RNA–Protein interactions for RNA: ENST00000477342.1

PEX1-207, Transcript of peroxisomal biogenesis factor 1, humanhuman

TSL 2

Gene PEX1, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1-207ENST00000477342 LMOD1P29536 600 aaPredicted RBP9.97□□□□□ -0.81
PEX1-207ENST00000477342 ARID5BQ14865 1188 aa9.97□□□□□ -0.81
PEX1-207ENST00000477342 ZSCAN1Q8NBB4 408 aa9.97□□□□□ -0.81
PEX1-207ENST00000477342 KCTD15Q96SI1 283 aaPredicted RBP9.97□□□□□ -0.81
PEX1-207ENST00000477342 PLPP7Q8NBV4 271 aa9.96□□□□□ -0.82
PEX1-207ENST00000477342 USP17L5A8MUK1 530 aa9.95□□□□□ -0.82
PEX1-207ENST00000477342 NR5A1Q13285 461 aa9.95□□□□□ -0.82
PEX1-207ENST00000477342 VASH1Q7L8A9 365 aaPredicted RBP9.95□□□□□ -0.82
PEX1-207ENST00000477342 USP17L3A6NCW0 530 aa9.94□□□□□ -0.82
PEX1-207ENST00000477342 USP17L4A6NCW7 530 aa9.94□□□□□ -0.82
PEX1-207ENST00000477342 RFX1P22670 979 aa9.94□□□□□ -0.82
PEX1-207ENST00000477342 GRM5P41594 1212 aa9.94□□□□□ -0.82
PEX1-207ENST00000477342 SCARF1Q14162 830 aa9.94□□□□□ -0.82
PEX1-207ENST00000477342 USP17L2Q6R6M4 530 aa9.94□□□□□ -0.82
PEX1-207ENST00000477342 USP17L1Q7RTZ2 530 aa9.94□□□□□ -0.82
PEX1-207ENST00000477342 CCDC85AQ96PX6 553 aaPredicted RBP9.94□□□□□ -0.82
PEX1-207ENST00000477342 ZFAND3Q9H8U3 227 aa9.94□□□□□ -0.82
PEX1-207ENST00000477342 FAM181BA6NEQ2 426 aa9.93□□□□□ -0.82
PEX1-207ENST00000477342 KANK4Q5T7N3 995 aaPredicted RBP9.93□□□□□ -0.82
PEX1-207ENST00000477342 ACIN1Q9UKV3 1341 aaKnown RBP9.92□□□□□ -0.82
PEX1-207ENST00000477342 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.92□□□□□ -0.82
PEX1-207ENST00000477342 NR3C2P08235 984 aa9.92□□□□□ -0.82
PEX1-207ENST00000477342 TSGA10IPQ3SY00 556 aa9.92□□□□□ -0.82
PEX1-207ENST00000477342 INTS6LQ5JSJ4 861 aaKnown RBP9.92□□□□□ -0.82
PEX1-207ENST00000477342 VRTNQ9H8Y1 702 aa9.92□□□□□ -0.82
PEX1-207ENST00000477342 ZIC2O95409 532 aaPredicted RBP9.91□□□□□ -0.82
PEX1-207ENST00000477342 NCOA4Q13772 614 aa9.91□□□□□ -0.82
PEX1-207ENST00000477342 ITPKCQ96DU7 683 aa9.91□□□□□ -0.82
PEX1-207ENST00000477342 DOLKQ9UPQ8 538 aa9.91□□□□□ -0.82
PEX1-207ENST00000477342 DHX9Q08211 1270 aaKnown RBP9.9□□□□□ -0.82
PEX1-207ENST00000477342 EML3Q32P44 896 aa9.9□□□□□ -0.82
PEX1-207ENST00000477342 TRIM52Q96A61 297 aa9.9□□□□□ -0.82
PEX1-207ENST00000477342 ATG7O95352 703 aa9.89□□□□□ -0.83
PEX1-207ENST00000477342 MKRN1Q9UHC7 482 aaKnown RBP9.89□□□□□ -0.83
PEX1-207ENST00000477342 ATP5J2-PTCD1G3V325 749 aa9.88□□□□□ -0.83
PEX1-207ENST00000477342 ERVH48-1M5A8F1 160 aa9.88□□□□□ -0.83
PEX1-207ENST00000477342 USP4Q13107 963 aa9.88□□□□□ -0.83
PEX1-207ENST00000477342 C6orf118Q5T5N4 469 aa9.88□□□□□ -0.83
PEX1-207ENST00000477342 DEPDC4Q8N2C3 294 aa9.88□□□□□ -0.83
PEX1-207ENST00000477342 SIRT1Q96EB6 747 aa9.88□□□□□ -0.83
PEX1-207ENST00000477342 PCDHB11Q9Y5F2 797 aa9.88□□□□□ -0.83
PEX1-207ENST00000477342 VSIG8P0DPA2 414 aa9.87□□□□□ -0.83
PEX1-207ENST00000477342 FSHRP23945 695 aa9.87□□□□□ -0.83
PEX1-207ENST00000477342 ELOAQ14241 798 aaKnown RBP9.87□□□□□ -0.83
PEX1-207ENST00000477342 CDCA7Q9BWT1 371 aaPredicted RBP9.87□□□□□ -0.83
PEX1-207ENST00000477342 NOD1Q9Y239 953 aa9.87□□□□□ -0.83
PEX1-207ENST00000477342 TRIM50Q86XT4 487 aa9.86□□□□□ -0.83
PEX1-207ENST00000477342 CCDC116Q8IYX3 515 aa9.86□□□□□ -0.83
PEX1-207ENST00000477342 FAM196BA6NMK8 535 aa9.85□□□□□ -0.83
PEX1-207ENST00000477342 MAN1A2O60476 641 aa9.85□□□□□ -0.83
PEX1-207ENST00000477342 ATP1A2P50993 1020 aa9.84□□□□□ -0.83
PEX1-207ENST00000477342 ERVK-9P63128 1117 aa9.84□□□□□ -0.83
PEX1-207ENST00000477342 OXLD1Q5BKU9 147 aa9.84□□□□□ -0.83
PEX1-207ENST00000477342 RAB15P59190 212 aa9.83□□□□□ -0.84
PEX1-207ENST00000477342 PDE4CQ08493 712 aa9.83□□□□□ -0.84
PEX1-207ENST00000477342 CDCA8Q53HL2 280 aa9.83□□□□□ -0.84
PEX1-207ENST00000477342 LINC00528Q8N1L1 170 aa9.83□□□□□ -0.84
PEX1-207ENST00000477342 MEIOBQ8N635 442 aa9.83□□□□□ -0.84
PEX1-207ENST00000477342 EMILIN1Q9Y6C2 1016 aa9.83□□□□□ -0.84
PEX1-207ENST00000477342 BMP2P12643 396 aa9.82□□□□□ -0.84
PEX1-207ENST00000477342 RASA1P20936 1047 aa9.82□□□□□ -0.84
PEX1-207ENST00000477342 PTK7Q13308 1070 aa9.82□□□□□ -0.84
PEX1-207ENST00000477342 PPP1R26Q5T8A7 1209 aaPredicted RBP9.82□□□□□ -0.84
PEX1-207ENST00000477342 CC2D2BQ6DHV5 1058 aa9.82□□□□□ -0.84
PEX1-207ENST00000477342 LARP1Q6PKG0 1096 aaKnown RBP9.82□□□□□ -0.84
PEX1-207ENST00000477342 LARGE2Q8N3Y3 721 aa9.82□□□□□ -0.84
PEX1-207ENST00000477342 OGFOD1Q8N543 542 aa9.82□□□□□ -0.84
PEX1-207ENST00000477342 RETREG2Q8NC44 543 aa9.82□□□□□ -0.84
PEX1-207ENST00000477342 PCDHGA11Q9Y5H2 935 aa9.82□□□□□ -0.84
PEX1-207ENST00000477342 ZBTB7BO15156 539 aaPredicted RBP9.81□□□□□ -0.84
PEX1-207ENST00000477342 PPFIA3O75145 1194 aa9.81□□□□□ -0.84
PEX1-207ENST00000477342 MYCP01106 439 aaPredicted RBP9.81□□□□□ -0.84
PEX1-207ENST00000477342 CLDN10P78369 228 aa9.81□□□□□ -0.84
PEX1-207ENST00000477342 CRTC2Q53ET0 693 aaPredicted RBP9.81□□□□□ -0.84
PEX1-207ENST00000477342 TMPRSS4Q9NRS4 437 aa9.81□□□□□ -0.84
PEX1-207ENST00000477342 PGPEP1Q9NXJ5 209 aa9.81□□□□□ -0.84
PEX1-207ENST00000477342 USTQ9Y2C2 406 aa9.81□□□□□ -0.84
PEX1-207ENST00000477342 USP17L15C9J2P7 530 aa9.8□□□□□ -0.84
PEX1-207ENST00000477342 USP17L10C9JJH3 530 aa9.8□□□□□ -0.84
PEX1-207ENST00000477342 USP17L13C9JLJ4 530 aa9.8□□□□□ -0.84
PEX1-207ENST00000477342 USP17L12C9JPN9 530 aa9.8□□□□□ -0.84
PEX1-207ENST00000477342 USP17L11C9JVI0 530 aa9.8□□□□□ -0.84
PEX1-207ENST00000477342 USP17L21D6R901 530 aa9.8□□□□□ -0.84
PEX1-207ENST00000477342 USP17L18D6R9N7 530 aa9.8□□□□□ -0.84
PEX1-207ENST00000477342 USP17L22D6RA61 530 aa9.8□□□□□ -0.84
PEX1-207ENST00000477342 USP17L17D6RBQ6 530 aa9.8□□□□□ -0.84
PEX1-207ENST00000477342 USP17L19D6RCP7 530 aa9.8□□□□□ -0.84
PEX1-207ENST00000477342 USP17L20D6RJB6 530 aa9.8□□□□□ -0.84
PEX1-207ENST00000477342 LILRA1O75019 489 aa9.8□□□□□ -0.84
PEX1-207ENST00000477342 DKK1O94907 266 aa9.8□□□□□ -0.84
PEX1-207ENST00000477342 UPP2O95045 317 aa9.8□□□□□ -0.84
PEX1-207ENST00000477342 SCTRP47872 440 aa9.8□□□□□ -0.84
PEX1-207ENST00000477342 GTF2IP78347 998 aa9.8□□□□□ -0.84
PEX1-207ENST00000477342 USP17L24Q0WX57 530 aa9.8□□□□□ -0.84
PEX1-207ENST00000477342 SIX5Q8N196 739 aa9.8□□□□□ -0.84
PEX1-207ENST00000477342 ZNF784Q8NCA9 323 aaPredicted RBP9.8□□□□□ -0.84
PEX1-207ENST00000477342 DNAAF2Q9NVR5 837 aaKnown RBP9.8□□□□□ -0.84
PEX1-207ENST00000477342 DNMT3LQ9UJW3 386 aa9.8□□□□□ -0.84
PEX1-207ENST00000477342 SOS2Q07890 1332 aaPredicted RBP9.8□□□□□ -0.84
PEX1-207ENST00000477342 CSB-PGBD3P0DP91 1061 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms