RNA–Protein interactions for RNA: ENST00000475495.1

TRAIP-205, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 511 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-205ENST00000475495 KAT6BQ8WYB5 2073 aa13.63□□□□□ -0.23
TRAIP-205ENST00000475495 PPP2R1AP30153 589 aa13.62□□□□□ -0.23
TRAIP-205ENST00000475495 PDE3BQ13370 1112 aa13.62□□□□□ -0.23
TRAIP-205ENST00000475495 DDB1Q16531 1140 aa13.62□□□□□ -0.23
TRAIP-205ENST00000475495 CFAP53Q96M91 514 aa13.62□□□□□ -0.23
TRAIP-205ENST00000475495 DISP2A7MBM2 1401 aa13.62□□□□□ -0.23
TRAIP-205ENST00000475495 EXOC5O00471 708 aa13.61□□□□□ -0.23
TRAIP-205ENST00000475495 EYA1Q99502 592 aa13.61□□□□□ -0.23
TRAIP-205ENST00000475495 DIAPH1O60610 1272 aaKnown RBP13.6□□□□□ -0.23
TRAIP-205ENST00000475495 IL13P35225 146 aa13.6□□□□□ -0.23
TRAIP-205ENST00000475495 USHBP1Q8N6Y0 703 aa13.6□□□□□ -0.23
TRAIP-205ENST00000475495 RAPGEF4Q8WZA2 1011 aa13.6□□□□□ -0.23
TRAIP-205ENST00000475495 NCAPD2Q15021 1401 aa13.59□□□□□ -0.23
TRAIP-205ENST00000475495 LRRC37A3O60309 1634 aa13.59□□□□□ -0.23
TRAIP-205ENST00000475495 IGSF1Q8N6C5 1336 aa13.59□□□□□ -0.23
TRAIP-205ENST00000475495 TATP17735 454 aaPredicted RBP13.58□□□□□ -0.24
TRAIP-205ENST00000475495 UPF1Q92900 1129 aaKnown RBP eCLIP13.58□□□□□ -0.24
TRAIP-205ENST00000475495 RGPD1P0DJD0 1748 aa13.57□□□□□ -0.24
TRAIP-205ENST00000475495 FAM196AQ6ZSG2 479 aa13.57□□□□□ -0.24
TRAIP-205ENST00000475495 PRKRIP1Q9H875 184 aaPredicted RBP13.57□□□□□ -0.24
TRAIP-205ENST00000475495 MYBBP1AQ9BQG0 1328 aaKnown RBP13.57□□□□□ -0.24
TRAIP-205ENST00000475495 TNS2Q63HR2 1409 aa13.56□□□□□ -0.24
TRAIP-205ENST00000475495 ZCRB1Q8TBF4 217 aaKnown RBP13.56□□□□□ -0.24
TRAIP-205ENST00000475495 NUDCQ9Y266 331 aa13.56□□□□□ -0.24
TRAIP-205ENST00000475495 OVOS2A0A0G2JMS6 1433 aa13.56□□□□□ -0.24
TRAIP-205ENST00000475495 COL3A1P02461 1466 aaPredicted RBP13.55□□□□□ -0.24
TRAIP-205ENST00000475495 MEGF6O75095 1541 aa13.55□□□□□ -0.24
TRAIP-205ENST00000475495 PLEKHG2Q9H7P9 1386 aa13.55□□□□□ -0.24
TRAIP-205ENST00000475495 FAM182BQ5T319 152 aa13.54□□□□□ -0.24
TRAIP-205ENST00000475495 SULT6B1Q6IMI4 303 aa13.54□□□□□ -0.24
TRAIP-205ENST00000475495 CCDC125Q86Z20 511 aa13.54□□□□□ -0.24
TRAIP-205ENST00000475495 MARCH10Q8NA82 808 aaPredicted RBP13.54□□□□□ -0.24
TRAIP-205ENST00000475495 SPINK5Q9NQ38 1064 aaPredicted RBP13.54□□□□□ -0.24
TRAIP-205ENST00000475495 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.54□□□□□ -0.24
TRAIP-205ENST00000475495 SPG7Q9UQ90 795 aa13.54□□□□□ -0.24
TRAIP-205ENST00000475495 SBF2Q86WG5 1849 aa13.53□□□□□ -0.24
TRAIP-205ENST00000475495 U2SURPO15042 1029 aaKnown RBP13.53□□□□□ -0.24
TRAIP-205ENST00000475495 CAPN15O75808 1086 aa13.53□□□□□ -0.24
TRAIP-205ENST00000475495 KDRP35968 1356 aa13.53□□□□□ -0.24
TRAIP-205ENST00000475495 PKD1L3Q7Z443 1732 aa13.53□□□□□ -0.24
TRAIP-205ENST00000475495 DDX54Q8TDD1 881 aaKnown RBP13.52□□□□□ -0.25
TRAIP-205ENST00000475495 PCDH11XQ9BZA7 1347 aa13.52□□□□□ -0.25
TRAIP-205ENST00000475495 PCDH11YQ9BZA8 1340 aa13.52□□□□□ -0.25
TRAIP-205ENST00000475495 BCL9O00512 1426 aa13.52□□□□□ -0.25
TRAIP-205ENST00000475495 SHANK3Q9BYB0 1731 aa13.52□□□□□ -0.25
TRAIP-205ENST00000475495 SF3B2Q13435 895 aaKnown RBP13.51□□□□□ -0.25
TRAIP-205ENST00000475495 AMOTQ4VCS5 1084 aa13.51□□□□□ -0.25
TRAIP-205ENST00000475495 PLEKHO1Q53GL0 409 aaPredicted RBP13.51□□□□□ -0.25
TRAIP-205ENST00000475495 AEBP1Q8IUX7 1158 aa13.51□□□□□ -0.25
TRAIP-205ENST00000475495 HMOX1P09601 288 aa13.5□□□□□ -0.25
TRAIP-205ENST00000475495 U2AF1L5P0DN76 240 aaPredicted RBP13.5□□□□□ -0.25
TRAIP-205ENST00000475495 U2AF1Q01081 240 aaKnown RBP eCLIP13.5□□□□□ -0.25
TRAIP-205ENST00000475495 CYP27B1O15528 508 aa13.48□□□□□ -0.25
TRAIP-205ENST00000475495 FCHSD2O94868 740 aa13.48□□□□□ -0.25
TRAIP-205ENST00000475495 TRIM37O94972 964 aa13.48□□□□□ -0.25
TRAIP-205ENST00000475495 IFNL2Q8IZJ0 200 aa13.48□□□□□ -0.25
TRAIP-205ENST00000475495 DSG3P32926 999 aa13.47□□□□□ -0.25
TRAIP-205ENST00000475495 BCL11BQ9C0K0 894 aaPredicted RBP13.47□□□□□ -0.25
TRAIP-205ENST00000475495 PNNQ9H307 717 aaKnown RBP13.47□□□□□ -0.25
TRAIP-205ENST00000475495 HSP90AB1P08238 724 aaKnown RBP13.46□□□□□ -0.25
TRAIP-205ENST00000475495 NKX1-1Q15270 411 aaPredicted RBP13.46□□□□□ -0.25
TRAIP-205ENST00000475495 C1orf141Q5JVX7 400 aa13.46□□□□□ -0.25
TRAIP-205ENST00000475495 ZNF530Q6P9A1 599 aaPredicted RBP13.46□□□□□ -0.25
TRAIP-205ENST00000475495 RSPH6AQ9H0K4 717 aa13.46□□□□□ -0.25
TRAIP-205ENST00000475495 TNS1Q9HBL0 1735 aaKnown RBP13.45□□□□□ -0.26
TRAIP-205ENST00000475495 NEFMP07197 916 aa13.45□□□□□ -0.26
TRAIP-205ENST00000475495 PHKG2P15735 406 aa13.45□□□□□ -0.26
TRAIP-205ENST00000475495 BAG6P46379 1132 aa13.45□□□□□ -0.26
TRAIP-205ENST00000475495 NHSQ6T4R5 1651 aa13.44□□□□□ -0.26
TRAIP-205ENST00000475495 APBA3O96018 575 aa13.44□□□□□ -0.26
TRAIP-205ENST00000475495 PRKAR2BP31323 418 aa13.44□□□□□ -0.26
TRAIP-205ENST00000475495 WDR43Q15061 677 aaKnown RBP eCLIP13.44□□□□□ -0.26
TRAIP-205ENST00000475495 ACSBG1Q96GR2 724 aa13.44□□□□□ -0.26
TRAIP-205ENST00000475495 DOT1LQ8TEK3 1739 aa13.44□□□□□ -0.26
TRAIP-205ENST00000475495 ITGB4P16144 1822 aa13.43□□□□□ -0.26
TRAIP-205ENST00000475495 VIRMAQ69YN4 1812 aaKnown RBP13.43□□□□□ -0.26
TRAIP-205ENST00000475495 KCNQ2O43526 872 aa13.43□□□□□ -0.26
TRAIP-205ENST00000475495 AKAP4Q5JQC9 854 aa13.43□□□□□ -0.26
TRAIP-205ENST00000475495 GAS2L2Q8NHY3 880 aa13.43□□□□□ -0.26
TRAIP-205ENST00000475495 DCAF5Q96JK2 942 aa13.43□□□□□ -0.26
TRAIP-205ENST00000475495 BTAF1O14981 1849 aa13.42□□□□□ -0.26
TRAIP-205ENST00000475495 PRIM1P49642 420 aaKnown RBP13.42□□□□□ -0.26
TRAIP-205ENST00000475495 MTHFSDQ2M296 383 aaKnown RBP13.42□□□□□ -0.26
TRAIP-205ENST00000475495 SYTL4Q96C24 671 aaPredicted RBP13.42□□□□□ -0.26
TRAIP-205ENST00000475495 SCN11AQ9UI33 1791 aa13.41□□□□□ -0.26
TRAIP-205ENST00000475495 ERVV-2B6SEH9 535 aa13.41□□□□□ -0.26
TRAIP-205ENST00000475495 PLSCR1O15162 318 aa13.41□□□□□ -0.26
TRAIP-205ENST00000475495 PHACTR3Q96KR7 559 aa13.41□□□□□ -0.26
TRAIP-205ENST00000475495 SRCAPQ6ZRS2 3230 aa13.41□□□□□ -0.26
TRAIP-205ENST00000475495 PTF1AQ7RTS3 328 aa13.4□□□□□ -0.26
TRAIP-205ENST00000475495 DEFB132Q7Z7B7 95 aa13.4□□□□□ -0.26
TRAIP-205ENST00000475495 RGPD3A6NKT7 1758 aaPredicted RBP13.4□□□□□ -0.26
TRAIP-205ENST00000475495 RGPD4Q7Z3J3 1758 aa13.4□□□□□ -0.26
TRAIP-205ENST00000475495 TOGARAM1Q9Y4F4 1720 aa13.39□□□□□ -0.27
TRAIP-205ENST00000475495 GNAT3A8MTJ3 354 aa13.39□□□□□ -0.27
TRAIP-205ENST00000475495 EN1Q05925 392 aaPredicted RBP13.39□□□□□ -0.27
TRAIP-205ENST00000475495 SAMD1Q6SPF0 538 aaPredicted RBP13.39□□□□□ -0.27
TRAIP-205ENST00000475495 PLEKHF1Q96S99 279 aa13.39□□□□□ -0.27
TRAIP-205ENST00000475495 MRS2Q9HD23 443 aa13.39□□□□□ -0.27
TRAIP-205ENST00000475495 DLG5Q8TDM6 1919 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms