RNA–Protein interactions for RNA: ENST00000463328.5

TRA2B-207, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 2,780 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-207ENST00000463328 C9orf131Q5VYM1 1079 aa6.81□□□□□ -1.32
TRA2B-207ENST00000463328 ZKSCAN2Q63HK3 967 aa6.81□□□□□ -1.32
TRA2B-207ENST00000463328 AMOTL1Q8IY63 956 aa6.81□□□□□ -1.32
TRA2B-207ENST00000463328 HELBQ8NG08 1087 aaPredicted RBP6.81□□□□□ -1.32
TRA2B-207ENST00000463328 STAG1Q8WVM7 1258 aa6.81□□□□□ -1.32
TRA2B-207ENST00000463328 DHX38Q92620 1227 aaKnown RBP6.81□□□□□ -1.32
TRA2B-207ENST00000463328 CCDC102AQ96A19 550 aa6.81□□□□□ -1.32
TRA2B-207ENST00000463328 SPHKAPQ2M3C7 1700 aa6.81□□□□□ -1.32
TRA2B-207ENST00000463328 A2MP01023 1474 aa6.81□□□□□ -1.32
TRA2B-207ENST00000463328 LIG1P18858 919 aa6.81□□□□□ -1.32
TRA2B-207ENST00000463328 CYB5RLQ6IPT4 315 aa6.81□□□□□ -1.32
TRA2B-207ENST00000463328 RPUSD2Q8IZ73 545 aaKnown RBP6.81□□□□□ -1.32
TRA2B-207ENST00000463328 FBXO9Q9UK97 447 aaPredicted RBP6.81□□□□□ -1.32
TRA2B-207ENST00000463328 RNF17Q9BXT8 1623 aaKnown RBP6.81□□□□□ -1.32
TRA2B-207ENST00000463328 HMGB1P1B2RPK0 211 aaPredicted RBP6.8□□□□□ -1.32
TRA2B-207ENST00000463328 STK10O94804 968 aaKnown RBP6.8□□□□□ -1.32
TRA2B-207ENST00000463328 TBX4P57082 545 aa6.8□□□□□ -1.32
TRA2B-207ENST00000463328 MPNDQ8N594 471 aa6.8□□□□□ -1.32
TRA2B-207ENST00000463328 KIDINS220Q9ULH0 1771 aa6.8□□□□□ -1.32
TRA2B-207ENST00000463328 SCP2P22307 547 aa6.8□□□□□ -1.32
TRA2B-207ENST00000463328 LMOD3Q0VAK6 560 aa6.8□□□□□ -1.32
TRA2B-207ENST00000463328 AMHR2Q16671 573 aa6.8□□□□□ -1.32
TRA2B-207ENST00000463328 CASC1Q6TDU7 716 aa6.8□□□□□ -1.32
TRA2B-207ENST00000463328 PROCA1Q8NCQ7 364 aaPredicted RBP6.8□□□□□ -1.32
TRA2B-207ENST00000463328 GDPD2Q9HCC8 539 aa6.8□□□□□ -1.32
TRA2B-207ENST00000463328 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.8□□□□□ -1.327e-7■■■□□ 17.3
TRA2B-207ENST00000463328 MAP3K20Q9NYL2 800 aaKnown RBP6.8□□□□□ -1.32
TRA2B-207ENST00000463328 HDAC5Q9UQL6 1122 aa6.8□□□□□ -1.32
TRA2B-207ENST00000463328 RIMBP3CA6NJZ7 1639 aa6.8□□□□□ -1.32
TRA2B-207ENST00000463328 RIMBP3BA6NNM3 1639 aa6.8□□□□□ -1.32
TRA2B-207ENST00000463328 RIMBP3Q9UFD9 1639 aa6.8□□□□□ -1.32
TRA2B-207ENST00000463328 VGFO15240 615 aaPredicted RBP6.8□□□□□ -1.32
TRA2B-207ENST00000463328 HOXA2O43364 376 aa6.8□□□□□ -1.32
TRA2B-207ENST00000463328 CNGB1Q14028 1251 aaPredicted RBP6.8□□□□□ -1.32
TRA2B-207ENST00000463328 MROH1Q8NDA8 1641 aa6.8□□□□□ -1.32
TRA2B-207ENST00000463328 ADAMTS19Q8TE59 1207 aa6.8□□□□□ -1.32
TRA2B-207ENST00000463328 DCAF11Q8TEB1 546 aa6.8□□□□□ -1.32
TRA2B-207ENST00000463328 RPS6KC1Q96S38 1066 aa6.8□□□□□ -1.32
TRA2B-207ENST00000463328 WASHC2CQ9Y4E1 1318 aa6.8□□□□□ -1.32
TRA2B-207ENST00000463328 KIF3BO15066 747 aa6.79□□□□□ -1.32
TRA2B-207ENST00000463328 SEMA3FQ13275 785 aa6.79□□□□□ -1.32
TRA2B-207ENST00000463328 PLEKHG6Q3KR16 790 aa6.79□□□□□ -1.32
TRA2B-207ENST00000463328 HSP90AB2PQ58FF8 381 aa6.79□□□□□ -1.32
TRA2B-207ENST00000463328 CCDC85AQ96PX6 553 aaPredicted RBP6.79□□□□□ -1.32
TRA2B-207ENST00000463328 CARD11Q9BXL7 1154 aa6.79□□□□□ -1.32
TRA2B-207ENST00000463328 CSPP1Q1MSJ5 1256 aa6.79□□□□□ -1.32
TRA2B-207ENST00000463328 IRF2BPLQ9H1B7 796 aa6.79□□□□□ -1.32
TRA2B-207ENST00000463328 FBXO31Q5XUX0 539 aaPredicted RBP6.78□□□□□ -1.32
TRA2B-207ENST00000463328 DDX46Q7L014 1031 aaKnown RBP6.78□□□□□ -1.32
TRA2B-207ENST00000463328 MAP3K4Q9Y6R4 1608 aa6.78□□□□□ -1.32
TRA2B-207ENST00000463328 NOP58Q9Y2X3 529 aaKnown RBP6.78□□□□□ -1.32
TRA2B-207ENST00000463328 SUPT16HQ9Y5B9 1047 aaKnown RBP6.78□□□□□ -1.32
TRA2B-207ENST00000463328 MADDQ8WXG6 1647 aa6.77□□□□□ -1.33
TRA2B-207ENST00000463328 HECW2Q9P2P5 1572 aa6.77□□□□□ -1.33
TRA2B-207ENST00000463328 BIRC2Q13490 618 aa6.77□□□□□ -1.33
TRA2B-207ENST00000463328 NBPF20Q3BBV1 942 aa6.77□□□□□ -1.33
TRA2B-207ENST00000463328 REPIN1Q9BWE0 567 aaKnown RBP6.77□□□□□ -1.33
TRA2B-207ENST00000463328 WWC3Q9ULE0 1092 aa6.77□□□□□ -1.33
TRA2B-207ENST00000463328 INSRP06213 1382 aa6.77□□□□□ -1.33
TRA2B-207ENST00000463328 KLF15Q9UIH9 416 aa6.77□□□□□ -1.33
TRA2B-207ENST00000463328 TPX2Q9ULW0 747 aaKnown RBP6.77□□□□□ -1.33
TRA2B-207ENST00000463328 IQGAP1P46940 1657 aa6.77□□□□□ -1.33
TRA2B-207ENST00000463328 EFCAB6Q5THR3 1501 aa6.76□□□□□ -1.33
TRA2B-207ENST00000463328 IRF6O14896 467 aa6.76□□□□□ -1.33
TRA2B-207ENST00000463328 ERCC5P28715 1186 aaPredicted RBP6.76□□□□□ -1.33
TRA2B-207ENST00000463328 CLTCL1P53675 1640 aa6.76□□□□□ -1.33
TRA2B-207ENST00000463328 ZMYM4Q5VZL5 1548 aa6.76□□□□□ -1.33
TRA2B-207ENST00000463328 MYOM2P54296 1465 aa6.76□□□□□ -1.33
TRA2B-207ENST00000463328 FAM69CQ0P6D2 419 aa6.76□□□□□ -1.33
TRA2B-207ENST00000463328 JAZF1Q86VZ6 243 aa6.76□□□□□ -1.33
TRA2B-207ENST00000463328 PNISRQ8TF01 805 aaKnown RBP6.76□□□□□ -1.33
TRA2B-207ENST00000463328 SENP7Q9BQF6 1050 aa6.76□□□□□ -1.33
TRA2B-207ENST00000463328 TANGO6Q9C0B7 1094 aa6.76□□□□□ -1.33
TRA2B-207ENST00000463328 CTDP1Q9Y5B0 961 aaPredicted RBP6.76□□□□□ -1.33
TRA2B-207ENST00000463328 IFT172Q9UG01 1749 aa6.76□□□□□ -1.33
TRA2B-207ENST00000463328 KIF1BO60333 1816 aa6.76□□□□□ -1.33
TRA2B-207ENST00000463328 COL17A1Q9UMD9 1497 aaPredicted RBP6.76□□□□□ -1.33
TRA2B-207ENST00000463328 ST20-MTHFSA0A0A6YYL1 179 aa6.75□□□□□ -1.33
TRA2B-207ENST00000463328 SPDYE2BA6NHP3 402 aa6.75□□□□□ -1.33
TRA2B-207ENST00000463328 SPDYE5A6NIY4 337 aa6.75□□□□□ -1.33
TRA2B-207ENST00000463328 SPDYE6P0CI01 402 aa6.75□□□□□ -1.33
TRA2B-207ENST00000463328 CALRP27797 417 aaKnown RBP6.75□□□□□ -1.33
TRA2B-207ENST00000463328 SPDYE2Q495Y8 402 aa6.75□□□□□ -1.33
TRA2B-207ENST00000463328 QTRT2Q9H974 415 aaKnown RBP6.75□□□□□ -1.33
TRA2B-207ENST00000463328 DMGDHQ9UI17 866 aaKnown RBP6.75□□□□□ -1.33
TRA2B-207ENST00000463328 IQSEC3Q9UPP2 1182 aaPredicted RBP6.75□□□□□ -1.33
TRA2B-207ENST00000463328 FRMD4BQ9Y2L6 1034 aa6.75□□□□□ -1.33
TRA2B-207ENST00000463328 TSNAXIP1Q2TAA8 658 aa6.75□□□□□ -1.33
TRA2B-207ENST00000463328 EGFL6Q8IUX8 553 aa6.75□□□□□ -1.33
TRA2B-207ENST00000463328 FMNL3Q8IVF7 1028 aa6.75□□□□□ -1.33
TRA2B-207ENST00000463328 MKRN1Q9UHC7 482 aaKnown RBP6.75□□□□□ -1.33
TRA2B-207ENST00000463328 ZBED9Q6R2W3 1325 aa6.75□□□□□ -1.33
TRA2B-207ENST00000463328 VAMP1P23763 118 aa6.74□□□□□ -1.33
TRA2B-207ENST00000463328 BMS1Q14692 1282 aaKnown RBP6.74□□□□□ -1.33
TRA2B-207ENST00000463328 PHLDB3Q6NSJ2 640 aa6.74□□□□□ -1.33
TRA2B-207ENST00000463328 TTC30BQ8N4P2 665 aa6.74□□□□□ -1.33
TRA2B-207ENST00000463328 TESK2Q96S53 571 aa6.74□□□□□ -1.33
TRA2B-207ENST00000463328 PDZRN3Q9UPQ7 1066 aa6.74□□□□□ -1.33
TRA2B-207ENST00000463328 BRD4O60885 1362 aaPredicted RBP6.74□□□□□ -1.33
TRA2B-207ENST00000463328 NRXN1Q9ULB1 1477 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms