RNA–Protein interactions for RNA: ENST00000504263.1

PCAT4-201, prostate cancer associated transcript 4, humanhuman

TSL 1 (best) BASIC

Gene PCAT4, Length 2,091 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT4-201ENST00000504263 EHBP1L1Q8N3D4 1523 aa4.42□□□□□ -1.7
PCAT4-201ENST00000504263 DDX11L8A8MPP1 907 aa4.42□□□□□ -1.7
PCAT4-201ENST00000504263 DNTTIP2Q5QJE6 756 aaKnown RBP4.42□□□□□ -1.7
PCAT4-201ENST00000504263 SASS6Q6UVJ0 657 aa4.42□□□□□ -1.7
PCAT4-201ENST00000504263 IFNLR1Q8IU57 520 aaPredicted RBP4.42□□□□□ -1.7
PCAT4-201ENST00000504263 SPOCK2Q92563 424 aa4.42□□□□□ -1.7
PCAT4-201ENST00000504263 ZNF516Q92618 1163 aa4.42□□□□□ -1.7
PCAT4-201ENST00000504263 KIAA1468Q9P260 1216 aa4.42□□□□□ -1.7
PCAT4-201ENST00000504263 DNMT3AQ9Y6K1 912 aaPredicted RBP4.42□□□□□ -1.7
PCAT4-201ENST00000504263 SUPT6HQ7KZ85 1726 aaKnown RBP4.41□□□□□ -1.7
PCAT4-201ENST00000504263 KIDINS220Q9ULH0 1771 aa4.41□□□□□ -1.7
PCAT4-201ENST00000504263 SAMD9LQ8IVG5 1584 aa4.41□□□□□ -1.7
PCAT4-201ENST00000504263 REREQ9P2R6 1566 aa4.41□□□□□ -1.7
PCAT4-201ENST00000504263 DIP2CQ9Y2E4 1556 aa4.41□□□□□ -1.7
PCAT4-201ENST00000504263 UQCRHLA0A096LP55 91 aa4.41□□□□□ -1.7
PCAT4-201ENST00000504263 TULP1O00294 542 aaPredicted RBP4.41□□□□□ -1.7
PCAT4-201ENST00000504263 RIOK3O14730 519 aaKnown RBP4.41□□□□□ -1.7
PCAT4-201ENST00000504263 UQCRHP07919 91 aa4.41□□□□□ -1.7
PCAT4-201ENST00000504263 TSPY4P0CV99 314 aa4.41□□□□□ -1.7
PCAT4-201ENST00000504263 TSPY10P0CW01 314 aa4.41□□□□□ -1.7
PCAT4-201ENST00000504263 MSNP26038 577 aaKnown RBP4.41□□□□□ -1.7
PCAT4-201ENST00000504263 GTF2F1P35269 517 aaKnown RBP eCLIP4.41□□□□□ -1.7
PCAT4-201ENST00000504263 SLC19A1P41440 591 aa4.41□□□□□ -1.7
PCAT4-201ENST00000504263 CEBPAP49715 358 aaPredicted RBP4.41□□□□□ -1.7
PCAT4-201ENST00000504263 HAP1P54257 671 aaPredicted RBP4.41□□□□□ -1.7
PCAT4-201ENST00000504263 SKOR2Q2VWA4 1001 aaPredicted RBP4.41□□□□□ -1.7
PCAT4-201ENST00000504263 TPRNQ4KMQ1 711 aa4.41□□□□□ -1.7
PCAT4-201ENST00000504263 OXER1Q8TDS5 423 aa4.41□□□□□ -1.7
PCAT4-201ENST00000504263 LRCH3Q96II8 777 aa4.41□□□□□ -1.7
PCAT4-201ENST00000504263 NOL7Q9UMY1 257 aaKnown RBP4.41□□□□□ -1.7
PCAT4-201ENST00000504263 ZNF644Q9H582 1327 aaPredicted RBP4.41□□□□□ -1.7
PCAT4-201ENST00000504263 AGLP35573 1532 aa4.41□□□□□ -1.7
PCAT4-201ENST00000504263 SYCP2Q9BX26 1530 aa4.41□□□□□ -1.7
PCAT4-201ENST00000504263 TRAK2O60296 914 aa4.41□□□□□ -1.7
PCAT4-201ENST00000504263 GGCXP38435 758 aa4.41□□□□□ -1.7
PCAT4-201ENST00000504263 RBM25P49756 843 aaKnown RBP4.41□□□□□ -1.7
PCAT4-201ENST00000504263 GPAT2Q6NUI2 795 aa4.41□□□□□ -1.7
PCAT4-201ENST00000504263 EMID1Q96A84 441 aaPredicted RBP4.41□□□□□ -1.7
PCAT4-201ENST00000504263 RCAN3Q9UKA8 241 aa4.41□□□□□ -1.7
PCAT4-201ENST00000504263 USP19O94966 1318 aa4.4□□□□□ -1.7
PCAT4-201ENST00000504263 ROCK2O75116 1388 aaKnown RBP4.4□□□□□ -1.7
PCAT4-201ENST00000504263 TIAM1Q13009 1591 aa4.4□□□□□ -1.7
PCAT4-201ENST00000504263 ABCA6Q8N139 1617 aa4.4□□□□□ -1.7
PCAT4-201ENST00000504263 TULP2O00295 520 aa4.4□□□□□ -1.71
PCAT4-201ENST00000504263 PTMAP06454 111 aaKnown RBP4.4□□□□□ -1.71
PCAT4-201ENST00000504263 GABPB1Q06547 395 aaPredicted RBP4.4□□□□□ -1.71
PCAT4-201ENST00000504263 NBPF1Q3BBV0 1214 aa4.4□□□□□ -1.71
PCAT4-201ENST00000504263 GRIPAP1Q4V328 841 aa4.4□□□□□ -1.71
PCAT4-201ENST00000504263 KANK4Q5T7N3 995 aaPredicted RBP4.4□□□□□ -1.71
PCAT4-201ENST00000504263 GGT6Q6P531 493 aa4.4□□□□□ -1.71
PCAT4-201ENST00000504263 ZNF598Q86UK7 904 aaKnown RBP4.4□□□□□ -1.71
PCAT4-201ENST00000504263 CREBRFQ8IUR6 639 aa4.4□□□□□ -1.71
PCAT4-201ENST00000504263 CRIPAKQ8N1N5 446 aa4.4□□□□□ -1.71
PCAT4-201ENST00000504263 CEP120Q8N960 986 aa4.4□□□□□ -1.71
PCAT4-201ENST00000504263 NKX2-3Q8TAU0 364 aa4.4□□□□□ -1.71
PCAT4-201ENST00000504263 TMUB1Q9BVT8 246 aa4.4□□□□□ -1.71
PCAT4-201ENST00000504263 KRTAP4-5Q9BYR2 181 aa4.4□□□□□ -1.71
PCAT4-201ENST00000504263 ARHGAP31Q2M1Z3 1444 aa4.4□□□□□ -1.71
PCAT4-201ENST00000504263 NLRP1Q9C000 1473 aa4.4□□□□□ -1.71
PCAT4-201ENST00000504263 CCDC66A2RUB6 948 aa4.39□□□□□ -1.71
PCAT4-201ENST00000504263 HSPA2P54652 639 aa4.39□□□□□ -1.71
PCAT4-201ENST00000504263 EIF4G2P78344 907 aaKnown RBP eCLIP4.39□□□□□ -1.71
PCAT4-201ENST00000504263 SPRYD7Q5W111 196 aa4.39□□□□□ -1.71
PCAT4-201ENST00000504263 PRIMPOLQ96LW4 560 aa4.39□□□□□ -1.71
PCAT4-201ENST00000504263 HIRIP3Q9BW71 556 aaPredicted RBP4.39□□□□□ -1.71
PCAT4-201ENST00000504263 EFCC1Q9HA90 598 aa4.39□□□□□ -1.71
PCAT4-201ENST00000504263 SEPT9Q9UHD8 586 aaPredicted RBP4.39□□□□□ -1.71
PCAT4-201ENST00000504263 RTEL1-TNFRSF6BF6WH68 1400 aa4.39□□□□□ -1.71
PCAT4-201ENST00000504263 LRRC9Q6ZRR7 1453 aa4.39□□□□□ -1.71
PCAT4-201ENST00000504263 LMTK3Q96Q04 1460 aa4.39□□□□□ -1.71
PCAT4-201ENST00000504263 ATP7AQ04656 1500 aa4.39□□□□□ -1.71
PCAT4-201ENST00000504263 CFAP65Q6ZU64 1925 aaKnown RBP4.39□□□□□ -1.71
PCAT4-201ENST00000504263 VGLL3A8MV65 326 aa4.39□□□□□ -1.71
PCAT4-201ENST00000504263 GDF9O60383 454 aa4.39□□□□□ -1.71
PCAT4-201ENST00000504263 ONECUT3O60422 494 aaPredicted RBP4.39□□□□□ -1.71
PCAT4-201ENST00000504263 A2MP01023 1474 aa4.39□□□□□ -1.71
PCAT4-201ENST00000504263 HSP90AB1P08238 724 aaKnown RBP4.39□□□□□ -1.71
PCAT4-201ENST00000504263 HSPA5P11021 654 aaKnown RBP4.39□□□□□ -1.71
PCAT4-201ENST00000504263 COL9A1P20849 921 aa4.39□□□□□ -1.71
PCAT4-201ENST00000504263 PPP4CP60510 307 aa4.39□□□□□ -1.71
PCAT4-201ENST00000504263 HMGN5P82970 282 aaKnown RBP4.39□□□□□ -1.71
PCAT4-201ENST00000504263 MYRIPQ8NFW9 859 aa4.39□□□□□ -1.71
PCAT4-201ENST00000504263 PNISRQ8TF01 805 aaKnown RBP4.39□□□□□ -1.71
PCAT4-201ENST00000504263 PDLIM2Q96JY6 352 aa4.39□□□□□ -1.71
PCAT4-201ENST00000504263 FEZ1Q99689 392 aa4.39□□□□□ -1.71
PCAT4-201ENST00000504263 PRDM10Q9NQV6 1147 aa4.39□□□□□ -1.71
PCAT4-201ENST00000504263 CHMP5Q9NZZ3 219 aa4.39□□□□□ -1.71
PCAT4-201ENST00000504263 MBD5Q9P267 1494 aa4.39□□□□□ -1.71
PCAT4-201ENST00000504263 HDAC5Q9UQL6 1122 aa4.39□□□□□ -1.71
PCAT4-201ENST00000504263 R3HCC1Q9Y3T6 440 aaKnown RBP4.39□□□□□ -1.71
PCAT4-201ENST00000504263 ADGBQ8N7X0 1667 aa4.38□□□□□ -1.71
PCAT4-201ENST00000504263 DHX29Q7Z478 1369 aaKnown RBP4.38□□□□□ -1.71
PCAT4-201ENST00000504263 COBLO75128 1261 aa4.38□□□□□ -1.71
PCAT4-201ENST00000504263 PKD2Q13563 968 aa4.38□□□□□ -1.71
PCAT4-201ENST00000504263 RALBP1Q15311 655 aa4.38□□□□□ -1.71
PCAT4-201ENST00000504263 FAM98CQ17RN3 349 aaKnown RBP4.38□□□□□ -1.71
PCAT4-201ENST00000504263 PREX1Q8TCU6 1659 aa4.38□□□□□ -1.71
PCAT4-201ENST00000504263 CAMSAP2Q08AD1 1489 aa4.38□□□□□ -1.71
PCAT4-201ENST00000504263 UHRF1BP1Q6BDS2 1440 aa4.38□□□□□ -1.71
PCAT4-201ENST00000504263 SPATA31E1Q6ZUB1 1445 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms