RNA–Protein interactions for RNA: ENST00000478285.1

TDP2-203, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

TSL 2

Gene TDP2, Length 857 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-203ENST00000478285 GRIN2BQ13224 1484 aa11.2□□□□□ -0.62
TDP2-203ENST00000478285 KIF27Q86VH2 1401 aa11.2□□□□□ -0.62
TDP2-203ENST00000478285 RUSC2Q8N2Y8 1516 aa11.19□□□□□ -0.62
TDP2-203ENST00000478285 SEPT12Q8IYM1 358 aa11.19□□□□□ -0.62
TDP2-203ENST00000478285 PURBQ96QR8 312 aaKnown RBP11.19□□□□□ -0.62
TDP2-203ENST00000478285 ZNF330Q9Y3S2 320 aaPredicted RBP11.19□□□□□ -0.62
TDP2-203ENST00000478285 RAB15P59190 212 aa11.18□□□□□ -0.62
TDP2-203ENST00000478285 MCCD1P59942 119 aaPredicted RBP11.18□□□□□ -0.62
TDP2-203ENST00000478285 ZNF592Q92610 1267 aa11.18□□□□□ -0.62
TDP2-203ENST00000478285 ERICH3Q5RHP9 1530 aa11.18□□□□□ -0.62
TDP2-203ENST00000478285 LINC00528Q8N1L1 170 aa11.17□□□□□ -0.62
TDP2-203ENST00000478285 ERVH48-1M5A8F1 160 aa11.16□□□□□ -0.62
TDP2-203ENST00000478285 GIGYF1O75420 1035 aaPredicted RBP11.16□□□□□ -0.62
TDP2-203ENST00000478285 UPP2O95045 317 aa11.16□□□□□ -0.62
TDP2-203ENST00000478285 CBLBQ13191 982 aa11.16□□□□□ -0.62
TDP2-203ENST00000478285 IRF5Q13568 498 aa11.16□□□□□ -0.62
TDP2-203ENST00000478285 Q6ZVU0 165 aa11.16□□□□□ -0.62
TDP2-203ENST00000478285 FAM9AQ8IZU1 332 aaPredicted RBP11.16□□□□□ -0.62
TDP2-203ENST00000478285 GDPD2Q9HCC8 539 aa11.16□□□□□ -0.62
TDP2-203ENST00000478285 TMPRSS4Q9NRS4 437 aa11.16□□□□□ -0.62
TDP2-203ENST00000478285 MAGI1Q96QZ7 1491 aaPredicted RBP11.15□□□□□ -0.62
TDP2-203ENST00000478285 C6orf118Q5T5N4 469 aa11.15□□□□□ -0.62
TDP2-203ENST00000478285 BMP2P12643 396 aa11.14□□□□□ -0.63
TDP2-203ENST00000478285 ZNF784Q8NCA9 323 aaPredicted RBP11.14□□□□□ -0.63
TDP2-203ENST00000478285 TSEN34Q9BSV6 310 aaKnown RBP11.14□□□□□ -0.63
TDP2-203ENST00000478285 CTTNBP2Q8WZ74 1663 aa11.14□□□□□ -0.63
TDP2-203ENST00000478285 ABL2P42684 1182 aa11.12□□□□□ -0.63
TDP2-203ENST00000478285 RNF20Q5VTR2 975 aa11.11□□□□□ -0.63
TDP2-203ENST00000478285 CCDC125Q86Z20 511 aa11.11□□□□□ -0.63
TDP2-203ENST00000478285 SYNJ2O15056 1496 aa11.11□□□□□ -0.63
TDP2-203ENST00000478285 EEA1Q15075 1411 aa11.1□□□□□ -0.63
TDP2-203ENST00000478285 LILRA1O75019 489 aa11.1□□□□□ -0.63
TDP2-203ENST00000478285 TRIM52Q96A61 297 aa11.1□□□□□ -0.63
TDP2-203ENST00000478285 COG6Q9Y2V7 657 aa11.1□□□□□ -0.63
TDP2-203ENST00000478285 EIF4G2P78344 907 aaKnown RBP eCLIP11.09□□□□□ -0.63
TDP2-203ENST00000478285 FLIIQ13045 1269 aa11.09□□□□□ -0.63
TDP2-203ENST00000478285 FHAD1B1AJZ9 1412 aa11.09□□□□□ -0.63
TDP2-203ENST00000478285 ADD1P35611 737 aaKnown RBP11.08□□□□□ -0.64
TDP2-203ENST00000478285 VAC14Q08AM6 782 aa11.08□□□□□ -0.64
TDP2-203ENST00000478285 CYLDQ9NQC7 956 aa11.08□□□□□ -0.64
TDP2-203ENST00000478285 KIF21BO75037 1637 aa11.08□□□□□ -0.64
TDP2-203ENST00000478285 SOS2Q07890 1332 aaPredicted RBP11.08□□□□□ -0.64
TDP2-203ENST00000478285 GRIN2AQ12879 1464 aa11.07□□□□□ -0.64
TDP2-203ENST00000478285 SPINT1O43278 529 aa11.07□□□□□ -0.64
TDP2-203ENST00000478285 ADH1AP07327 375 aa11.07□□□□□ -0.64
TDP2-203ENST00000478285 WASHC4Q2M389 1173 aa11.07□□□□□ -0.64
TDP2-203ENST00000478285 AGBL1Q96MI9 1066 aa11.07□□□□□ -0.64
TDP2-203ENST00000478285 CEP126Q9P2H0 1117 aa11.07□□□□□ -0.64
TDP2-203ENST00000478285 SOBPA7XYQ1 873 aa11.06□□□□□ -0.64
TDP2-203ENST00000478285 RELBQ01201 579 aa11.06□□□□□ -0.64
TDP2-203ENST00000478285 CHMP7Q8WUX9 453 aaPredicted RBP11.06□□□□□ -0.64
TDP2-203ENST00000478285 CEP170Q5SW79 1584 aa11.06□□□□□ -0.64
TDP2-203ENST00000478285 IGF1RP08069 1367 aa11.05□□□□□ -0.64
TDP2-203ENST00000478285 MAN1A2O60476 641 aa11.05□□□□□ -0.64
TDP2-203ENST00000478285 CARMIL1Q5VZK9 1371 aa11.04□□□□□ -0.64
TDP2-203ENST00000478285 TERTO14746 1132 aaKnown RBP11.04□□□□□ -0.64
TDP2-203ENST00000478285 ERVK-9P63128 1117 aa11.04□□□□□ -0.64
TDP2-203ENST00000478285 NFX1Q12986 1120 aaKnown RBP11.04□□□□□ -0.64
TDP2-203ENST00000478285 TREML4Q6UXN2 200 aa11.04□□□□□ -0.64
TDP2-203ENST00000478285 POM121Q96HA1 1249 aa11.04□□□□□ -0.64
TDP2-203ENST00000478285 PCDHB11Q9Y5F2 797 aa11.04□□□□□ -0.64
TDP2-203ENST00000478285 RAPGEF2Q9Y4G8 1499 aa11.04□□□□□ -0.64
TDP2-203ENST00000478285 TTLL8A6PVC2 850 aa11.03□□□□□ -0.64
TDP2-203ENST00000478285 UBTFP17480 764 aaKnown RBP11.03□□□□□ -0.64
TDP2-203ENST00000478285 CC2D2BQ6DHV5 1058 aa11.03□□□□□ -0.64
TDP2-203ENST00000478285 KDF1Q8NAX2 398 aaPredicted RBP11.03□□□□□ -0.64
TDP2-203ENST00000478285 NXF1Q9UBU9 619 aaKnown RBP11.03□□□□□ -0.64
TDP2-203ENST00000478285 DNMT3LQ9UJW3 386 aa11.03□□□□□ -0.64
TDP2-203ENST00000478285 WFS1O76024 890 aa11.02□□□□□ -0.65
TDP2-203ENST00000478285 PTGIRP43119 386 aa11.02□□□□□ -0.65
TDP2-203ENST00000478285 LCE2AQ5TA79 106 aaPredicted RBP11.02□□□□□ -0.65
TDP2-203ENST00000478285 RAD21O60216 631 aa11.01□□□□□ -0.65
TDP2-203ENST00000478285 ZNF395Q9H8N7 513 aaPredicted RBP11.01□□□□□ -0.65
TDP2-203ENST00000478285 PRXQ9BXM0 1461 aa11□□□□□ -0.65
TDP2-203ENST00000478285 CLASP1Q7Z460 1538 aa11□□□□□ -0.65
TDP2-203ENST00000478285 SOX11P35716 441 aa11□□□□□ -0.65
TDP2-203ENST00000478285 SCTRP47872 440 aa11□□□□□ -0.65
TDP2-203ENST00000478285 WWC1Q8IX03 1113 aa11□□□□□ -0.65
TDP2-203ENST00000478285 NPAS3Q8IXF0 933 aa11□□□□□ -0.65
TDP2-203ENST00000478285 PHTF2Q8N3S3 785 aa11□□□□□ -0.65
TDP2-203ENST00000478285 CCDC85AQ96PX6 553 aaPredicted RBP11□□□□□ -0.65
TDP2-203ENST00000478285 INSM2Q96T92 566 aaPredicted RBP11□□□□□ -0.65
TDP2-203ENST00000478285 GOLGA3Q08378 1498 aa11□□□□□ -0.65
TDP2-203ENST00000478285 IQGAP2Q13576 1575 aa10.99□□□□□ -0.65
TDP2-203ENST00000478285 ATP5J2-PTCD1G3V325 749 aa10.99□□□□□ -0.65
TDP2-203ENST00000478285 CTSOP43234 321 aaPredicted RBP10.99□□□□□ -0.65
TDP2-203ENST00000478285 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.99□□□□□ -0.65
TDP2-203ENST00000478285 SLFNL1Q499Z3 407 aa10.98□□□□□ -0.65
TDP2-203ENST00000478285 POLMQ9NP87 494 aaPredicted RBP10.98□□□□□ -0.65
TDP2-203ENST00000478285 SEMA3FQ13275 785 aa10.97□□□□□ -0.65
TDP2-203ENST00000478285 RNF135Q8IUD6 432 aa10.97□□□□□ -0.65
TDP2-203ENST00000478285 NUP160Q12769 1436 aa10.96□□□□□ -0.65
TDP2-203ENST00000478285 FIGNL2A6NMB9 653 aa10.96□□□□□ -0.65
TDP2-203ENST00000478285 TRAK2O60296 914 aa10.96□□□□□ -0.65
TDP2-203ENST00000478285 CYP2U1Q7Z449 544 aa10.96□□□□□ -0.65
TDP2-203ENST00000478285 SLC16A10Q8TF71 515 aa10.96□□□□□ -0.65
TDP2-203ENST00000478285 CDCA7Q9BWT1 371 aaPredicted RBP10.96□□□□□ -0.65
TDP2-203ENST00000478285 OSBPL3Q9H4L5 887 aa10.96□□□□□ -0.65
TDP2-203ENST00000478285 H3BM21 787 aa10.95□□□□□ -0.66
TDP2-203ENST00000478285 VEGFBP49765 207 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms