RNA–Protein interactions for RNA: ENST00000478285.1

TDP2-203, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

TSL 2

Gene TDP2, Length 857 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-203ENST00000478285 AEBP2Q6ZN18 517 aaPredicted RBP30.96■■■□□ 2.55
TDP2-203ENST00000478285 CHIC1Q5VXU3 224 aa29.98■■■□□ 2.39
TDP2-203ENST00000478285 PHF23Q9BUL5 403 aaPredicted RBP26.33■■□□□ 1.81
TDP2-203ENST00000478285 SENP3Q9H4L4 574 aaPredicted RBP26.33■■□□□ 1.81
TDP2-203ENST00000478285 FOXD1Q16676 465 aa24.45■■□□□ 1.5
TDP2-203ENST00000478285 PLPPR3Q6T4P5 718 aa24.22■■□□□ 1.47
TDP2-203ENST00000478285 PPP6R1Q9UPN7 881 aa23.31■■□□□ 1.32
TDP2-203ENST00000478285 ADRA2BP18089 450 aa23.26■■□□□ 1.31
TDP2-203ENST00000478285 PIAS4Q8N2W9 510 aaPredicted RBP23■■□□□ 1.27
TDP2-203ENST00000478285 MSH5O43196 834 aa22.68■■□□□ 1.22
TDP2-203ENST00000478285 PPP4R3CPQ6ZMV5 832 aa21.31■■□□□ 1
TDP2-203ENST00000478285 SCAF1Q9H7N4 1312 aaKnown RBP21.29■■□□□ 1
TDP2-203ENST00000478285 MAPK8IP2Q13387 824 aaPredicted RBP21.18■□□□□ 0.98
TDP2-203ENST00000478285 POTEDQ86YR6 584 aa21.11■□□□□ 0.97
TDP2-203ENST00000478285 DMRT2Q9Y5R5 561 aa20.97■□□□□ 0.95
TDP2-203ENST00000478285 CNKSR2Q8WXI2 1034 aa20.78■□□□□ 0.92
TDP2-203ENST00000478285 NCBP3Q53F19 620 aaKnown RBP20.67■□□□□ 0.9
TDP2-203ENST00000478285 KCNA4P22459 653 aa20.5■□□□□ 0.87
TDP2-203ENST00000478285 HOXD11P31277 338 aaPredicted RBP20.44■□□□□ 0.86
TDP2-203ENST00000478285 RNF216Q9NWF9 866 aaPredicted RBP20.44■□□□□ 0.86
TDP2-203ENST00000478285 NPM3O75607 178 aaKnown RBP20.37■□□□□ 0.85
TDP2-203ENST00000478285 DCAF8L1A6NGE4 600 aa20.05■□□□□ 0.8
TDP2-203ENST00000478285 DNAJC5BQ9UF47 199 aa19.85■□□□□ 0.77
TDP2-203ENST00000478285 SLC4A1APQ9BWU0 796 aaKnown RBP19.47■□□□□ 0.71
TDP2-203ENST00000478285 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.45■□□□□ 0.71e-7■□□□□ 8.2
TDP2-203ENST00000478285 RNF39Q9H2S5 420 aa19.39■□□□□ 0.69
TDP2-203ENST00000478285 SLC4A2P04920 1241 aa19.3■□□□□ 0.68
TDP2-203ENST00000478285 C1QBPQ07021 282 aaKnown RBP19.15■□□□□ 0.66
TDP2-203ENST00000478285 U3KPZ7 1027 aaPredicted RBP19.12■□□□□ 0.65
TDP2-203ENST00000478285 CACNB1Q02641 598 aaPredicted RBP19.07■□□□□ 0.64
TDP2-203ENST00000478285 FOXD4L1Q9NU39 408 aa18.96■□□□□ 0.63
TDP2-203ENST00000478285 ZBTB22O15209 634 aa18.86■□□□□ 0.61
TDP2-203ENST00000478285 MYCNP04198 464 aaPredicted RBP18.84■□□□□ 0.61
TDP2-203ENST00000478285 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.79■□□□□ 0.6
TDP2-203ENST00000478285 HNRNPUL2Q1KMD3 747 aaKnown RBP18.79■□□□□ 0.6
TDP2-203ENST00000478285 SAMD1Q6SPF0 538 aaPredicted RBP18.71■□□□□ 0.59
TDP2-203ENST00000478285 APLP2Q06481 763 aa18.67■□□□□ 0.58
TDP2-203ENST00000478285 SPINK5Q9NQ38 1064 aaPredicted RBP18.66■□□□□ 0.58
TDP2-203ENST00000478285 CAPN15O75808 1086 aa18.59■□□□□ 0.57
TDP2-203ENST00000478285 EHMT2Q96KQ7 1210 aa18.59■□□□□ 0.57
TDP2-203ENST00000478285 CSRNP3Q8WYN3 585 aa18.52■□□□□ 0.56
TDP2-203ENST00000478285 ZNF219Q9P2Y4 722 aaPredicted RBP18.44■□□□□ 0.54
TDP2-203ENST00000478285 TRHP20396 242 aaPredicted RBP18.43■□□□□ 0.54
TDP2-203ENST00000478285 DSG3P32926 999 aa18.36■□□□□ 0.53
TDP2-203ENST00000478285 ATF5Q9Y2D1 282 aaPredicted RBP18.33■□□□□ 0.52
TDP2-203ENST00000478285 ATXN8OSP0DMR3 200 aa18.32■□□□□ 0.52
TDP2-203ENST00000478285 ABCB7O75027 752 aa18.22■□□□□ 0.51
TDP2-203ENST00000478285 POLA2Q14181 598 aa18.08■□□□□ 0.48
TDP2-203ENST00000478285 ZBTB12Q9Y330 459 aaPredicted RBP17.79■□□□□ 0.44
TDP2-203ENST00000478285 FBLN2P98095 1184 aa17.59■□□□□ 0.41
TDP2-203ENST00000478285 MKRN4PQ13434 485 aaPredicted RBP17.53■□□□□ 0.4
TDP2-203ENST00000478285 RBM42Q9BTD8 480 aaKnown RBP17.51■□□□□ 0.39
TDP2-203ENST00000478285 OSCARQ8IYS5 282 aa17.49■□□□□ 0.39
TDP2-203ENST00000478285 SPDYE2BA6NHP3 402 aa17.28■□□□□ 0.36
TDP2-203ENST00000478285 SPDYE6P0CI01 402 aa17.28■□□□□ 0.36
TDP2-203ENST00000478285 SPDYE2Q495Y8 402 aa17.28■□□□□ 0.36
TDP2-203ENST00000478285 AKT1S1Q96B36 256 aa17.24■□□□□ 0.35
TDP2-203ENST00000478285 ZNF692Q9BU19 519 aaPredicted RBP17.15■□□□□ 0.34
TDP2-203ENST00000478285 SSUH2Q9Y2M2 353 aa17.13■□□□□ 0.33
TDP2-203ENST00000478285 REM2Q8IYK8 340 aaPredicted RBP17.06■□□□□ 0.32
TDP2-203ENST00000478285 SPDYE4A6NLX3 237 aa17.01■□□□□ 0.31
TDP2-203ENST00000478285 PABPN1Q86U42 306 aaKnown RBP eCLIP16.92■□□□□ 0.3
TDP2-203ENST00000478285 PITPNM1O00562 1244 aa16.88■□□□□ 0.29
TDP2-203ENST00000478285 CHRDL2Q6WN34 429 aa16.88■□□□□ 0.29
TDP2-203ENST00000478285 SPDYE1Q8NFV5 336 aaPredicted RBP16.83■□□□□ 0.28
TDP2-203ENST00000478285 FKBP8Q14318 412 aa16.76■□□□□ 0.27
TDP2-203ENST00000478285 CLEC11AQ9Y240 323 aa16.75■□□□□ 0.27
TDP2-203ENST00000478285 PROM2Q8N271 834 aa16.71■□□□□ 0.27
TDP2-203ENST00000478285 POTEHQ6S545 545 aa16.66■□□□□ 0.26
TDP2-203ENST00000478285 FXR2P51116 673 aaKnown RBP eCLIP16.62■□□□□ 0.25
TDP2-203ENST00000478285 PIP4P2Q8N4L2 257 aa16.61■□□□□ 0.25
TDP2-203ENST00000478285 STAG3Q9UJ98 1225 aa16.6■□□□□ 0.25
TDP2-203ENST00000478285 PRR29P0C7W0 189 aa16.57■□□□□ 0.24
TDP2-203ENST00000478285 PRKAR2AP13861 404 aaKnown RBP16.44■□□□□ 0.22
TDP2-203ENST00000478285 CHADLQ6NUI6 762 aa16.37■□□□□ 0.21
TDP2-203ENST00000478285 CREBZFQ9NS37 354 aa16.31■□□□□ 0.2
TDP2-203ENST00000478285 FBXO3Q9UK99 471 aa16.25■□□□□ 0.19
TDP2-203ENST00000478285 FARP1Q9Y4F1 1045 aaPredicted RBP16.21■□□□□ 0.19
TDP2-203ENST00000478285 MIER1Q8N108 512 aa16.14■□□□□ 0.17
TDP2-203ENST00000478285 HAX1O00165 279 aa16.12■□□□□ 0.17
TDP2-203ENST00000478285 MNX1P50219 401 aaPredicted RBP16.11■□□□□ 0.17
TDP2-203ENST00000478285 PLEKHG5O94827 1062 aa16.1■□□□□ 0.17
TDP2-203ENST00000478285 PLCD3Q8N3E9 789 aa16.1■□□□□ 0.17
TDP2-203ENST00000478285 C19orf67A6NJJ6 358 aa16.06■□□□□ 0.16
TDP2-203ENST00000478285 VASPP50552 380 aaPredicted RBP16.04■□□□□ 0.16
TDP2-203ENST00000478285 NPM1P06748 294 aaKnown RBP eCLIP16.02■□□□□ 0.16
TDP2-203ENST00000478285 EVX2Q03828 476 aa15.98■□□□□ 0.15
TDP2-203ENST00000478285 CD44P16070 742 aaKnown RBP15.95■□□□□ 0.14
TDP2-203ENST00000478285 ZBTB47Q9UFB7 747 aaPredicted RBP15.95■□□□□ 0.14
TDP2-203ENST00000478285 SP7Q8TDD2 431 aaPredicted RBP15.9■□□□□ 0.14
TDP2-203ENST00000478285 NISCHQ9Y2I1 1504 aa15.87■□□□□ 0.13
TDP2-203ENST00000478285 PAK3O75914 559 aaPredicted RBP15.82■□□□□ 0.12
TDP2-203ENST00000478285 ZRANB1Q9UGI0 708 aa15.82■□□□□ 0.12
TDP2-203ENST00000478285 KLHL34Q8N239 644 aa15.8■□□□□ 0.12
TDP2-203ENST00000478285 NUBP1P53384 320 aa15.78■□□□□ 0.12
TDP2-203ENST00000478285 IFNLR1Q8IU57 520 aaPredicted RBP15.78■□□□□ 0.12
TDP2-203ENST00000478285 RASEFQ8IZ41 740 aa15.77■□□□□ 0.12
TDP2-203ENST00000478285 ZNF579Q8NAF0 562 aaKnown RBP15.76■□□□□ 0.11
TDP2-203ENST00000478285 TSPYL2Q9H2G4 693 aaPredicted RBP15.74■□□□□ 0.11
TDP2-203ENST00000478285 GABBR2O75899 941 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms