RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 PCDHGA4Q9Y5G9 962 aa5.86□□□□□ -1.47
SNRNP40-206ENST00000489853 KIF13AQ9H1H9 1805 aa5.85□□□□□ -1.47
SNRNP40-206ENST00000489853 GCC2Q8IWJ2 1684 aa5.85□□□□□ -1.47
SNRNP40-206ENST00000489853 MTUS2Q5JR59 1369 aa5.85□□□□□ -1.47
SNRNP40-206ENST00000489853 KIAA1107Q9UPP5 1409 aa5.85□□□□□ -1.47
SNRNP40-206ENST00000489853 TULP2O00295 520 aa5.85□□□□□ -1.47
SNRNP40-206ENST00000489853 PER1O15534 1290 aaPredicted RBP5.85□□□□□ -1.47
SNRNP40-206ENST00000489853 KCTD17Q8N5Z5 321 aa5.85□□□□□ -1.47
SNRNP40-206ENST00000489853 ANKRD7Q92527 254 aa5.85□□□□□ -1.47
SNRNP40-206ENST00000489853 RWDD1Q9H446 243 aaPredicted RBP5.85□□□□□ -1.47
SNRNP40-206ENST00000489853 YY1AP1Q9H869 796 aa5.85□□□□□ -1.47
SNRNP40-206ENST00000489853 PDZRN3Q9UPQ7 1066 aa5.85□□□□□ -1.47
SNRNP40-206ENST00000489853 AXIN2Q9Y2T1 843 aa5.85□□□□□ -1.47
SNRNP40-206ENST00000489853 ANKRD30AQ9BXX3 1397 aa5.85□□□□□ -1.47
SNRNP40-206ENST00000489853 KDM5CP41229 1560 aa5.84□□□□□ -1.47
SNRNP40-206ENST00000489853 RTEL1-TNFRSF6BF6WH68 1400 aa5.84□□□□□ -1.47
SNRNP40-206ENST00000489853 CLGNO14967 610 aa5.84□□□□□ -1.47
SNRNP40-206ENST00000489853 SLC34A2O95436 690 aa5.84□□□□□ -1.47
SNRNP40-206ENST00000489853 SLFN14P0C7P3 912 aa5.84□□□□□ -1.47
SNRNP40-206ENST00000489853 ZSCAN23Q3MJ62 389 aa5.84□□□□□ -1.47
SNRNP40-206ENST00000489853 MYSM1Q5VVJ2 828 aa5.84□□□□□ -1.47
SNRNP40-206ENST00000489853 CALCOCO1Q9P1Z2 691 aa5.84□□□□□ -1.47
SNRNP40-206ENST00000489853 BCCIPQ9P287 314 aaKnown RBP eCLIP5.84□□□□□ -1.47
SNRNP40-206ENST00000489853 ADAMTS8Q9UP79 889 aa5.84□□□□□ -1.47
SNRNP40-206ENST00000489853 MBD5Q9P267 1494 aa5.84□□□□□ -1.47
SNRNP40-206ENST00000489853 CEP170Q5SW79 1584 aa5.84□□□□□ -1.47
SNRNP40-206ENST00000489853 UHRF1BP1Q6BDS2 1440 aa5.84□□□□□ -1.47
SNRNP40-206ENST00000489853 TBC1D12O60347 775 aa5.84□□□□□ -1.48
SNRNP40-206ENST00000489853 BAG4O95429 457 aaKnown RBP5.84□□□□□ -1.48
SNRNP40-206ENST00000489853 EN1Q05925 392 aaPredicted RBP5.84□□□□□ -1.48
SNRNP40-206ENST00000489853 NGEFQ8N5V2 710 aa5.84□□□□□ -1.48
SNRNP40-206ENST00000489853 RETREG2Q8NC44 543 aa5.84□□□□□ -1.48
SNRNP40-206ENST00000489853 PIBF1Q8WXW3 757 aa5.84□□□□□ -1.48
SNRNP40-206ENST00000489853 CCDC97Q96F63 343 aaPredicted RBP5.84□□□□□ -1.48
SNRNP40-206ENST00000489853 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.84□□□□□ -1.48
SNRNP40-206ENST00000489853 BCL2L12Q9HB09 334 aa5.84□□□□□ -1.48
SNRNP40-206ENST00000489853 FAM217BQ9NTX9 383 aaPredicted RBP5.84□□□□□ -1.48
SNRNP40-206ENST00000489853 CHIC2Q9UKJ5 165 aa5.84□□□□□ -1.48
SNRNP40-206ENST00000489853 CARMIL1Q5VZK9 1371 aa5.83□□□□□ -1.48
SNRNP40-206ENST00000489853 BCAR3O75815 825 aa5.83□□□□□ -1.48
SNRNP40-206ENST00000489853 MFAP1P55081 439 aaKnown RBP5.83□□□□□ -1.48
SNRNP40-206ENST00000489853 NOLC1Q14978 699 aaKnown RBP eCLIP5.83□□□□□ -1.48
SNRNP40-206ENST00000489853 SYCP1Q15431 976 aa5.83□□□□□ -1.48
SNRNP40-206ENST00000489853 CREBRFQ8IUR6 639 aa5.83□□□□□ -1.48
SNRNP40-206ENST00000489853 TSC1Q92574 1164 aa5.83□□□□□ -1.48
SNRNP40-206ENST00000489853 CARD11Q9BXL7 1154 aa5.83□□□□□ -1.48
SNRNP40-206ENST00000489853 EFCC1Q9HA90 598 aa5.83□□□□□ -1.48
SNRNP40-206ENST00000489853 DIAPH3Q9NSV4 1193 aa5.83□□□□□ -1.48
SNRNP40-206ENST00000489853 SPTLC3Q9NUV7 552 aa5.83□□□□□ -1.48
SNRNP40-206ENST00000489853 GEMIN8Q9NWZ8 242 aaKnown RBP5.83□□□□□ -1.48
SNRNP40-206ENST00000489853 PLEKHH1Q9ULM0 1364 aa5.83□□□□□ -1.48
SNRNP40-206ENST00000489853 TCOF1Q13428 1488 aaKnown RBP5.83□□□□□ -1.48
SNRNP40-206ENST00000489853 NUP160Q12769 1436 aa5.83□□□□□ -1.48
SNRNP40-206ENST00000489853 ST20-MTHFSA0A0A6YYL1 179 aa5.82□□□□□ -1.48
SNRNP40-206ENST00000489853 RAD21O60216 631 aa5.82□□□□□ -1.48
SNRNP40-206ENST00000489853 IGSF3O75054 1194 aa5.82□□□□□ -1.48
SNRNP40-206ENST00000489853 PTMAP06454 111 aaKnown RBP5.82□□□□□ -1.48
SNRNP40-206ENST00000489853 AXDND1Q5T1B0 1012 aaPredicted RBP5.82□□□□□ -1.48
SNRNP40-206ENST00000489853 LRSAM1Q6UWE0 723 aa5.82□□□□□ -1.48
SNRNP40-206ENST00000489853 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.82□□□□□ -1.48
SNRNP40-206ENST00000489853 SHROOM2Q13796 1616 aa5.82□□□□□ -1.48
SNRNP40-206ENST00000489853 PBRM1Q86U86 1689 aa5.82□□□□□ -1.48
SNRNP40-206ENST00000489853 NKTRP30414 1462 aaKnown RBP5.82□□□□□ -1.48
SNRNP40-206ENST00000489853 E9PSI1 815 aa5.82□□□□□ -1.48
SNRNP40-206ENST00000489853 CTIFO43310 598 aaKnown RBP5.82□□□□□ -1.48
SNRNP40-206ENST00000489853 U2AF2P26368 475 aaKnown RBP eCLIP5.82□□□□□ -1.483e-6■■■□□ 17.9
SNRNP40-206ENST00000489853 PBX2P40425 430 aa5.82□□□□□ -1.48
SNRNP40-206ENST00000489853 IRF5Q13568 498 aa5.82□□□□□ -1.48
SNRNP40-206ENST00000489853 TERF2Q15554 542 aa5.82□□□□□ -1.48
SNRNP40-206ENST00000489853 CAVIN1Q6NZI2 390 aaKnown RBP5.82□□□□□ -1.48
SNRNP40-206ENST00000489853 METTL3Q86U44 580 aaKnown RBP5.82□□□□□ -1.48
SNRNP40-206ENST00000489853 JARID2Q92833 1246 aaPredicted RBP5.82□□□□□ -1.48
SNRNP40-206ENST00000489853 LMBRD1Q9NUN5 540 aa5.82□□□□□ -1.48
SNRNP40-206ENST00000489853 PCDHGA10Q9Y5H3 936 aa5.82□□□□□ -1.48
SNRNP40-206ENST00000489853 MORC2Q9Y6X9 1032 aaPredicted RBP5.82□□□□□ -1.48
SNRNP40-206ENST00000489853 EFCAB5A4FU69 1503 aa5.81□□□□□ -1.48
SNRNP40-206ENST00000489853 E9PCH4 1651 aa5.81□□□□□ -1.48
SNRNP40-206ENST00000489853 GRIN2AQ12879 1464 aa5.81□□□□□ -1.48
SNRNP40-206ENST00000489853 RALGAPBQ86X10 1494 aa5.81□□□□□ -1.48
SNRNP40-206ENST00000489853 ROCK1Q13464 1354 aa5.81□□□□□ -1.48
SNRNP40-206ENST00000489853 NPC1L1Q9UHC9 1359 aa5.81□□□□□ -1.48
SNRNP40-206ENST00000489853 ABCA10Q8WWZ4 1543 aa5.81□□□□□ -1.48
SNRNP40-206ENST00000489853 CAPN2P17655 700 aa5.81□□□□□ -1.48
SNRNP40-206ENST00000489853 SSFA2P28290 1259 aa5.81□□□□□ -1.48
SNRNP40-206ENST00000489853 NUCB2P80303 420 aa5.81□□□□□ -1.48
SNRNP40-206ENST00000489853 FKBP5Q13451 457 aaPredicted RBP5.81□□□□□ -1.48
SNRNP40-206ENST00000489853 WDR43Q15061 677 aaKnown RBP eCLIP5.81□□□□□ -1.48
SNRNP40-206ENST00000489853 CHMP4AQ9BY43 222 aa5.81□□□□□ -1.48
SNRNP40-206ENST00000489853 GDPD2Q9HCC8 539 aa5.81□□□□□ -1.48
SNRNP40-206ENST00000489853 LIMD1Q9UGP4 676 aa5.81□□□□□ -1.48
SNRNP40-206ENST00000489853 SERPINA10Q9UK55 444 aa5.81□□□□□ -1.48
SNRNP40-206ENST00000489853 PCDHB15Q9Y5E8 787 aa5.81□□□□□ -1.48
SNRNP40-206ENST00000489853 KDM6BO15054 1643 aa5.8□□□□□ -1.48
SNRNP40-206ENST00000489853 KIF14Q15058 1648 aa5.8□□□□□ -1.48
SNRNP40-206ENST00000489853 K7ELQ4 463 aaPredicted RBP5.8□□□□□ -1.48
SNRNP40-206ENST00000489853 RFC5P40937 340 aa5.8□□□□□ -1.48
SNRNP40-206ENST00000489853 CLK2P49760 499 aaKnown RBP5.8□□□□□ -1.48
SNRNP40-206ENST00000489853 CHAF1AQ13111 956 aaPredicted RBP5.8□□□□□ -1.48
SNRNP40-206ENST00000489853 UVSSAQ2YD98 709 aa5.8□□□□□ -1.48
SNRNP40-206ENST00000489853 DHX37Q8IY37 1157 aaKnown RBP5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms