RNA–Protein interactions for RNA: ENST00000471297.1

SMNDC1-204, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 823 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-204ENST00000471297 MLECQ14165 292 aa8.48□□□□□ -1.05
SMNDC1-204ENST00000471297 TMEM132AQ24JP5 1023 aa8.48□□□□□ -1.05
SMNDC1-204ENST00000471297 GRIPAP1Q4V328 841 aa8.48□□□□□ -1.05
SMNDC1-204ENST00000471297 HIRIP3Q9BW71 556 aaPredicted RBP8.48□□□□□ -1.05
SMNDC1-204ENST00000471297 ARID4BQ4LE39 1312 aaPredicted RBP8.48□□□□□ -1.05
SMNDC1-204ENST00000471297 ROCK2O75116 1388 aaKnown RBP8.48□□□□□ -1.05
SMNDC1-204ENST00000471297 NDUFV2P19404 249 aa8.47□□□□□ -1.05
SMNDC1-204ENST00000471297 IDI1Q13907 227 aa8.47□□□□□ -1.05
SMNDC1-204ENST00000471297 GPRASP1Q5JY77 1395 aa8.47□□□□□ -1.05
SMNDC1-204ENST00000471297 USP47Q96K76 1375 aa8.47□□□□□ -1.05
SMNDC1-204ENST00000471297 KIF1BO60333 1816 aa8.46□□□□□ -1.06
SMNDC1-204ENST00000471297 MOXD2PA6NHM9 499 aa8.46□□□□□ -1.06
SMNDC1-204ENST00000471297 SKIV2LQ15477 1246 aaKnown RBP8.46□□□□□ -1.06
SMNDC1-204ENST00000471297 PUS10Q3MIT2 529 aaKnown RBP8.46□□□□□ -1.06
SMNDC1-204ENST00000471297 MYSM1Q5VVJ2 828 aa8.46□□□□□ -1.06
SMNDC1-204ENST00000471297 POLR3EQ9NVU0 708 aa8.46□□□□□ -1.06
SMNDC1-204ENST00000471297 PCDHB3Q9Y5E6 796 aa8.46□□□□□ -1.06
SMNDC1-204ENST00000471297 ZMYM3Q14202 1370 aa8.46□□□□□ -1.06
SMNDC1-204ENST00000471297 MYOM2P54296 1465 aa8.45□□□□□ -1.06
SMNDC1-204ENST00000471297 HOXA2O43364 376 aa8.45□□□□□ -1.06
SMNDC1-204ENST00000471297 DDX10Q13206 875 aaKnown RBP8.45□□□□□ -1.06
SMNDC1-204ENST00000471297 NBPF1Q3BBV0 1214 aa8.45□□□□□ -1.06
SMNDC1-204ENST00000471297 RIC3Q7Z5B4 369 aa8.45□□□□□ -1.06
SMNDC1-204ENST00000471297 ERVK-7P63135 1459 aa8.45□□□□□ -1.06
SMNDC1-204ENST00000471297 ADGRB3O60242 1522 aa8.44□□□□□ -1.06
SMNDC1-204ENST00000471297 SH3D19Q5HYK7 790 aa8.44□□□□□ -1.06
SMNDC1-204ENST00000471297 MORN1Q5T089 497 aa8.44□□□□□ -1.06
SMNDC1-204ENST00000471297 FBXO31Q5XUX0 539 aaPredicted RBP8.44□□□□□ -1.06
SMNDC1-204ENST00000471297 GOPCQ9HD26 462 aa8.44□□□□□ -1.06
SMNDC1-204ENST00000471297 SYNMO15061 1565 aa8.44□□□□□ -1.06
SMNDC1-204ENST00000471297 UGGT1Q9NYU2 1555 aa8.44□□□□□ -1.06
SMNDC1-204ENST00000471297 PIK3C2BO00750 1634 aa8.43□□□□□ -1.06
SMNDC1-204ENST00000471297 LAMC1P11047 1609 aa8.43□□□□□ -1.06
SMNDC1-204ENST00000471297 TRPM1Q7Z4N2 1603 aa8.43□□□□□ -1.06
SMNDC1-204ENST00000471297 SCUBE3Q8IX30 993 aa8.43□□□□□ -1.06
SMNDC1-204ENST00000471297 HLA-CQ95604 372 aa8.43□□□□□ -1.06
SMNDC1-204ENST00000471297 SPATA31D1Q6ZQQ2 1576 aa8.43□□□□□ -1.06
SMNDC1-204ENST00000471297 PREX1Q8TCU6 1659 aa8.43□□□□□ -1.06
SMNDC1-204ENST00000471297 SIGLEC1Q9BZZ2 1709 aa8.43□□□□□ -1.06
SMNDC1-204ENST00000471297 ST20-MTHFSA0A0A6YYL1 179 aa8.42□□□□□ -1.06
SMNDC1-204ENST00000471297 SPTLC1O15269 473 aa8.42□□□□□ -1.06
SMNDC1-204ENST00000471297 FDX1P10109 184 aa8.42□□□□□ -1.06
SMNDC1-204ENST00000471297 GUCA2AQ02747 115 aa8.42□□□□□ -1.06
SMNDC1-204ENST00000471297 RSBN1LQ6PCB5 846 aaPredicted RBP8.42□□□□□ -1.06
SMNDC1-204ENST00000471297 BLOC1S3Q6QNY0 202 aa8.42□□□□□ -1.06
SMNDC1-204ENST00000471297 PROCA1Q8NCQ7 364 aaPredicted RBP8.42□□□□□ -1.06
SMNDC1-204ENST00000471297 LIMD1Q9UGP4 676 aa8.42□□□□□ -1.06
SMNDC1-204ENST00000471297 SLC27A5Q9Y2P5 690 aa8.42□□□□□ -1.06
SMNDC1-204ENST00000471297 ADGRF5Q8IZF2 1346 aa8.42□□□□□ -1.06
SMNDC1-204ENST00000471297 CCDC7Q96M83 1385 aa8.42□□□□□ -1.06
SMNDC1-204ENST00000471297 ZFYVE9O95405 1425 aa8.42□□□□□ -1.06
SMNDC1-204ENST00000471297 NRXN1Q9ULB1 1477 aa8.42□□□□□ -1.06
SMNDC1-204ENST00000471297 MADDQ8WXG6 1647 aa8.42□□□□□ -1.06
SMNDC1-204ENST00000471297 CLTCQ00610 1675 aaKnown RBP8.42□□□□□ -1.06
SMNDC1-204ENST00000471297 WASHC2AQ641Q2 1341 aa8.41□□□□□ -1.06
SMNDC1-204ENST00000471297 GJA5P36382 358 aa8.41□□□□□ -1.06
SMNDC1-204ENST00000471297 CLK2P49760 499 aaKnown RBP8.41□□□□□ -1.06
SMNDC1-204ENST00000471297 COPS2P61201 443 aa8.41□□□□□ -1.06
SMNDC1-204ENST00000471297 PCMTD1Q96MG8 357 aaPredicted RBP8.41□□□□□ -1.06
SMNDC1-204ENST00000471297 C14orf93Q9H972 538 aaKnown RBP8.41□□□□□ -1.06
SMNDC1-204ENST00000471297 PCDHB15Q9Y5E8 787 aa8.41□□□□□ -1.06
SMNDC1-204ENST00000471297 KIAA1210Q9ULL0 1709 aa8.4□□□□□ -1.06
SMNDC1-204ENST00000471297 EIF3AQ14152 1382 aaKnown RBP8.4□□□□□ -1.06
SMNDC1-204ENST00000471297 KIF7Q2M1P5 1343 aa8.4□□□□□ -1.06
SMNDC1-204ENST00000471297 C11orf95C9JLR9 678 aaPredicted RBP8.4□□□□□ -1.06
SMNDC1-204ENST00000471297 ANP32CO43423 234 aa8.4□□□□□ -1.06
SMNDC1-204ENST00000471297 NR1I2O75469 434 aa8.4□□□□□ -1.06
SMNDC1-204ENST00000471297 TJAP1Q5JTD0 557 aa8.4□□□□□ -1.06
SMNDC1-204ENST00000471297 CFAP70Q5T0N1 1121 aa8.4□□□□□ -1.06
SMNDC1-204ENST00000471297 MTRQ99707 1265 aa8.4□□□□□ -1.06
SMNDC1-204ENST00000471297 PCDHGC3Q9UN70 934 aa8.4□□□□□ -1.06
SMNDC1-204ENST00000471297 CFAP65Q6ZU64 1925 aaKnown RBP8.4□□□□□ -1.06
SMNDC1-204ENST00000471297 SCAF11Q99590 1463 aaKnown RBP8.39□□□□□ -1.07
SMNDC1-204ENST00000471297 TNRQ92752 1358 aa8.39□□□□□ -1.07
SMNDC1-204ENST00000471297 CSPP1Q1MSJ5 1256 aa8.39□□□□□ -1.07
SMNDC1-204ENST00000471297 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.39□□□□□ -1.07
SMNDC1-204ENST00000471297 IFT172Q9UG01 1749 aa8.39□□□□□ -1.07
SMNDC1-204ENST00000471297 MROH2AA6NES4 1674 aa8.39□□□□□ -1.07
SMNDC1-204ENST00000471297 PIK3C2GO75747 1445 aa8.38□□□□□ -1.07
SMNDC1-204ENST00000471297 PPLO60437 1756 aa8.38□□□□□ -1.07
SMNDC1-204ENST00000471297 TMF1P82094 1093 aa8.38□□□□□ -1.07
SMNDC1-204ENST00000471297 TUSC1Q2TAM9 212 aa8.38□□□□□ -1.07
SMNDC1-204ENST00000471297 CDCA8Q53HL2 280 aa8.38□□□□□ -1.07
SMNDC1-204ENST00000471297 ZNF516Q92618 1163 aa8.38□□□□□ -1.07
SMNDC1-204ENST00000471297 IL21Q9HBE4 155 aa8.38□□□□□ -1.07
SMNDC1-204ENST00000471297 TMEM131LA2VDJ0 1609 aa8.38□□□□□ -1.07
SMNDC1-204ENST00000471297 NEXMIFQ5QGS0 1516 aa8.38□□□□□ -1.07
SMNDC1-204ENST00000471297 SETBP1Q9Y6X0 1596 aa8.37□□□□□ -1.07
SMNDC1-204ENST00000471297 ZPR1O75312 459 aa8.37□□□□□ -1.07
SMNDC1-204ENST00000471297 Q3C1V9 767 aa8.37□□□□□ -1.07
SMNDC1-204ENST00000471297 SYMPKQ92797 1274 aaKnown RBP8.37□□□□□ -1.07
SMNDC1-204ENST00000471297 TESK2Q96S53 571 aa8.37□□□□□ -1.07
SMNDC1-204ENST00000471297 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.37□□□□□ -1.07
SMNDC1-204ENST00000471297 SALL2Q9Y467 1007 aaPredicted RBP8.37□□□□□ -1.07
SMNDC1-204ENST00000471297 A2ML1A8K2U0 1454 aa8.37□□□□□ -1.07
SMNDC1-204ENST00000471297 C6orf229H3BNL8 230 aa8.36□□□□□ -1.07
SMNDC1-204ENST00000471297 BRICD5Q6PL45 260 aa8.36□□□□□ -1.07
SMNDC1-204ENST00000471297 NLRP1Q9C000 1473 aa8.36□□□□□ -1.07
SMNDC1-204ENST00000471297 POLR1AO95602 1720 aaPredicted RBP8.35□□□□□ -1.07
SMNDC1-204ENST00000471297 NUTM2BA6NNL0 878 aaPredicted RBP8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms