RNA–Protein interactions for RNA: ENST00000483941.1

SMAD9-204, Transcript of SMAD family member 9, humanhuman

TSL 3

Gene SMAD9, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-204ENST00000483941 U2AF1L5P0DN76 240 aaPredicted RBP18.5■□□□□ 0.55
SMAD9-204ENST00000483941 U2AF1Q01081 240 aaKnown RBP eCLIP18.5■□□□□ 0.55
SMAD9-204ENST00000483941 COL5A2P05997 1499 aaPredicted RBP18.5■□□□□ 0.55
SMAD9-204ENST00000483941 MAP2P11137 1827 aaKnown RBP18.49■□□□□ 0.55
SMAD9-204ENST00000483941 U2SURPO15042 1029 aaKnown RBP18.49■□□□□ 0.55
SMAD9-204ENST00000483941 FBLN1P23142 703 aa18.49■□□□□ 0.55
SMAD9-204ENST00000483941 IP6K1Q92551 441 aa18.49■□□□□ 0.55
SMAD9-204ENST00000483941 THRAP3Q9Y2W1 955 aaKnown RBP18.49■□□□□ 0.55
SMAD9-204ENST00000483941 FCHSD2O94868 740 aa18.48■□□□□ 0.55
SMAD9-204ENST00000483941 ARHGEF25Q86VW2 580 aa18.48■□□□□ 0.55
SMAD9-204ENST00000483941 COL3A1P02461 1466 aaPredicted RBP18.47■□□□□ 0.55
SMAD9-204ENST00000483941 HOXC9P31274 260 aa18.47■□□□□ 0.55
SMAD9-204ENST00000483941 IL13P35225 146 aa18.47■□□□□ 0.55
SMAD9-204ENST00000483941 RUNDC1Q96C34 613 aa18.46■□□□□ 0.55
SMAD9-204ENST00000483941 NFAT5O94916 1531 aa18.45■□□□□ 0.54
SMAD9-204ENST00000483941 NCBP3Q53F19 620 aaKnown RBP18.45■□□□□ 0.54
SMAD9-204ENST00000483941 HSP90AB2PQ58FF8 381 aa18.45■□□□□ 0.54
SMAD9-204ENST00000483941 CRB1P82279 1406 aa18.45■□□□□ 0.54
SMAD9-204ENST00000483941 ZBED9Q6R2W3 1325 aa18.45■□□□□ 0.54
SMAD9-204ENST00000483941 CHD4Q14839 1912 aa18.45■□□□□ 0.54
SMAD9-204ENST00000483941 EIF4A2Q14240 407 aaKnown RBP18.44■□□□□ 0.54
SMAD9-204ENST00000483941 ANO8Q9HCE9 1232 aaPredicted RBP18.44■□□□□ 0.54
SMAD9-204ENST00000483941 MAPK8IP3Q9UPT6 1336 aa18.43■□□□□ 0.54
SMAD9-204ENST00000483941 ABCC6O95255 1503 aa18.42■□□□□ 0.54
SMAD9-204ENST00000483941 ZBTB7CA1YPR0 619 aa18.41■□□□□ 0.54
SMAD9-204ENST00000483941 PLSCR1O15162 318 aa18.41■□□□□ 0.54
SMAD9-204ENST00000483941 ZNF784Q8NCA9 323 aaPredicted RBP18.39■□□□□ 0.53
SMAD9-204ENST00000483941 COL18A1P39060 1754 aa18.38■□□□□ 0.53
SMAD9-204ENST00000483941 ZBTB7AO95365 584 aa18.38■□□□□ 0.53
SMAD9-204ENST00000483941 DDB1Q16531 1140 aa18.37■□□□□ 0.53
SMAD9-204ENST00000483941 CCDC146Q8IYE0 955 aa18.37■□□□□ 0.53
SMAD9-204ENST00000483941 BCL11BQ9C0K0 894 aaPredicted RBP18.37■□□□□ 0.53
SMAD9-204ENST00000483941 PDGFDQ9GZP0 370 aaPredicted RBP18.37■□□□□ 0.53
SMAD9-204ENST00000483941 APAF1O14727 1248 aa18.36■□□□□ 0.53
SMAD9-204ENST00000483941 SULT6B1Q6IMI4 303 aa18.36■□□□□ 0.53
SMAD9-204ENST00000483941 RSPH6AQ9H0K4 717 aa18.36■□□□□ 0.53
SMAD9-204ENST00000483941 RGPD5Q99666 1765 aa18.35■□□□□ 0.53
SMAD9-204ENST00000483941 BCL9O00512 1426 aa18.35■□□□□ 0.53
SMAD9-204ENST00000483941 IGSF1Q8N6C5 1336 aa18.35■□□□□ 0.53
SMAD9-204ENST00000483941 PRKAR2BP31323 418 aa18.35■□□□□ 0.53
SMAD9-204ENST00000483941 PTGER2P43116 358 aa18.35■□□□□ 0.53
SMAD9-204ENST00000483941 ANKRD24Q8TF21 1146 aa18.35■□□□□ 0.53
SMAD9-204ENST00000483941 LTV1Q96GA3 475 aaPredicted RBP18.35■□□□□ 0.53
SMAD9-204ENST00000483941 PLEKHF1Q96S99 279 aa18.35■□□□□ 0.53
SMAD9-204ENST00000483941 LTN1O94822 1766 aa18.35■□□□□ 0.53
SMAD9-204ENST00000483941 GOLGB1Q14789 3259 aaKnown RBP18.34■□□□□ 0.53
SMAD9-204ENST00000483941 HMOX1P09601 288 aa18.34■□□□□ 0.53
SMAD9-204ENST00000483941 CCDC27Q2M243 656 aa18.34■□□□□ 0.53
SMAD9-204ENST00000483941 PTF1AQ7RTS3 328 aa18.34■□□□□ 0.53
SMAD9-204ENST00000483941 EYA1Q99502 592 aa18.34■□□□□ 0.53
SMAD9-204ENST00000483941 LMOD3Q0VAK6 560 aa18.33■□□□□ 0.52
SMAD9-204ENST00000483941 TOM1L2Q6ZVM7 507 aa18.33■□□□□ 0.52
SMAD9-204ENST00000483941 KDRP35968 1356 aa18.32■□□□□ 0.52
SMAD9-204ENST00000483941 NHSQ6T4R5 1651 aa18.32■□□□□ 0.52
SMAD9-204ENST00000483941 SENP3-EIF4A1A0A087X0R7 540 aa18.32■□□□□ 0.52
SMAD9-204ENST00000483941 CSB-PGBD3P0DP91 1061 aa18.32■□□□□ 0.52
SMAD9-204ENST00000483941 PROM2Q8N271 834 aa18.32■□□□□ 0.52
SMAD9-204ENST00000483941 FHDC1Q9C0D6 1143 aaPredicted RBP18.32■□□□□ 0.52
SMAD9-204ENST00000483941 STK32BQ9NY57 414 aa18.32■□□□□ 0.52
SMAD9-204ENST00000483941 ATF5Q9Y2D1 282 aaPredicted RBP18.32■□□□□ 0.52
SMAD9-204ENST00000483941 ERBB3P21860 1342 aa18.31■□□□□ 0.52
SMAD9-204ENST00000483941 WDR17Q8IZU2 1322 aa18.3■□□□□ 0.52
SMAD9-204ENST00000483941 TMPOP42166 694 aaKnown RBP18.3■□□□□ 0.52
SMAD9-204ENST00000483941 CALD1Q05682 793 aaKnown RBP18.3■□□□□ 0.52
SMAD9-204ENST00000483941 MARCH10Q8NA82 808 aaPredicted RBP18.3■□□□□ 0.52
SMAD9-204ENST00000483941 AXIN2Q9Y2T1 843 aa18.3■□□□□ 0.52
SMAD9-204ENST00000483941 CEP350Q5VT06 3117 aa18.3■□□□□ 0.52
SMAD9-204ENST00000483941 PAPPAQ13219 1627 aa18.3■□□□□ 0.52
SMAD9-204ENST00000483941 PLEKHG2Q9H7P9 1386 aa18.3■□□□□ 0.52
SMAD9-204ENST00000483941 NFE2L2Q16236 605 aa18.29■□□□□ 0.52
SMAD9-204ENST00000483941 GAS2L2Q8NHY3 880 aa18.29■□□□□ 0.52
SMAD9-204ENST00000483941 SYT17Q9BSW7 474 aa18.29■□□□□ 0.52
SMAD9-204ENST00000483941 CDCA7Q9BWT1 371 aaPredicted RBP18.29■□□□□ 0.52
SMAD9-204ENST00000483941 RIPK4P57078 832 aa18.28■□□□□ 0.52
SMAD9-204ENST00000483941 GOLGA2Q08379 1002 aa18.28■□□□□ 0.52
SMAD9-204ENST00000483941 SLC15A2Q16348 729 aa18.28■□□□□ 0.52
SMAD9-204ENST00000483941 TXNRD1Q16881 649 aa18.28■□□□□ 0.52
SMAD9-204ENST00000483941 WDR63Q8IWG1 891 aa18.28■□□□□ 0.52
SMAD9-204ENST00000483941 MTFR1LQ9H019 292 aa18.28■□□□□ 0.52
SMAD9-204ENST00000483941 SALL2Q9Y467 1007 aaPredicted RBP18.28■□□□□ 0.52
SMAD9-204ENST00000483941 TNS2Q63HR2 1409 aa18.27■□□□□ 0.52
SMAD9-204ENST00000483941 AMOTQ4VCS5 1084 aa18.27■□□□□ 0.52
SMAD9-204ENST00000483941 NBPF6Q5VWK0 638 aa18.27■□□□□ 0.52
SMAD9-204ENST00000483941 NBPF4Q96M43 638 aa18.27■□□□□ 0.52
SMAD9-204ENST00000483941 NLRP2Q9NX02 1062 aa18.27■□□□□ 0.52
SMAD9-204ENST00000483941 C1QTNF8P60827 252 aa18.26■□□□□ 0.51
SMAD9-204ENST00000483941 NEUROD2Q15784 382 aa18.26■□□□□ 0.51
SMAD9-204ENST00000483941 AEBP1Q8IUX7 1158 aa18.26■□□□□ 0.51
SMAD9-204ENST00000483941 WWC1Q8IX03 1113 aa18.26■□□□□ 0.51
SMAD9-204ENST00000483941 PLEKHO1Q53GL0 409 aaPredicted RBP18.25■□□□□ 0.51
SMAD9-204ENST00000483941 RAPGEF4Q8WZA2 1011 aa18.25■□□□□ 0.51
SMAD9-204ENST00000483941 SGIP1Q9BQI5 828 aa18.25■□□□□ 0.51
SMAD9-204ENST00000483941 BTAF1O14981 1849 aa18.25■□□□□ 0.51
SMAD9-204ENST00000483941 ZNF521Q96K83 1311 aa18.24■□□□□ 0.51
SMAD9-204ENST00000483941 E9PSI1 815 aa18.24■□□□□ 0.51
SMAD9-204ENST00000483941 HTATSF1O43719 755 aaKnown RBP18.24■□□□□ 0.51
SMAD9-204ENST00000483941 PHACTR3Q96KR7 559 aa18.24■□□□□ 0.51
SMAD9-204ENST00000483941 MAP3K5Q99683 1374 aa18.24■□□□□ 0.51
SMAD9-204ENST00000483941 NCAPD2Q15021 1401 aa18.23■□□□□ 0.51
SMAD9-204ENST00000483941 FAM208AQ9UK61 1670 aaKnown RBP18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms