RNA–Protein interactions for RNA: ENST00000487689.1

UBR3-211, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 3

Gene UBR3, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-211ENST00000487689 RAB15P59190 212 aa9.29□□□□□ -0.92
UBR3-211ENST00000487689 CTDSPL2Q05D32 466 aa9.29□□□□□ -0.92
UBR3-211ENST00000487689 KRTAP4-8Q9BYQ9 185 aa9.29□□□□□ -0.92
UBR3-211ENST00000487689 K7ELQ4 463 aaPredicted RBP9.28□□□□□ -0.92
UBR3-211ENST00000487689 RHOQP17081 205 aa9.28□□□□□ -0.92
UBR3-211ENST00000487689 ADD1P35611 737 aaKnown RBP9.28□□□□□ -0.92
UBR3-211ENST00000487689 PRICKLE2Q7Z3G6 844 aa9.28□□□□□ -0.92
UBR3-211ENST00000487689 KDF1Q8NAX2 398 aaPredicted RBP9.28□□□□□ -0.92
UBR3-211ENST00000487689 FOXR1Q6PIV2 292 aa9.27□□□□□ -0.93
UBR3-211ENST00000487689 TRIM22Q8IYM9 498 aa9.27□□□□□ -0.93
UBR3-211ENST00000487689 OCSTAMPQ9BR26 566 aa9.27□□□□□ -0.93
UBR3-211ENST00000487689 FAM117AQ9C073 453 aa9.27□□□□□ -0.93
UBR3-211ENST00000487689 LILRA1O75019 489 aa9.26□□□□□ -0.93
UBR3-211ENST00000487689 LRRN4Q8WUT4 740 aa9.26□□□□□ -0.93
UBR3-211ENST00000487689 ACDQ96AP0 544 aa9.26□□□□□ -0.93
UBR3-211ENST00000487689 GMCL1Q96IK5 515 aa9.26□□□□□ -0.93
UBR3-211ENST00000487689 AP1G2O75843 785 aa9.25□□□□□ -0.93
UBR3-211ENST00000487689 PTK2Q05397 1052 aa9.25□□□□□ -0.93
UBR3-211ENST00000487689 RIPOR1Q6ZS17 1223 aa9.25□□□□□ -0.93
UBR3-211ENST00000487689 ADAM32Q8TC27 787 aa9.25□□□□□ -0.93
UBR3-211ENST00000487689 ZC3H4Q9UPT8 1303 aaKnown RBP9.25□□□□□ -0.93
UBR3-211ENST00000487689 NR6A1Q15406 480 aa9.24□□□□□ -0.93
UBR3-211ENST00000487689 DBN1Q16643 649 aa9.24□□□□□ -0.93
UBR3-211ENST00000487689 NBPF20Q3BBV1 942 aa9.24□□□□□ -0.93
UBR3-211ENST00000487689 PCMTD1Q96MG8 357 aaPredicted RBP9.24□□□□□ -0.93
UBR3-211ENST00000487689 ERVH48-1M5A8F1 160 aa9.23□□□□□ -0.93
UBR3-211ENST00000487689 Q8N3U1 123 aa9.23□□□□□ -0.93
UBR3-211ENST00000487689 PROCA1Q8NCQ7 364 aaPredicted RBP9.23□□□□□ -0.93
UBR3-211ENST00000487689 BAG6P46379 1132 aa9.22□□□□□ -0.93
UBR3-211ENST00000487689 RNF144AP50876 292 aaPredicted RBP9.22□□□□□ -0.93
UBR3-211ENST00000487689 NEUROD2Q15784 382 aa9.22□□□□□ -0.93
UBR3-211ENST00000487689 GTPBP3Q969Y2 492 aaKnown RBP9.22□□□□□ -0.93
UBR3-211ENST00000487689 PPP2R2DQ66LE6 453 aa9.21□□□□□ -0.94
UBR3-211ENST00000487689 GPSM3Q9Y4H4 160 aa9.21□□□□□ -0.94
UBR3-211ENST00000487689 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.2□□□□□ -0.94
UBR3-211ENST00000487689 KRBA1A5PL33 1030 aa9.19□□□□□ -0.94
UBR3-211ENST00000487689 TRERF1Q96PN7 1200 aa9.19□□□□□ -0.94
UBR3-211ENST00000487689 GAS2L1Q99501 681 aaPredicted RBP9.19□□□□□ -0.94
UBR3-211ENST00000487689 CYLDQ9NQC7 956 aa9.19□□□□□ -0.94
UBR3-211ENST00000487689 LRRC4BQ9NT99 713 aa9.19□□□□□ -0.94
UBR3-211ENST00000487689 H7C1W4 665 aa9.18□□□□□ -0.94
UBR3-211ENST00000487689 OIP5O43482 229 aa9.18□□□□□ -0.94
UBR3-211ENST00000487689 FURINP09958 794 aa9.18□□□□□ -0.94
UBR3-211ENST00000487689 MX2P20592 715 aa9.18□□□□□ -0.94
UBR3-211ENST00000487689 SNRPNP63162 240 aaKnown RBP9.18□□□□□ -0.94
UBR3-211ENST00000487689 DZIP3Q86Y13 1208 aaKnown RBP9.18□□□□□ -0.94
UBR3-211ENST00000487689 PSMG3-AS1Q96PY0 264 aa9.18□□□□□ -0.94
UBR3-211ENST00000487689 DYRK1BQ9Y463 629 aa9.18□□□□□ -0.94
UBR3-211ENST00000487689 TRIM52Q96A61 297 aa9.17□□□□□ -0.94
UBR3-211ENST00000487689 GOPCQ9HD26 462 aa9.17□□□□□ -0.94
UBR3-211ENST00000487689 NSFL1CQ9UNZ2 370 aaKnown RBP9.17□□□□□ -0.94
UBR3-211ENST00000487689 ESPNB1AK53 854 aa9.16□□□□□ -0.94
UBR3-211ENST00000487689 MEN1O00255 615 aa9.16□□□□□ -0.94
UBR3-211ENST00000487689 USP17L8P0C7I0 530 aa9.16□□□□□ -0.94
UBR3-211ENST00000487689 POU4F2Q12837 409 aa9.15□□□□□ -0.94
UBR3-211ENST00000487689 TMEM259Q4ZIN3 620 aa9.15□□□□□ -0.94
UBR3-211ENST00000487689 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.14□□□□□ -0.95
UBR3-211ENST00000487689 ATP5J2-PTCD1G3V325 749 aa9.14□□□□□ -0.95
UBR3-211ENST00000487689 GPC1P35052 558 aa9.14□□□□□ -0.95
UBR3-211ENST00000487689 RFC5P40937 340 aa9.14□□□□□ -0.95
UBR3-211ENST00000487689 IL27Q8NEV9 243 aa9.14□□□□□ -0.95
UBR3-211ENST00000487689 OXCT2Q9BYC2 517 aaPredicted RBP9.13□□□□□ -0.95
UBR3-211ENST00000487689 MKL2Q9ULH7 1088 aa9.13□□□□□ -0.95
UBR3-211ENST00000487689 SHISA8B8ZZ34 492 aa9.12□□□□□ -0.95
UBR3-211ENST00000487689 COL8A1P27658 744 aa9.12□□□□□ -0.95
UBR3-211ENST00000487689 FBXO31Q5XUX0 539 aaPredicted RBP9.12□□□□□ -0.95
UBR3-211ENST00000487689 EPS8L1Q8TE68 723 aa9.12□□□□□ -0.95
UBR3-211ENST00000487689 KRTAP9-2Q9BYQ4 174 aa9.12□□□□□ -0.95
UBR3-211ENST00000487689 A0A1W2PRU2 124 aa9.11□□□□□ -0.95
UBR3-211ENST00000487689 MAP2K3P46734 347 aa9.11□□□□□ -0.95
UBR3-211ENST00000487689 SLC27A3Q5K4L6 730 aa9.11□□□□□ -0.95
UBR3-211ENST00000487689 ALYREFQ86V81 257 aaKnown RBP9.11□□□□□ -0.95
UBR3-211ENST00000487689 NUCKS1Q9H1E3 243 aaKnown RBP9.11□□□□□ -0.95
UBR3-211ENST00000487689 NBPF10Q6P3W6 841 aaKnown RBP9.1□□□□□ -0.95
UBR3-211ENST00000487689 SEPT12Q8IYM1 358 aa9.1□□□□□ -0.95
UBR3-211ENST00000487689 NBPF15Q8N660 670 aa9.1□□□□□ -0.95
UBR3-211ENST00000487689 RRAGCQ9HB90 399 aa9.1□□□□□ -0.95
UBR3-211ENST00000487689 KRTAP9-6A0A140TA67 174 aa9.09□□□□□ -0.95
UBR3-211ENST00000487689 C1orf229Q6ZS94 237 aaPredicted RBP9.09□□□□□ -0.95
UBR3-211ENST00000487689 APBB1O00213 710 aa9.08□□□□□ -0.96
UBR3-211ENST00000487689 NLRP3Q96P20 1036 aa9.08□□□□□ -0.96
UBR3-211ENST00000487689 GRIN2CQ14957 1233 aa9.07□□□□□ -0.96
UBR3-211ENST00000487689 ZNF592Q92610 1267 aa9.07□□□□□ -0.96
UBR3-211ENST00000487689 GRIP2Q9C0E4 1043 aa9.07□□□□□ -0.96
UBR3-211ENST00000487689 HMX1Q9NP08 348 aaPredicted RBP9.07□□□□□ -0.96
UBR3-211ENST00000487689 TIMMDC1Q9NPL8 285 aa9.07□□□□□ -0.96
UBR3-211ENST00000487689 F11P03951 625 aa9.06□□□□□ -0.96
UBR3-211ENST00000487689 KLRG1Q96E93 195 aa9.06□□□□□ -0.96
UBR3-211ENST00000487689 CFHR5Q9BXR6 569 aa9.06□□□□□ -0.96
UBR3-211ENST00000487689 SPATA31C2B4DYI2 1134 aa9.05□□□□□ -0.96
UBR3-211ENST00000487689 EDARADDQ8WWZ3 215 aa9.05□□□□□ -0.96
UBR3-211ENST00000487689 SUV39H2Q9H5I1 410 aa9.05□□□□□ -0.96
UBR3-211ENST00000487689 ZNF330Q9Y3S2 320 aaPredicted RBP9.05□□□□□ -0.96
UBR3-211ENST00000487689 WASLO00401 505 aaPredicted RBP9.04□□□□□ -0.96
UBR3-211ENST00000487689 GIGYF1O75420 1035 aaPredicted RBP9.04□□□□□ -0.96
UBR3-211ENST00000487689 THBS1P07996 1170 aa9.04□□□□□ -0.96
UBR3-211ENST00000487689 TPRNQ4KMQ1 711 aa9.04□□□□□ -0.96
UBR3-211ENST00000487689 C1QTNF9BB2RNN3 333 aa9.03□□□□□ -0.96
UBR3-211ENST00000487689 BRPF1P55201 1214 aaPredicted RBP9.03□□□□□ -0.96
UBR3-211ENST00000487689 WDR44Q5JSH3 913 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms