RNA–Protein interactions for RNA: ENST00000453040.5

CHL1-208, Transcript of cell adhesion molecule L1 like, humanhuman

TSL 2

Gene CHL1, Length 3,960 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1-208ENST00000453040 HDAC5Q9UQL6 1122 aa13.45□□□□□ -0.26
CHL1-208ENST00000453040 ATF7IPQ6VMQ6 1270 aa13.44□□□□□ -0.26
CHL1-208ENST00000453040 TMEM57Q8N5G2 664 aa13.44□□□□□ -0.26
CHL1-208ENST00000453040 NCBP1Q09161 790 aaKnown RBP13.44□□□□□ -0.26
CHL1-208ENST00000453040 UPF2Q9HAU5 1272 aaKnown RBP13.44□□□□□ -0.26
CHL1-208ENST00000453040 BCCIPQ9P287 314 aaKnown RBP eCLIP13.44□□□□□ -0.26
CHL1-208ENST00000453040 IL16Q14005 1332 aa13.44□□□□□ -0.26
CHL1-208ENST00000453040 NSD2O96028 1365 aa13.44□□□□□ -0.26
CHL1-208ENST00000453040 TRIM6-TRIM34B2RNG4 842 aa13.44□□□□□ -0.26
CHL1-208ENST00000453040 DNTTIP2Q5QJE6 756 aaKnown RBP13.44□□□□□ -0.26
CHL1-208ENST00000453040 TRIM34Q9BYJ4 488 aa13.44□□□□□ -0.26
CHL1-208ENST00000453040 BAG4O95429 457 aaKnown RBP13.43□□□□□ -0.26
CHL1-208ENST00000453040 AEBP1Q8IUX7 1158 aa13.43□□□□□ -0.26
CHL1-208ENST00000453040 TSR2Q969E8 191 aaKnown RBP13.43□□□□□ -0.26
CHL1-208ENST00000453040 DDX41Q9UJV9 622 aaKnown RBP13.43□□□□□ -0.26
CHL1-208ENST00000453040 N4BP2Q86UW6 1770 aaPredicted RBP13.43□□□□□ -0.26
CHL1-208ENST00000453040 MORC2Q9Y6X9 1032 aaPredicted RBP13.43□□□□□ -0.26
CHL1-208ENST00000453040 ANKRD36BQ8N2N9 1353 aa13.43□□□□□ -0.26
CHL1-208ENST00000453040 MYO5BQ9ULV0 1848 aa13.43□□□□□ -0.26
CHL1-208ENST00000453040 ZBTB7BO15156 539 aaPredicted RBP13.43□□□□□ -0.26
CHL1-208ENST00000453040 MTHFSP49914 203 aa13.43□□□□□ -0.26
CHL1-208ENST00000453040 PKP1Q13835 747 aa13.43□□□□□ -0.26
CHL1-208ENST00000453040 SKOR2Q2VWA4 1001 aaPredicted RBP13.43□□□□□ -0.26
CHL1-208ENST00000453040 ST7Q9NRC1 585 aa13.42□□□□□ -0.26
CHL1-208ENST00000453040 RGS12O14924 1447 aa13.42□□□□□ -0.26
CHL1-208ENST00000453040 CFAP65Q6ZU64 1925 aaKnown RBP13.42□□□□□ -0.26
CHL1-208ENST00000453040 GSPT1P15170 499 aaKnown RBP13.42□□□□□ -0.26
CHL1-208ENST00000453040 CHAMP1Q96JM3 812 aa13.42□□□□□ -0.26
CHL1-208ENST00000453040 PUS7Q96PZ0 661 aaKnown RBP13.42□□□□□ -0.26
CHL1-208ENST00000453040 SLC12A5Q9H2X9 1139 aa13.42□□□□□ -0.26
CHL1-208ENST00000453040 TBC1D9Q6ZT07 1266 aa13.41□□□□□ -0.26
CHL1-208ENST00000453040 RAD50Q92878 1312 aa13.41□□□□□ -0.26
CHL1-208ENST00000453040 SETD1AO15047 1707 aaKnown RBP13.41□□□□□ -0.26
CHL1-208ENST00000453040 FAM135BQ49AJ0 1406 aa13.41□□□□□ -0.26
CHL1-208ENST00000453040 K7ELQ4 463 aaPredicted RBP13.41□□□□□ -0.26
CHL1-208ENST00000453040 NAA30Q147X3 362 aaPredicted RBP13.41□□□□□ -0.26
CHL1-208ENST00000453040 CHD1LQ86WJ1 897 aa13.41□□□□□ -0.26
CHL1-208ENST00000453040 CNKSR2Q8WXI2 1034 aa13.41□□□□□ -0.26
CHL1-208ENST00000453040 PRIMPOLQ96LW4 560 aa13.41□□□□□ -0.26
CHL1-208ENST00000453040 NOB1Q9ULX3 412 aaKnown RBP13.41□□□□□ -0.26
CHL1-208ENST00000453040 PIBF1Q8WXW3 757 aa13.41□□□□□ -0.26
CHL1-208ENST00000453040 EXOSC9Q06265 439 aaKnown RBP13.4□□□□□ -0.26
CHL1-208ENST00000453040 GABPB1Q06547 395 aaPredicted RBP13.4□□□□□ -0.26
CHL1-208ENST00000453040 CSPP1Q1MSJ5 1256 aa13.4□□□□□ -0.26
CHL1-208ENST00000453040 HSCBQ8IWL3 235 aa13.4□□□□□ -0.26
CHL1-208ENST00000453040 DDX19BQ9UMR2 479 aa13.4□□□□□ -0.26
CHL1-208ENST00000453040 ATP10DQ9P241 1426 aa13.4□□□□□ -0.26
CHL1-208ENST00000453040 TMEM63CQ9P1W3 806 aa13.4□□□□□ -0.26
CHL1-208ENST00000453040 PTPRMP28827 1452 aa13.4□□□□□ -0.26
CHL1-208ENST00000453040 MAP2P11137 1827 aaKnown RBP13.39□□□□□ -0.27
CHL1-208ENST00000453040 KCNF1Q9H3M0 494 aa13.39□□□□□ -0.27
CHL1-208ENST00000453040 IRF6O14896 467 aa13.39□□□□□ -0.27
CHL1-208ENST00000453040 TRHP20396 242 aaPredicted RBP13.39□□□□□ -0.27
CHL1-208ENST00000453040 C14orf93Q9H972 538 aaKnown RBP13.39□□□□□ -0.27
CHL1-208ENST00000453040 AP5Z1O43299 807 aa13.38□□□□□ -0.27
CHL1-208ENST00000453040 NPM1P06748 294 aaKnown RBP eCLIP13.38□□□□□ -0.27
CHL1-208ENST00000453040 LMOD2Q6P5Q4 547 aa13.38□□□□□ -0.27
CHL1-208ENST00000453040 OGFRQ9NZT2 677 aa13.38□□□□□ -0.27
CHL1-208ENST00000453040 RBM27Q9P2N5 1060 aaKnown RBP13.38□□□□□ -0.27
CHL1-208ENST00000453040 ARHGEF40Q8TER5 1519 aa13.38□□□□□ -0.27
CHL1-208ENST00000453040 TMPOP42166 694 aaKnown RBP13.38□□□□□ -0.27
CHL1-208ENST00000453040 ABCC4O15439 1325 aa13.38□□□□□ -0.27
CHL1-208ENST00000453040 KIF16BQ96L93 1317 aa13.38□□□□□ -0.27
CHL1-208ENST00000453040 CRYBG1Q9Y4K1 1723 aa13.38□□□□□ -0.27
CHL1-208ENST00000453040 TCHHQ07283 1943 aa13.38□□□□□ -0.27
CHL1-208ENST00000453040 BORCS6Q96GS4 357 aa13.37□□□□□ -0.27
CHL1-208ENST00000453040 RIOK3O14730 519 aaKnown RBP13.37□□□□□ -0.27
CHL1-208ENST00000453040 GRIPAP1Q4V328 841 aa13.37□□□□□ -0.27
CHL1-208ENST00000453040 NPATQ14207 1427 aa13.37□□□□□ -0.27
CHL1-208ENST00000453040 RBM6P78332 1123 aaKnown RBP13.36□□□□□ -0.27
CHL1-208ENST00000453040 PDCL2Q8N4E4 241 aa13.36□□□□□ -0.27
CHL1-208ENST00000453040 IL17RAQ96F46 866 aa13.36□□□□□ -0.27
CHL1-208ENST00000453040 LCMT1Q9UIC8 334 aa13.36□□□□□ -0.27
CHL1-208ENST00000453040 GYS2P54840 703 aa13.36□□□□□ -0.27
CHL1-208ENST00000453040 A0A1W2PP64 1363 aa13.36□□□□□ -0.27
CHL1-208ENST00000453040 ALDH1L2Q3SY69 923 aa13.36□□□□□ -0.27
CHL1-208ENST00000453040 FEZ1Q99689 392 aa13.36□□□□□ -0.27
CHL1-208ENST00000453040 RAD51AP2Q09MP3 1159 aa13.35□□□□□ -0.27
CHL1-208ENST00000453040 NUTM2DQ5VT03 806 aaPredicted RBP13.35□□□□□ -0.27
CHL1-208ENST00000453040 NOLC1Q14978 699 aaKnown RBP eCLIP13.35□□□□□ -0.27
CHL1-208ENST00000453040 GBP4Q96PP9 640 aa13.35□□□□□ -0.27
CHL1-208ENST00000453040 PTMSP20962 102 aa13.34□□□□□ -0.27
CHL1-208ENST00000453040 EGFL6Q8IUX8 553 aa13.34□□□□□ -0.27
CHL1-208ENST00000453040 KIF18AQ8NI77 898 aa13.34□□□□□ -0.27
CHL1-208ENST00000453040 RGPD1P0DJD0 1748 aa13.34□□□□□ -0.27
CHL1-208ENST00000453040 NRKQ7Z2Y5 1582 aa13.34□□□□□ -0.27
CHL1-208ENST00000453040 CCDC189A1A4V9 331 aa13.34□□□□□ -0.27
CHL1-208ENST00000453040 MORC1Q86VD1 984 aa13.34□□□□□ -0.27
CHL1-208ENST00000453040 TIGD1Q96MW7 591 aa13.34□□□□□ -0.27
CHL1-208ENST00000453040 USP26Q9BXU7 913 aa13.34□□□□□ -0.27
CHL1-208ENST00000453040 LNPKQ9C0E8 428 aa13.34□□□□□ -0.27
CHL1-208ENST00000453040 ZNF853P0CG23 659 aa13.33□□□□□ -0.27
CHL1-208ENST00000453040 ASXL2Q76L83 1435 aa13.33□□□□□ -0.28
CHL1-208ENST00000453040 HNRNPH2P55795 449 aaKnown RBP13.33□□□□□ -0.28
CHL1-208ENST00000453040 INHBEP58166 350 aa13.33□□□□□ -0.28
CHL1-208ENST00000453040 AFAP1Q8N556 730 aa13.33□□□□□ -0.28
CHL1-208ENST00000453040 RIMBP3CA6NJZ7 1639 aa13.33□□□□□ -0.28
CHL1-208ENST00000453040 RIMBP3BA6NNM3 1639 aa13.33□□□□□ -0.28
CHL1-208ENST00000453040 RIMBP3Q9UFD9 1639 aa13.33□□□□□ -0.28
CHL1-208ENST00000453040 DHX16O60231 1041 aaKnown RBP13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms