RNA–Protein interactions for RNA: ENST00000487846.1

TNIK-213, Transcript of TRAF2 and NCK interacting kinase, humanhuman

TSL 4

Gene TNIK, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIK-213ENST00000487846 RETREG3Q86VR2 466 aa9.17□□□□□ -0.94
TNIK-213ENST00000487846 CEP126Q9P2H0 1117 aa9.17□□□□□ -0.94
TNIK-213ENST00000487846 FKBP4Q02790 459 aaKnown RBP eCLIP9.16□□□□□ -0.94
TNIK-213ENST00000487846 RAD51AP2Q09MP3 1159 aa9.16□□□□□ -0.94
TNIK-213ENST00000487846 OCLNQ16625 522 aa9.16□□□□□ -0.94
TNIK-213ENST00000487846 C9orf131Q5VYM1 1079 aa9.16□□□□□ -0.94
TNIK-213ENST00000487846 TINF2Q9BSI4 451 aa9.16□□□□□ -0.94
TNIK-213ENST00000487846 PRKAG2Q9UGJ0 569 aa9.16□□□□□ -0.94
TNIK-213ENST00000487846 NOD1Q9Y239 953 aa9.16□□□□□ -0.94
TNIK-213ENST00000487846 TLDC2A0PJX2 215 aa9.15□□□□□ -0.94
TNIK-213ENST00000487846 SLC10A3P09131 477 aa9.15□□□□□ -0.94
TNIK-213ENST00000487846 SLC4A3P48751 1232 aa9.15□□□□□ -0.94
TNIK-213ENST00000487846 SEC13P55735 322 aa9.15□□□□□ -0.94
TNIK-213ENST00000487846 GNL2Q13823 731 aaKnown RBP9.15□□□□□ -0.94
TNIK-213ENST00000487846 ZNF662Q6ZS27 426 aa9.15□□□□□ -0.94
TNIK-213ENST00000487846 NT5DC4Q86YG4 428 aa9.15□□□□□ -0.94
TNIK-213ENST00000487846 SIX5Q8N196 739 aa9.15□□□□□ -0.94
TNIK-213ENST00000487846 GTF3C2Q8WUA4 911 aaPredicted RBP9.15□□□□□ -0.94
TNIK-213ENST00000487846 TGIF2Q9GZN2 237 aa9.15□□□□□ -0.94
TNIK-213ENST00000487846 CCSER2Q9H7U1 834 aa9.15□□□□□ -0.94
TNIK-213ENST00000487846 METTL5Q9NRN9 209 aaKnown RBP9.15□□□□□ -0.94
TNIK-213ENST00000487846 HDGFP51858 240 aaKnown RBP9.14□□□□□ -0.95
TNIK-213ENST00000487846 CLDN10P78369 228 aa9.14□□□□□ -0.95
TNIK-213ENST00000487846 ARHGAP4P98171 946 aa9.14□□□□□ -0.95
TNIK-213ENST00000487846 LYPD8Q6UX82 237 aa9.14□□□□□ -0.95
TNIK-213ENST00000487846 TMEM87AQ8NBN3 555 aa9.14□□□□□ -0.95
TNIK-213ENST00000487846 MRS2Q9HD23 443 aa9.14□□□□□ -0.95
TNIK-213ENST00000487846 MARCH6O60337 910 aa9.13□□□□□ -0.95
TNIK-213ENST00000487846 FMNL1O95466 1100 aaPredicted RBP9.13□□□□□ -0.95
TNIK-213ENST00000487846 PPP4CP60510 307 aa9.13□□□□□ -0.95
TNIK-213ENST00000487846 XPCQ01831 940 aaPredicted RBP9.13□□□□□ -0.95
TNIK-213ENST00000487846 KCNH2Q12809 1159 aa9.13□□□□□ -0.95
TNIK-213ENST00000487846 NYAP1Q6ZVC0 841 aa9.13□□□□□ -0.95
TNIK-213ENST00000487846 CERS3Q8IU89 383 aa9.13□□□□□ -0.95
TNIK-213ENST00000487846 PHTF2Q8N3S3 785 aa9.13□□□□□ -0.95
TNIK-213ENST00000487846 PRIMPOLQ96LW4 560 aa9.13□□□□□ -0.95
TNIK-213ENST00000487846 CHIC2Q9UKJ5 165 aa9.13□□□□□ -0.95
TNIK-213ENST00000487846 GPSM3Q9Y4H4 160 aa9.13□□□□□ -0.95
TNIK-213ENST00000487846 P4HBP07237 508 aaKnown RBP9.12□□□□□ -0.95
TNIK-213ENST00000487846 ATP6V1AP38606 617 aa9.12□□□□□ -0.95
TNIK-213ENST00000487846 FUT2Q10981 343 aa9.12□□□□□ -0.95
TNIK-213ENST00000487846 ECM1Q16610 540 aa9.12□□□□□ -0.95
TNIK-213ENST00000487846 SYMPKQ92797 1274 aaKnown RBP9.12□□□□□ -0.95
TNIK-213ENST00000487846 PTCD1O75127 700 aaKnown RBP9.11□□□□□ -0.95
TNIK-213ENST00000487846 APLP1P51693 650 aa9.11□□□□□ -0.95
TNIK-213ENST00000487846 METTL16Q86W50 562 aaKnown RBP9.11□□□□□ -0.95
TNIK-213ENST00000487846 DHX38Q92620 1227 aaKnown RBP9.11□□□□□ -0.95
TNIK-213ENST00000487846 RNF34Q969K3 372 aa9.11□□□□□ -0.95
TNIK-213ENST00000487846 RBCK1Q9BYM8 510 aa9.11□□□□□ -0.95
TNIK-213ENST00000487846 DNMT3AQ9Y6K1 912 aaPredicted RBP9.11□□□□□ -0.95
TNIK-213ENST00000487846 GTF2F1P35269 517 aaKnown RBP eCLIP9.1□□□□□ -0.95
TNIK-213ENST00000487846 CCDC144BQ3MJ40 725 aa9.1□□□□□ -0.95
TNIK-213ENST00000487846 SOGA3Q5TF21 947 aa9.1□□□□□ -0.95
TNIK-213ENST00000487846 SDE2Q6IQ49 451 aa9.1□□□□□ -0.95
TNIK-213ENST00000487846 MICAL1Q8TDZ2 1067 aa9.1□□□□□ -0.95
TNIK-213ENST00000487846 CAPN10Q9HC96 672 aa9.1□□□□□ -0.95
TNIK-213ENST00000487846 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.1□□□□□ -0.95
TNIK-213ENST00000487846 RNF40O75150 1001 aa9.09□□□□□ -0.95
TNIK-213ENST00000487846 PTK2Q05397 1052 aa9.09□□□□□ -0.95
TNIK-213ENST00000487846 Q3C1V9 767 aa9.09□□□□□ -0.95
TNIK-213ENST00000487846 LDLRAD1Q5T700 205 aa9.09□□□□□ -0.95
TNIK-213ENST00000487846 ZNF775Q96BV0 537 aaPredicted RBP9.09□□□□□ -0.95
TNIK-213ENST00000487846 PCDHB9Q9Y5E1 797 aa9.09□□□□□ -0.95
TNIK-213ENST00000487846 DKK1O94907 266 aa9.08□□□□□ -0.96
TNIK-213ENST00000487846 TRAF7Q6Q0C0 670 aa9.08□□□□□ -0.96
TNIK-213ENST00000487846 METTL14Q9HCE5 456 aaKnown RBP9.08□□□□□ -0.96
TNIK-213ENST00000487846 SBNO2Q9Y2G9 1366 aa9.08□□□□□ -0.96
TNIK-213ENST00000487846 NDUFB5O43674 189 aa9.07□□□□□ -0.96
TNIK-213ENST00000487846 PRPF40AO75400 957 aaKnown RBP9.07□□□□□ -0.96
TNIK-213ENST00000487846 FAM13AO94988 1023 aa9.07□□□□□ -0.96
TNIK-213ENST00000487846 FANCCQ00597 558 aa9.07□□□□□ -0.96
TNIK-213ENST00000487846 KCNC4Q03721 635 aa9.07□□□□□ -0.96
TNIK-213ENST00000487846 FMR1Q06787 632 aaKnown RBP eCLIP9.07□□□□□ -0.96
TNIK-213ENST00000487846 TMC7Q7Z402 723 aa9.07□□□□□ -0.96
TNIK-213ENST00000487846 GMLQ99445 158 aa9.07□□□□□ -0.96
TNIK-213ENST00000487846 SEPT3Q9UH03 358 aa9.07□□□□□ -0.96
TNIK-213ENST00000487846 TREHO43280 583 aa9.06□□□□□ -0.96
TNIK-213ENST00000487846 SORBS3O60504 671 aa9.06□□□□□ -0.96
TNIK-213ENST00000487846 GTF2IP78347 998 aa9.06□□□□□ -0.96
TNIK-213ENST00000487846 EGFLAMQ63HQ2 1017 aa9.06□□□□□ -0.96
TNIK-213ENST00000487846 CCDC102BQ68D86 513 aa9.06□□□□□ -0.96
TNIK-213ENST00000487846 TMC4Q7Z404 712 aa9.06□□□□□ -0.96
TNIK-213ENST00000487846 GPKOWQ92917 476 aaPredicted RBP eCLIP9.06□□□□□ -0.96
TNIK-213ENST00000487846 IQSEC3Q9UPP2 1182 aaPredicted RBP9.06□□□□□ -0.96
TNIK-213ENST00000487846 TBX22Q9Y458 520 aa9.06□□□□□ -0.96
TNIK-213ENST00000487846 ZBTB7BO15156 539 aaPredicted RBP9.05□□□□□ -0.96
TNIK-213ENST00000487846 RAB11FIP3O75154 756 aa9.05□□□□□ -0.96
TNIK-213ENST00000487846 F12P00748 615 aaPredicted RBP9.05□□□□□ -0.96
TNIK-213ENST00000487846 LDHBP07195 334 aaKnown RBP9.05□□□□□ -0.96
TNIK-213ENST00000487846 CFHP08603 1231 aa9.05□□□□□ -0.96
TNIK-213ENST00000487846 IBSPP21815 317 aaPredicted RBP9.05□□□□□ -0.96
TNIK-213ENST00000487846 ZNF76P36508 570 aa9.05□□□□□ -0.96
TNIK-213ENST00000487846 IGBP1P78318 339 aa9.05□□□□□ -0.96
TNIK-213ENST00000487846 TJAP1Q5JTD0 557 aa9.05□□□□□ -0.96
TNIK-213ENST00000487846 CC2D2BQ6DHV5 1058 aa9.05□□□□□ -0.96
TNIK-213ENST00000487846 HELQQ8TDG4 1101 aa9.05□□□□□ -0.96
TNIK-213ENST00000487846 CITED4Q96RK1 184 aa9.05□□□□□ -0.96
TNIK-213ENST00000487846 MKNK1Q9BUB5 465 aa9.05□□□□□ -0.96
TNIK-213ENST00000487846 PARP2Q9UGN5 583 aa9.05□□□□□ -0.96
TNIK-213ENST00000487846 KIAA1024Q9UPX6 916 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms