RNA–Protein interactions for RNA: ENST00000477342.1

PEX1-207, Transcript of peroxisomal biogenesis factor 1, humanhuman

TSL 2

Gene PEX1, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1-207ENST00000477342 AEBP2Q6ZN18 517 aaPredicted RBP29.02■■■□□ 2.24
PEX1-207ENST00000477342 CHIC1Q5VXU3 224 aa27.43■■□□□ 1.98
PEX1-207ENST00000477342 SENP3Q9H4L4 574 aaPredicted RBP24.68■■□□□ 1.54
PEX1-207ENST00000477342 PHF23Q9BUL5 403 aaPredicted RBP24.39■■□□□ 1.49
PEX1-207ENST00000477342 FOXD1Q16676 465 aa23.07■■□□□ 1.28
PEX1-207ENST00000477342 PLPPR3Q6T4P5 718 aa21.86■■□□□ 1.09
PEX1-207ENST00000477342 MSH5O43196 834 aa21.55■■□□□ 1.04
PEX1-207ENST00000477342 PPP6R1Q9UPN7 881 aa21.54■■□□□ 1.04
PEX1-207ENST00000477342 PIAS4Q8N2W9 510 aaPredicted RBP21.51■■□□□ 1.03
PEX1-207ENST00000477342 ADRA2BP18089 450 aa21.46■■□□□ 1.03
PEX1-207ENST00000477342 POTEDQ86YR6 584 aa21.23■□□□□ 0.99
PEX1-207ENST00000477342 MAPK8IP2Q13387 824 aaPredicted RBP19.75■□□□□ 0.75
PEX1-207ENST00000477342 DMRT2Q9Y5R5 561 aa19.58■□□□□ 0.72
PEX1-207ENST00000477342 SCAF1Q9H7N4 1312 aaKnown RBP19.53■□□□□ 0.72
PEX1-207ENST00000477342 PPP4R3CPQ6ZMV5 832 aa19.18■□□□□ 0.66
PEX1-207ENST00000477342 HOXD11P31277 338 aaPredicted RBP18.83■□□□□ 0.6
PEX1-207ENST00000477342 CNKSR2Q8WXI2 1034 aa18.81■□□□□ 0.6
PEX1-207ENST00000477342 DCAF8L1A6NGE4 600 aa18.78■□□□□ 0.6
PEX1-207ENST00000477342 RNF216Q9NWF9 866 aaPredicted RBP18.66■□□□□ 0.58
PEX1-207ENST00000477342 CACNB1Q02641 598 aaPredicted RBP18.57■□□□□ 0.56
PEX1-207ENST00000477342 RNF39Q9H2S5 420 aa18.42■□□□□ 0.54
PEX1-207ENST00000477342 NCBP3Q53F19 620 aaKnown RBP18.36■□□□□ 0.53
PEX1-207ENST00000477342 NPM3O75607 178 aaKnown RBP18.17■□□□□ 0.5
PEX1-207ENST00000477342 DNAJC5BQ9UF47 199 aa18.15■□□□□ 0.5
PEX1-207ENST00000477342 C1QBPQ07021 282 aaKnown RBP18.12■□□□□ 0.49
PEX1-207ENST00000477342 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.93■□□□□ 0.46
PEX1-207ENST00000477342 KCNA4P22459 653 aa17.92■□□□□ 0.46
PEX1-207ENST00000477342 U3KPZ7 1027 aaPredicted RBP17.59■□□□□ 0.41
PEX1-207ENST00000477342 SLC4A2P04920 1241 aa17.39■□□□□ 0.37
PEX1-207ENST00000477342 SPINK5Q9NQ38 1064 aaPredicted RBP17.37■□□□□ 0.37
PEX1-207ENST00000477342 CAPN15O75808 1086 aa17.3■□□□□ 0.36
PEX1-207ENST00000477342 DSG3P32926 999 aa17.24■□□□□ 0.35
PEX1-207ENST00000477342 SLC4A1APQ9BWU0 796 aaKnown RBP17.13■□□□□ 0.33
PEX1-207ENST00000477342 TRHP20396 242 aaPredicted RBP17.02■□□□□ 0.32
PEX1-207ENST00000477342 APLP2Q06481 763 aa16.98■□□□□ 0.31
PEX1-207ENST00000477342 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.97■□□□□ 0.31
PEX1-207ENST00000477342 HNRNPUL2Q1KMD3 747 aaKnown RBP16.97■□□□□ 0.31
PEX1-207ENST00000477342 EHMT2Q96KQ7 1210 aa16.94■□□□□ 0.3
PEX1-207ENST00000477342 ZNF219Q9P2Y4 722 aaPredicted RBP16.94■□□□□ 0.3
PEX1-207ENST00000477342 ABCB7O75027 752 aa16.93■□□□□ 0.3
PEX1-207ENST00000477342 SAMD1Q6SPF0 538 aaPredicted RBP16.89■□□□□ 0.29
PEX1-207ENST00000477342 MYCNP04198 464 aaPredicted RBP16.76■□□□□ 0.27
PEX1-207ENST00000477342 CSRNP3Q8WYN3 585 aa16.7■□□□□ 0.26
PEX1-207ENST00000477342 POTEHQ6S545 545 aa16.6■□□□□ 0.25
PEX1-207ENST00000477342 FOXD4L1Q9NU39 408 aa16.56■□□□□ 0.24
PEX1-207ENST00000477342 POLA2Q14181 598 aa16.54■□□□□ 0.24
PEX1-207ENST00000477342 ZBTB22O15209 634 aa16.5■□□□□ 0.23
PEX1-207ENST00000477342 ATF5Q9Y2D1 282 aaPredicted RBP16.46■□□□□ 0.23
PEX1-207ENST00000477342 RBM42Q9BTD8 480 aaKnown RBP16.39■□□□□ 0.21
PEX1-207ENST00000477342 ZBTB12Q9Y330 459 aaPredicted RBP16.13■□□□□ 0.17
PEX1-207ENST00000477342 CHRDL2Q6WN34 429 aa16.1■□□□□ 0.17
PEX1-207ENST00000477342 ATXN8OSP0DMR3 200 aa16.06■□□□□ 0.16
PEX1-207ENST00000477342 OSCARQ8IYS5 282 aa16.03■□□□□ 0.16
PEX1-207ENST00000477342 AKT1S1Q96B36 256 aa16.02■□□□□ 0.16
PEX1-207ENST00000477342 REM2Q8IYK8 340 aaPredicted RBP15.89■□□□□ 0.13
PEX1-207ENST00000477342 PITPNM1O00562 1244 aa15.74■□□□□ 0.11
PEX1-207ENST00000477342 FBLN2P98095 1184 aa15.72■□□□□ 0.11
PEX1-207ENST00000477342 PIP4P2Q8N4L2 257 aa15.72■□□□□ 0.11
PEX1-207ENST00000477342 MKRN4PQ13434 485 aaPredicted RBP15.69■□□□□ 0.1
PEX1-207ENST00000477342 SPDYE2BA6NHP3 402 aa15.66■□□□□ 0.1
PEX1-207ENST00000477342 SPDYE6P0CI01 402 aa15.66■□□□□ 0.1
PEX1-207ENST00000477342 SPDYE2Q495Y8 402 aa15.66■□□□□ 0.1
PEX1-207ENST00000477342 FXR2P51116 673 aaKnown RBP eCLIP15.61■□□□□ 0.09
PEX1-207ENST00000477342 SP7Q8TDD2 431 aaPredicted RBP15.52■□□□□ 0.08
PEX1-207ENST00000477342 ZNF692Q9BU19 519 aaPredicted RBP15.48■□□□□ 0.07
PEX1-207ENST00000477342 SSUH2Q9Y2M2 353 aa15.47■□□□□ 0.07
PEX1-207ENST00000477342 HAX1O00165 279 aa15.44■□□□□ 0.06
PEX1-207ENST00000477342 CLEC11AQ9Y240 323 aa15.41■□□□□ 0.06
PEX1-207ENST00000477342 SPDYE1Q8NFV5 336 aaPredicted RBP15.4■□□□□ 0.06
PEX1-207ENST00000477342 PRKAR2AP13861 404 aaKnown RBP15.32■□□□□ 0.04
PEX1-207ENST00000477342 EVX2Q03828 476 aa15.31■□□□□ 0.04
PEX1-207ENST00000477342 PABPN1Q86U42 306 aaKnown RBP eCLIP15.26■□□□□ 0.03
PEX1-207ENST00000477342 CHADLQ6NUI6 762 aa15.17■□□□□ 0.02
PEX1-207ENST00000477342 PRR29P0C7W0 189 aa15.13■□□□□ 0.01
PEX1-207ENST00000477342 C19orf67A6NJJ6 358 aa15.11■□□□□ 0.01
PEX1-207ENST00000477342 FKBP8Q14318 412 aa15.02■□□□□ -0
PEX1-207ENST00000477342 GABBR2O75899 941 aa14.92□□□□□ -0.02
PEX1-207ENST00000477342 FARP1Q9Y4F1 1045 aaPredicted RBP14.89□□□□□ -0.03
PEX1-207ENST00000477342 SPDYE4A6NLX3 237 aa14.86□□□□□ -0.03
PEX1-207ENST00000477342 CD44P16070 742 aaKnown RBP14.82□□□□□ -0.04
PEX1-207ENST00000477342 STAG3Q9UJ98 1225 aa14.78□□□□□ -0.04
PEX1-207ENST00000477342 CREBZFQ9NS37 354 aa14.77□□□□□ -0.05
PEX1-207ENST00000477342 POTEIP0CG38 1075 aa14.64□□□□□ -0.07
PEX1-207ENST00000477342 PROM2Q8N271 834 aa14.63□□□□□ -0.07
PEX1-207ENST00000477342 ZRANB1Q9UGI0 708 aa14.6□□□□□ -0.07
PEX1-207ENST00000477342 ZNF579Q8NAF0 562 aaKnown RBP14.58□□□□□ -0.08
PEX1-207ENST00000477342 CLCN6P51797 869 aa14.56□□□□□ -0.08
PEX1-207ENST00000477342 LHX8Q68G74 356 aa14.56□□□□□ -0.08
PEX1-207ENST00000477342 MNX1P50219 401 aaPredicted RBP14.52□□□□□ -0.09
PEX1-207ENST00000477342 FBXO3Q9UK99 471 aa14.48□□□□□ -0.09
PEX1-207ENST00000477342 DCBLD2Q96PD2 775 aa14.46□□□□□ -0.09
PEX1-207ENST00000477342 GALR2O43603 387 aaPredicted RBP14.44□□□□□ -0.1
PEX1-207ENST00000477342 NPM1P06748 294 aaKnown RBP eCLIP14.44□□□□□ -0.1
PEX1-207ENST00000477342 PHF12Q96QT6 1004 aa14.42□□□□□ -0.1
PEX1-207ENST00000477342 PAK3O75914 559 aaPredicted RBP14.41□□□□□ -0.1
PEX1-207ENST00000477342 AMER1Q5JTC6 1135 aaPredicted RBP14.31□□□□□ -0.12
PEX1-207ENST00000477342 VASPP50552 380 aaPredicted RBP14.23□□□□□ -0.13
PEX1-207ENST00000477342 TSPYL2Q9H2G4 693 aaPredicted RBP14.23□□□□□ -0.13
PEX1-207ENST00000477342 MS4A3Q96HJ5 214 aa14.22□□□□□ -0.13
PEX1-207ENST00000477342 RTN4Q9NQC3 1192 aaKnown RBP14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms