RNA–Protein interactions for RNA: ENST00000471572.6

NF1-208, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 2,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-208ENST00000471572 RNF34Q969K3 372 aa8.8□□□□□ -1
NF1-208ENST00000471572 GMLQ99445 158 aa8.8□□□□□ -1
NF1-208ENST00000471572 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.8□□□□□ -1
NF1-208ENST00000471572 GPSM3Q9Y4H4 160 aa8.8□□□□□ -1
NF1-208ENST00000471572 PCDHGA11Q9Y5H2 935 aa8.8□□□□□ -1
NF1-208ENST00000471572 IGHA2P01877 340 aa8.79□□□□□ -1
NF1-208ENST00000471572 LDHBP07195 334 aaKnown RBP8.79□□□□□ -1
NF1-208ENST00000471572 XPCQ01831 940 aaPredicted RBP8.79□□□□□ -1
NF1-208ENST00000471572 TSEN2Q8NCE0 465 aaKnown RBP8.79□□□□□ -1
NF1-208ENST00000471572 ADAM32Q8TC27 787 aa8.79□□□□□ -1
NF1-208ENST00000471572 SPACA7Q96KW9 195 aa8.79□□□□□ -1
NF1-208ENST00000471572 SETDB2Q96T68 719 aa8.79□□□□□ -1
NF1-208ENST00000471572 METTL5Q9NRN9 209 aaKnown RBP8.79□□□□□ -1
NF1-208ENST00000471572 NLRP2Q9NX02 1062 aa8.79□□□□□ -1
NF1-208ENST00000471572 DOLKQ9UPQ8 538 aa8.79□□□□□ -1
NF1-208ENST00000471572 NPR3P17342 541 aa8.78□□□□□ -1
NF1-208ENST00000471572 DNAJA1P31689 397 aaKnown RBP8.78□□□□□ -1
NF1-208ENST00000471572 HINFPQ9BQA5 517 aa8.78□□□□□ -1
NF1-208ENST00000471572 WWC3Q9ULE0 1092 aa8.78□□□□□ -1
NF1-208ENST00000471572 PTK2Q05397 1052 aa8.78□□□□□ -1
NF1-208ENST00000471572 PDXDC2PQ6P474 469 aa8.78□□□□□ -1
NF1-208ENST00000471572 PMFBP1Q8TBY8 1022 aa8.78□□□□□ -1
NF1-208ENST00000471572 ARMC5Q96C12 935 aa8.78□□□□□ -1
NF1-208ENST00000471572 PRPF40AO75400 957 aaKnown RBP8.77□□□□□ -1.01
NF1-208ENST00000471572 SLC39A7Q92504 469 aa8.77□□□□□ -1.01
NF1-208ENST00000471572 MRS2Q9HD23 443 aa8.77□□□□□ -1.01
NF1-208ENST00000471572 SORBS3O60504 671 aa8.76□□□□□ -1.01
NF1-208ENST00000471572 MPSTP25325 297 aa8.76□□□□□ -1.01
NF1-208ENST00000471572 MAPK8P45983 427 aa8.76□□□□□ -1.01
NF1-208ENST00000471572 MCCD1P59942 119 aaPredicted RBP8.76□□□□□ -1.01
NF1-208ENST00000471572 DAB2P98082 770 aa8.76□□□□□ -1.01
NF1-208ENST00000471572 ZNF76P36508 570 aa8.76□□□□□ -1.01
NF1-208ENST00000471572 RBL2Q08999 1139 aa8.76□□□□□ -1.01
NF1-208ENST00000471572 TCEAL1Q15170 157 aa8.76□□□□□ -1.01
NF1-208ENST00000471572 Q3C1V9 767 aa8.76□□□□□ -1.01
NF1-208ENST00000471572 PPP1R18Q6NYC8 613 aa8.76□□□□□ -1.01
NF1-208ENST00000471572 ZNF592Q92610 1267 aa8.76□□□□□ -1.01
NF1-208ENST00000471572 KCNK17Q96T54 332 aa8.76□□□□□ -1.01
NF1-208ENST00000471572 USB1Q9BQ65 265 aaKnown RBP8.76□□□□□ -1.01
NF1-208ENST00000471572 ZBED2Q9BTP6 218 aa8.76□□□□□ -1.01
NF1-208ENST00000471572 ZSWIM4Q9H7M6 989 aa8.76□□□□□ -1.01
NF1-208ENST00000471572 PTCD1O75127 700 aaKnown RBP8.75□□□□□ -1.01
NF1-208ENST00000471572 CTHP32929 405 aa8.75□□□□□ -1.01
NF1-208ENST00000471572 PSME1Q06323 249 aa8.75□□□□□ -1.01
NF1-208ENST00000471572 PTPRNQ16849 979 aa8.75□□□□□ -1.01
NF1-208ENST00000471572 SAMD7Q7Z3H4 446 aa8.75□□□□□ -1.01
NF1-208ENST00000471572 JAZF1Q86VZ6 243 aa8.75□□□□□ -1.01
NF1-208ENST00000471572 VTI1BQ9UEU0 232 aa8.75□□□□□ -1.01
NF1-208ENST00000471572 EHHADHQ08426 723 aa8.75□□□□□ -1.01
NF1-208ENST00000471572 METRNQ9UJH8 293 aa8.75□□□□□ -1.01
NF1-208ENST00000471572 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.75□□□□□ -1.01
NF1-208ENST00000471572 RBM19Q9Y4C8 960 aaKnown RBP8.75□□□□□ -1.01
NF1-208ENST00000471572 EMILIN1Q9Y6C2 1016 aa8.74□□□□□ -1.01
NF1-208ENST00000471572 GPR182O15218 404 aa8.73□□□□□ -1.01
NF1-208ENST00000471572 FAM13AO94988 1023 aa8.73□□□□□ -1.01
NF1-208ENST00000471572 CCDC87Q9NVE4 849 aa8.73□□□□□ -1.01
NF1-208ENST00000471572 KLHL42Q9P2K6 505 aa8.73□□□□□ -1.01
NF1-208ENST00000471572 PSDA5PKW4 1024 aaPredicted RBP8.73□□□□□ -1.01
NF1-208ENST00000471572 NDUFB5O43674 189 aa8.73□□□□□ -1.01
NF1-208ENST00000471572 DOK7Q18PE1 504 aa8.73□□□□□ -1.01
NF1-208ENST00000471572 PRKD2Q9BZL6 878 aa8.73□□□□□ -1.01
NF1-208ENST00000471572 RNF40O75150 1001 aa8.72□□□□□ -1.01
NF1-208ENST00000471572 PSMD2Q13200 908 aa8.72□□□□□ -1.01
NF1-208ENST00000471572 COL26A1Q96A83 441 aa8.72□□□□□ -1.01
NF1-208ENST00000471572 VTI1AQ96AJ9 217 aa8.72□□□□□ -1.01
NF1-208ENST00000471572 ZSWIM6Q9HCJ5 1215 aa8.72□□□□□ -1.01
NF1-208ENST00000471572 DMGDHQ9UI17 866 aaKnown RBP8.72□□□□□ -1.01
NF1-208ENST00000471572 PPME1Q9Y570 386 aa8.72□□□□□ -1.01
NF1-208ENST00000471572 ZNF746Q6NUN9 644 aaPredicted RBP8.71□□□□□ -1.01
NF1-208ENST00000471572 BRICD5Q6PL45 260 aa8.71□□□□□ -1.01
NF1-208ENST00000471572 PCDHGB7Q9Y5F8 929 aa8.71□□□□□ -1.01
NF1-208ENST00000471572 FZD6O60353 706 aa8.71□□□□□ -1.02
NF1-208ENST00000471572 GIGYF1O75420 1035 aaPredicted RBP8.71□□□□□ -1.02
NF1-208ENST00000471572 JUNDP17535 347 aa8.71□□□□□ -1.02
NF1-208ENST00000471572 RACK1P63244 317 aaKnown RBP8.71□□□□□ -1.02
NF1-208ENST00000471572 PTPROQ16827 1216 aa8.71□□□□□ -1.02
NF1-208ENST00000471572 ZNF394Q53GI3 561 aa8.71□□□□□ -1.02
NF1-208ENST00000471572 KCNB2Q92953 911 aa8.71□□□□□ -1.02
NF1-208ENST00000471572 SAP130Q9H0E3 1048 aa8.71□□□□□ -1.02
NF1-208ENST00000471572 HDGFP51858 240 aaKnown RBP8.7□□□□□ -1.02
NF1-208ENST00000471572 TMC1Q8TDI8 760 aa8.7□□□□□ -1.02
NF1-208ENST00000471572 GPKOWQ92917 476 aaPredicted RBP eCLIP8.7□□□□□ -1.02
NF1-208ENST00000471572 ARHGAP9Q9BRR9 750 aa8.7□□□□□ -1.02
NF1-208ENST00000471572 RABGEF1Q9UJ41 708 aa8.7□□□□□ -1.02
NF1-208ENST00000471572 SUGT1Q9Y2Z0 365 aa8.7□□□□□ -1.02
NF1-208ENST00000471572 ACTN4O43707 911 aaKnown RBP8.7□□□□□ -1.02
NF1-208ENST00000471572 PLCB3Q01970 1234 aa8.7□□□□□ -1.02
NF1-208ENST00000471572 PDE3BQ13370 1112 aa8.7□□□□□ -1.02
NF1-208ENST00000471572 OSBPL2Q9H1P3 480 aa8.7□□□□□ -1.02
NF1-208ENST00000471572 SLC52A1Q9NWF4 448 aa8.7□□□□□ -1.02
NF1-208ENST00000471572 SLC4A3P48751 1232 aa8.69□□□□□ -1.02
NF1-208ENST00000471572 ARID5AQ03989 594 aa8.69□□□□□ -1.02
NF1-208ENST00000471572 GNL2Q13823 731 aaKnown RBP8.69□□□□□ -1.02
NF1-208ENST00000471572 BMS1Q14692 1282 aaKnown RBP8.69□□□□□ -1.02
NF1-208ENST00000471572 FAM98CQ17RN3 349 aaKnown RBP8.69□□□□□ -1.02
NF1-208ENST00000471572 KMT5BQ4FZB7 885 aa8.69□□□□□ -1.02
NF1-208ENST00000471572 MCF2L2Q86YR7 1114 aa8.69□□□□□ -1.02
NF1-208ENST00000471572 FAM129BQ96TA1 746 aa8.69□□□□□ -1.02
NF1-208ENST00000471572 MRPL42Q9Y6G3 142 aaKnown RBP8.69□□□□□ -1.02
NF1-208ENST00000471572 CTSHP09668 335 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms