RNA–Protein interactions for RNA: ENST00000498325.5

HMGXB4-208, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-208ENST00000498325 FAM9AQ8IZU1 332 aaPredicted RBP8.52□□□□□ -1.05
HMGXB4-208ENST00000498325 ARMC2Q8NEN0 867 aa8.52□□□□□ -1.05
HMGXB4-208ENST00000498325 MAP4K5Q9Y4K4 846 aa8.52□□□□□ -1.05
HMGXB4-208ENST00000498325 DNMT3AQ9Y6K1 912 aaPredicted RBP8.52□□□□□ -1.05
HMGXB4-208ENST00000498325 PER1O15534 1290 aaPredicted RBP8.51□□□□□ -1.05
HMGXB4-208ENST00000498325 RNFT1Q5M7Z0 435 aa8.51□□□□□ -1.05
HMGXB4-208ENST00000498325 CCDC155Q8N6L0 562 aa8.51□□□□□ -1.05
HMGXB4-208ENST00000498325 EEA1Q15075 1411 aa8.51□□□□□ -1.05
HMGXB4-208ENST00000498325 ERICH3Q5RHP9 1530 aa8.5□□□□□ -1.05
HMGXB4-208ENST00000498325 IGHA1P01876 353 aa8.5□□□□□ -1.05
HMGXB4-208ENST00000498325 PRPF38BQ5VTL8 546 aaKnown RBP8.5□□□□□ -1.05
HMGXB4-208ENST00000498325 SH3RF1Q7Z6J0 888 aa8.5□□□□□ -1.05
HMGXB4-208ENST00000498325 CABLES1Q8TDN4 633 aa8.5□□□□□ -1.05
HMGXB4-208ENST00000498325 TSC1Q92574 1164 aa8.5□□□□□ -1.05
HMGXB4-208ENST00000498325 BIVM-ERCC5R4GMW8 1640 aa8.5□□□□□ -1.05
HMGXB4-208ENST00000498325 MAGEB6P1A0A0J9YX57 407 aa8.49□□□□□ -1.05
HMGXB4-208ENST00000498325 NBPF14Q5TI25 921 aa8.49□□□□□ -1.05
HMGXB4-208ENST00000498325 RIC3Q7Z5B4 369 aa8.49□□□□□ -1.05
HMGXB4-208ENST00000498325 TRMT44Q8IYL2 757 aaKnown RBP8.49□□□□□ -1.05
HMGXB4-208ENST00000498325 WHAMMQ8TF30 809 aa8.49□□□□□ -1.05
HMGXB4-208ENST00000498325 LOC105371045A0A1W2PR82 267 aa8.48□□□□□ -1.05
HMGXB4-208ENST00000498325 SLURP2P0DP57 97 aa8.48□□□□□ -1.05
HMGXB4-208ENST00000498325 MARSP56192 900 aaKnown RBP8.48□□□□□ -1.05
HMGXB4-208ENST00000498325 CSPP1Q1MSJ5 1256 aa8.48□□□□□ -1.05
HMGXB4-208ENST00000498325 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.48□□□□□ -1.05
HMGXB4-208ENST00000498325 CUL7Q14999 1698 aa8.48□□□□□ -1.05
HMGXB4-208ENST00000498325 MADDQ8WXG6 1647 aa8.47□□□□□ -1.05
HMGXB4-208ENST00000498325 SPINT1O43278 529 aa8.47□□□□□ -1.05
HMGXB4-208ENST00000498325 ARHGEF15O94989 841 aa8.47□□□□□ -1.05
HMGXB4-208ENST00000498325 KANK3Q6NY19 840 aa8.47□□□□□ -1.05
HMGXB4-208ENST00000498325 BARGINQ6ZT62 677 aa8.47□□□□□ -1.05
HMGXB4-208ENST00000498325 VWA5B2Q8N398 1253 aa8.47□□□□□ -1.05
HMGXB4-208ENST00000498325 PGPEP1Q9NXJ5 209 aa8.47□□□□□ -1.05
HMGXB4-208ENST00000498325 KIAA0586Q9BVV6 1533 aa8.47□□□□□ -1.05
HMGXB4-208ENST00000498325 UHRF1BP1LA0JNW5 1464 aa8.46□□□□□ -1.05
HMGXB4-208ENST00000498325 CDC14CA4D256 554 aa8.46□□□□□ -1.06
HMGXB4-208ENST00000498325 SLC35F4A4IF30 521 aa8.46□□□□□ -1.06
HMGXB4-208ENST00000498325 ITGA6P23229 1130 aa8.46□□□□□ -1.06
HMGXB4-208ENST00000498325 FOXK2Q01167 660 aa8.46□□□□□ -1.06
HMGXB4-208ENST00000498325 CBLBQ13191 982 aa8.46□□□□□ -1.06
HMGXB4-208ENST00000498325 SV2AQ7L0J3 742 aa8.46□□□□□ -1.06
HMGXB4-208ENST00000498325 SH3BP5LQ7L8J4 393 aa8.46□□□□□ -1.06
HMGXB4-208ENST00000498325 TNIKQ9UKE5 1360 aa8.46□□□□□ -1.06
HMGXB4-208ENST00000498325 NUTM2BA6NNL0 878 aaPredicted RBP8.45□□□□□ -1.06
HMGXB4-208ENST00000498325 NUTM2EB1AL46 878 aaPredicted RBP8.45□□□□□ -1.06
HMGXB4-208ENST00000498325 PPP1R26Q5T8A7 1209 aaPredicted RBP8.45□□□□□ -1.06
HMGXB4-208ENST00000498325 NUTM2DQ5VT03 806 aaPredicted RBP8.45□□□□□ -1.06
HMGXB4-208ENST00000498325 Q6ZVU0 165 aa8.45□□□□□ -1.06
HMGXB4-208ENST00000498325 NUTM2AQ8IVF1 878 aaPredicted RBP8.45□□□□□ -1.06
HMGXB4-208ENST00000498325 SCARF2Q96GP6 870 aaPredicted RBP8.45□□□□□ -1.06
HMGXB4-208ENST00000498325 CARD14Q9BXL6 1004 aa8.45□□□□□ -1.06
HMGXB4-208ENST00000498325 UACAQ9BZF9 1416 aa8.45□□□□□ -1.06
HMGXB4-208ENST00000498325 MAGI3Q5TCQ9 1506 aa8.44□□□□□ -1.06
HMGXB4-208ENST00000498325 KDM5BQ9UGL1 1544 aa8.44□□□□□ -1.06
HMGXB4-208ENST00000498325 CD109Q6YHK3 1445 aa8.44□□□□□ -1.06
HMGXB4-208ENST00000498325 BCORL1Q5H9F3 1711 aa8.43□□□□□ -1.06
HMGXB4-208ENST00000498325 ZMYND10O75800 440 aa8.43□□□□□ -1.06
HMGXB4-208ENST00000498325 PARP9Q8IXQ6 854 aa8.43□□□□□ -1.06
HMGXB4-208ENST00000498325 ERFEQ4G0M1 354 aa8.42□□□□□ -1.06
HMGXB4-208ENST00000498325 ARID4BQ4LE39 1312 aaPredicted RBP8.42□□□□□ -1.06
HMGXB4-208ENST00000498325 QPCTQ16769 361 aa8.41□□□□□ -1.06
HMGXB4-208ENST00000498325 HELBQ8NG08 1087 aaPredicted RBP8.41□□□□□ -1.06
HMGXB4-208ENST00000498325 GPKOWQ92917 476 aaPredicted RBP eCLIP8.41□□□□□ -1.06
HMGXB4-208ENST00000498325 RIMS1Q86UR5 1692 aaKnown RBP8.4□□□□□ -1.06
HMGXB4-208ENST00000498325 WDR7Q9Y4E6 1490 aa8.4□□□□□ -1.06
HMGXB4-208ENST00000498325 RAPGEF3O95398 923 aa8.4□□□□□ -1.06
HMGXB4-208ENST00000498325 ADAMTS2O95450 1211 aa8.4□□□□□ -1.06
HMGXB4-208ENST00000498325 CTSOP43234 321 aaPredicted RBP8.4□□□□□ -1.06
HMGXB4-208ENST00000498325 MAP3K10Q02779 954 aa8.4□□□□□ -1.06
HMGXB4-208ENST00000498325 ZCCHC11Q5TAX3 1644 aaKnown RBP8.4□□□□□ -1.07
HMGXB4-208ENST00000498325 ARAP3Q8WWN8 1544 aa8.39□□□□□ -1.07
HMGXB4-208ENST00000498325 KIF27Q86VH2 1401 aa8.39□□□□□ -1.07
HMGXB4-208ENST00000498325 DHX9Q08211 1270 aaKnown RBP8.39□□□□□ -1.07
HMGXB4-208ENST00000498325 AGBL1Q96MI9 1066 aa8.39□□□□□ -1.07
HMGXB4-208ENST00000498325 INSM2Q96T92 566 aaPredicted RBP8.39□□□□□ -1.07
HMGXB4-208ENST00000498325 LIMD1Q9UGP4 676 aa8.39□□□□□ -1.07
HMGXB4-208ENST00000498325 YEATS2Q9ULM3 1422 aa8.38□□□□□ -1.07
HMGXB4-208ENST00000498325 LILRB3O75022 631 aa8.38□□□□□ -1.07
HMGXB4-208ENST00000498325 RELBQ01201 579 aa8.38□□□□□ -1.07
HMGXB4-208ENST00000498325 LYPD4Q6UWN0 246 aa8.38□□□□□ -1.07
HMGXB4-208ENST00000498325 KCTD15Q96SI1 283 aaPredicted RBP8.38□□□□□ -1.07
HMGXB4-208ENST00000498325 POLMQ9NP87 494 aaPredicted RBP8.38□□□□□ -1.07
HMGXB4-208ENST00000498325 LTBP4Q8N2S1 1624 aa8.38□□□□□ -1.07
HMGXB4-208ENST00000498325 CARMIL2Q6F5E8 1435 aa8.37□□□□□ -1.07
HMGXB4-208ENST00000498325 MED1Q15648 1581 aaPredicted RBP8.37□□□□□ -1.07
HMGXB4-208ENST00000498325 SRSF11Q05519 484 aaKnown RBP8.37□□□□□ -1.07
HMGXB4-208ENST00000498325 TUSC1Q2TAM9 212 aa8.37□□□□□ -1.07
HMGXB4-208ENST00000498325 SLC10A4Q96EP9 437 aa8.37□□□□□ -1.07
HMGXB4-208ENST00000498325 CDV3Q9UKY7 258 aaKnown RBP8.37□□□□□ -1.07
HMGXB4-208ENST00000498325 STRCQ7RTU9 1775 aa8.36□□□□□ -1.07
HMGXB4-208ENST00000498325 MYSM1Q5VVJ2 828 aa8.36□□□□□ -1.07
HMGXB4-208ENST00000498325 VSIG10Q8N0Z9 540 aa8.36□□□□□ -1.07
HMGXB4-208ENST00000498325 RNF217Q8TC41 542 aa8.36□□□□□ -1.07
HMGXB4-208ENST00000498325 ZC3H15Q8WU90 426 aaKnown RBP8.36□□□□□ -1.07
HMGXB4-208ENST00000498325 ARHGAP9Q9BRR9 750 aa8.36□□□□□ -1.07
HMGXB4-208ENST00000498325 GOLGA3Q08378 1498 aa8.36□□□□□ -1.07
HMGXB4-208ENST00000498325 SENP3-EIF4A1A0A087X0R7 540 aa8.35□□□□□ -1.07
HMGXB4-208ENST00000498325 TRIM66O15016 1216 aa8.35□□□□□ -1.07
HMGXB4-208ENST00000498325 UBTFP17480 764 aaKnown RBP8.35□□□□□ -1.07
HMGXB4-208ENST00000498325 XP32Q5T750 250 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms