa12.96□□□□□ -0.34
DHFR-202ENST00000504396 MFRPQ9BY79 579 aa12.96□□□□□ -0.34
DHFR-202ENST00000504396 TNS2Q63HR2 1409 aa12.95□□□□□ -0.34
DHFR-202ENST00000504396 ROCK2O75116 1388 aaKnown RBP12.95□□□□□ -0.34
DHFR-202ENST00000504396 KTN1Q86UP2 1357 aaKnown RBP12.95□□□□□ -0.34
DHFR-202ENST00000504396 CCDC7Q96M83 1385 aa12.95□□□□□ -0.34
DHFR-202ENST00000504396 NHSQ6T4R5 1651 aa12.95□□□□□ -0.34
DHFR-202ENST00000504396 ACSBG1Q96GR2 724 aa12.95□□□□□ -0.34
DHFR-202ENST00000504396 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.95□□□□□ -0.34
DHFR-202ENST00000504396 BOLA1Q9Y3E2 137 aa12.95□□□□□ -0.34
DHFR-202ENST00000504396 NFAT5O94916 1531 aa12.94□□□□□ -0.34
DHFR-202ENST00000504396 TTC21AQ8NDW8 1320 aa12.94□□□□□ -0.34
DHFR-202ENST00000504396 SLC15A2Q16348 729 aa12.94□□□□□ -0.34
DHFR-202ENST00000504396 C3orf67Q6ZVT6 689 aa12.94□□□□□ -0.34
DHFR-202ENST00000504396 FHDC1Q9C0D6 1143 aaPredicted RBP12.94□□□□□ -0.34
DHFR-202ENST00000504396 G3V3G9 751 aa12.93□□□□□ -0.34
DHFR-202ENST00000504396 PTGER2P43116 358 aa12.93□□□□□ -0.34
DHFR-202ENST00000504396 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.93□□□□□ -0.34
DHFR-202ENST00000504396 FBXO22Q8NEZ5 403 aa12.93□□□□□ -0.34
DHFR-202ENST00000504396 L3MBTL2Q969R5 705 aa12.93□□□□□ -0.34
DHFR-202ENST00000504396 MTFR1LQ9H019 292 aa12.93□□□□□ -0.34
DHFR-202ENST00000504396 NLRP2Q9NX02 1062 aa12.93□□□□□ -0.34
DHFR-202ENST00000504396 AMER1Q5JTC6 1135 aaPredicted RBP12.92□□□□□ -0.34
DHFR-202ENST00000504396 LTN1O94822 1766 aa12.92□□□□□ -0.34
DHFR-202ENST00000504396 MON2Q7Z3U7 1717 aa12.92□□□□□ -0.34
DHFR-202ENST00000504396 NEUROD1Q13562 356 aa12.91□□□□□ -0.34
DHFR-202ENST00000504396 SYT17Q9BSW7 474 aa12.91□□□□□ -0.34
DHFR-202ENST00000504396 RTN4Q9NQC3 1192 aaKnown RBP12.91□□□□□ -0.34
DHFR-202ENST00000504396 USP54Q70EL1 1684 aa12.91□□□□□ -0.34
DHFR-202ENST00000504396 ZNF784Q8NCA9 323 aaPredicted RBP12.9□□□□□ -0.34
DHFR-202ENST00000504396 BTAF1O14981 1849 aa12.9□□□□□ -0.35
DHFR-202ENST00000504396 IL2RBP14784 551 aa12.89□□□□□ -0.35
DHFR-202ENST00000504396 TMC1Q8TDI8 760 aa12.89□□□□□ -0.35
DHFR-202ENST00000504396 ERBB3P21860 1342 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms