RNA–Protein interactions for RNA: ENST00000498810.1

CDK11A-222, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 2

Gene CDK11A, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-222ENST00000498810 VPS72Q15906 364 aa14.96□□□□□ -0.01
CDK11A-222ENST00000498810 CHRNA2Q15822 529 aa14.95□□□□□ -0.02
CDK11A-222ENST00000498810 HDGFL2Q7Z4V5 671 aaPredicted RBP14.95□□□□□ -0.02
CDK11A-222ENST00000498810 STRN4Q9NRL3 753 aa14.95□□□□□ -0.02
CDK11A-222ENST00000498810 ST20-MTHFSA0A0A6YYL1 179 aa14.94□□□□□ -0.02
CDK11A-222ENST00000498810 SLC24A1O60721 1099 aa14.94□□□□□ -0.02
CDK11A-222ENST00000498810 HS6ST3Q8IZP7 471 aa14.94□□□□□ -0.02
CDK11A-222ENST00000498810 TIMELESSQ9UNS1 1208 aa14.94□□□□□ -0.02
CDK11A-222ENST00000498810 EVA1CP58658 441 aa14.93□□□□□ -0.02
CDK11A-222ENST00000498810 UPF1Q92900 1129 aaKnown RBP eCLIP14.93□□□□□ -0.02
CDK11A-222ENST00000498810 USP19O94966 1318 aa14.92□□□□□ -0.02
CDK11A-222ENST00000498810 TTC21AQ8NDW8 1320 aa14.92□□□□□ -0.02
CDK11A-222ENST00000498810 SLIT3O75094 1523 aa14.92□□□□□ -0.02
CDK11A-222ENST00000498810 TERF2IPQ9NYB0 399 aa14.92□□□□□ -0.02
CDK11A-222ENST00000498810 TTC21BQ7Z4L5 1316 aa14.92□□□□□ -0.02
CDK11A-222ENST00000498810 LTN1O94822 1766 aa14.91□□□□□ -0.02
CDK11A-222ENST00000498810 LMO7Q8WWI1 1683 aa14.91□□□□□ -0.02
CDK11A-222ENST00000498810 NINLQ9Y2I6 1382 aa14.91□□□□□ -0.02
CDK11A-222ENST00000498810 TMF1P82094 1093 aa14.91□□□□□ -0.02
CDK11A-222ENST00000498810 TMEM92Q6UXU6 159 aa14.91□□□□□ -0.02
CDK11A-222ENST00000498810 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.91□□□□□ -0.02
CDK11A-222ENST00000498810 GCP02774 474 aa14.9□□□□□ -0.02
CDK11A-222ENST00000498810 FAM98CQ17RN3 349 aaKnown RBP14.9□□□□□ -0.02
CDK11A-222ENST00000498810 SEPT12Q8IYM1 358 aa14.9□□□□□ -0.02
CDK11A-222ENST00000498810 RGPD5Q99666 1765 aa14.9□□□□□ -0.02
CDK11A-222ENST00000498810 CPSF1Q10570 1443 aaKnown RBP14.9□□□□□ -0.02
CDK11A-222ENST00000498810 CPDO75976 1380 aa14.89□□□□□ -0.03
CDK11A-222ENST00000498810 USP35Q9P2H5 1018 aa14.89□□□□□ -0.03
CDK11A-222ENST00000498810 USP54Q70EL1 1684 aa14.89□□□□□ -0.03
CDK11A-222ENST00000498810 SSH2Q76I76 1423 aa14.89□□□□□ -0.03
CDK11A-222ENST00000498810 A0A1W2PP64 1363 aa14.88□□□□□ -0.03
CDK11A-222ENST00000498810 KIF20BQ96Q89 1820 aa14.88□□□□□ -0.03
CDK11A-222ENST00000498810 CDCA8Q53HL2 280 aa14.88□□□□□ -0.03
CDK11A-222ENST00000498810 KCNH5Q8NCM2 988 aa14.88□□□□□ -0.03
CDK11A-222ENST00000498810 EDC4Q6P2E9 1401 aaKnown RBP14.88□□□□□ -0.03
CDK11A-222ENST00000498810 THSD7AQ9UPZ6 1657 aa14.87□□□□□ -0.03
CDK11A-222ENST00000498810 SF3B2Q13435 895 aaKnown RBP14.87□□□□□ -0.03
CDK11A-222ENST00000498810 SLC12A5Q9H2X9 1139 aa14.87□□□□□ -0.03
CDK11A-222ENST00000498810 PCDH10Q9P2E7 1040 aa14.87□□□□□ -0.03
CDK11A-222ENST00000498810 SPATA31A5Q5VU36 1347 aa14.87□□□□□ -0.03
CDK11A-222ENST00000498810 SPATA31A7Q8IWB4 1347 aa14.87□□□□□ -0.03
CDK11A-222ENST00000498810 WNK3Q9BYP7 1800 aa14.87□□□□□ -0.03
CDK11A-222ENST00000498810 CAMTA1Q9Y6Y1 1673 aa14.87□□□□□ -0.03
CDK11A-222ENST00000498810 HOXB3P14651 431 aaPredicted RBP14.86□□□□□ -0.03
CDK11A-222ENST00000498810 KRT27Q7Z3Y8 459 aa14.86□□□□□ -0.03
CDK11A-222ENST00000498810 TESK2Q96S53 571 aa14.86□□□□□ -0.03
CDK11A-222ENST00000498810 COL5A2P05997 1499 aaPredicted RBP14.86□□□□□ -0.03
CDK11A-222ENST00000498810 CD163L1Q9NR16 1453 aa14.86□□□□□ -0.03
CDK11A-222ENST00000498810 RGPD1P0DJD0 1748 aa14.86□□□□□ -0.03
CDK11A-222ENST00000498810 PUS7Q96PZ0 661 aaKnown RBP14.85□□□□□ -0.03
CDK11A-222ENST00000498810 POLR3GLQ9BT43 218 aa14.85□□□□□ -0.03
CDK11A-222ENST00000498810 MYOM1P52179 1685 aa14.84□□□□□ -0.03
CDK11A-222ENST00000498810 NFAT5O94916 1531 aa14.84□□□□□ -0.03
CDK11A-222ENST00000498810 CSB-PGBD3P0DP91 1061 aa14.84□□□□□ -0.03
CDK11A-222ENST00000498810 SPATA31A1Q5TZJ5 1347 aa14.84□□□□□ -0.03
CDK11A-222ENST00000498810 COL18A1P39060 1754 aa14.83□□□□□ -0.03
CDK11A-222ENST00000498810 NME9Q86XW9 330 aa14.83□□□□□ -0.04
CDK11A-222ENST00000498810 AATKQ6ZMQ8 1374 aa14.83□□□□□ -0.04
CDK11A-222ENST00000498810 CRB1P82279 1406 aa14.83□□□□□ -0.04
CDK11A-222ENST00000498810 ABCC6O95255 1503 aa14.82□□□□□ -0.04
CDK11A-222ENST00000498810 LARP1Q6PKG0 1096 aaKnown RBP14.82□□□□□ -0.04
CDK11A-222ENST00000498810 TOM1L2Q6ZVM7 507 aa14.82□□□□□ -0.04
CDK11A-222ENST00000498810 PARP4Q9UKK3 1724 aaKnown RBP14.82□□□□□ -0.04
CDK11A-222ENST00000498810 ANKRD36BQ8N2N9 1353 aa14.82□□□□□ -0.04
CDK11A-222ENST00000498810 BLMP54132 1417 aaPredicted RBP14.82□□□□□ -0.04
CDK11A-222ENST00000498810 CCDC125Q86Z20 511 aa14.81□□□□□ -0.04
CDK11A-222ENST00000498810 TCP11L2Q8N4U5 519 aa14.81□□□□□ -0.04
CDK11A-222ENST00000498810 EP400Q96L91 3159 aa14.81□□□□□ -0.04
CDK11A-222ENST00000498810 EIF4G2P78344 907 aaKnown RBP eCLIP14.8□□□□□ -0.04
CDK11A-222ENST00000498810 COG3Q96JB2 828 aa14.8□□□□□ -0.04
CDK11A-222ENST00000498810 USP31Q70CQ4 1352 aa14.8□□□□□ -0.04
CDK11A-222ENST00000498810 LRRC37A3O60309 1634 aa14.79□□□□□ -0.04
CDK11A-222ENST00000498810 ONECUT3O60422 494 aaPredicted RBP14.79□□□□□ -0.04
CDK11A-222ENST00000498810 PPP1R37O75864 691 aa14.79□□□□□ -0.04
CDK11A-222ENST00000498810 PDE3BQ13370 1112 aa14.79□□□□□ -0.04
CDK11A-222ENST00000498810 FAM208AQ9UK61 1670 aaKnown RBP14.79□□□□□ -0.04
CDK11A-222ENST00000498810 OVOS2A0A0J9YW53 1432 aa14.78□□□□□ -0.04
CDK11A-222ENST00000498810 OVOS2Q6IE36 1432 aa14.78□□□□□ -0.04
CDK11A-222ENST00000498810 THRAP3Q9Y2W1 955 aaKnown RBP14.78□□□□□ -0.04
CDK11A-222ENST00000498810 WDR17Q8IZU2 1322 aa14.77□□□□□ -0.04
CDK11A-222ENST00000498810 BARGINQ6ZT62 677 aa14.77□□□□□ -0.05
CDK11A-222ENST00000498810 ARHGEF25Q86VW2 580 aa14.77□□□□□ -0.05
CDK11A-222ENST00000498810 MARVELD3Q96A59 401 aa14.77□□□□□ -0.05
CDK11A-222ENST00000498810 TNS1Q9HBL0 1735 aaKnown RBP14.77□□□□□ -0.05
CDK11A-222ENST00000498810 FAM182BQ5T319 152 aa14.76□□□□□ -0.05
CDK11A-222ENST00000498810 BAG6P46379 1132 aa14.75□□□□□ -0.05
CDK11A-222ENST00000498810 NSD3Q9BZ95 1437 aa14.75□□□□□ -0.05
CDK11A-222ENST00000498810 HSPA5P11021 654 aaKnown RBP14.74□□□□□ -0.05
CDK11A-222ENST00000498810 NKX1-1Q15270 411 aaPredicted RBP14.74□□□□□ -0.05
CDK11A-222ENST00000498810 DOK7Q18PE1 504 aa14.74□□□□□ -0.05
CDK11A-222ENST00000498810 ANKRD26Q9UPS8 1709 aa14.73□□□□□ -0.05
CDK11A-222ENST00000498810 KIF3CO14782 793 aa14.73□□□□□ -0.05
CDK11A-222ENST00000498810 AMPHP49418 695 aa14.73□□□□□ -0.05
CDK11A-222ENST00000498810 FAM196AQ6ZSG2 479 aa14.73□□□□□ -0.05
CDK11A-222ENST00000498810 CDAN1Q8IWY9 1227 aa14.73□□□□□ -0.05
CDK11A-222ENST00000498810 NLRP2Q9NX02 1062 aa14.73□□□□□ -0.05
CDK11A-222ENST00000498810 AXIN2Q9Y2T1 843 aa14.73□□□□□ -0.05
CDK11A-222ENST00000498810 CCDC7Q96M83 1385 aa14.73□□□□□ -0.05
CDK11A-222ENST00000498810 DDB1Q16531 1140 aa14.72□□□□□ -0.05
CDK11A-222ENST00000498810 GGNBP2Q9H3C7 697 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms