RNA–Protein interactions for RNA: ENST00000449575.6

CCDC171-203, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-203ENST00000449575 KAT6BQ8WYB5 2073 aa13.19□□□□□ -0.3
CCDC171-203ENST00000449575 NCAPD2Q15021 1401 aa13.19□□□□□ -0.3
CCDC171-203ENST00000449575 ONECUT3O60422 494 aaPredicted RBP13.19□□□□□ -0.3
CCDC171-203ENST00000449575 FAM182BQ5T319 152 aa13.19□□□□□ -0.3
CCDC171-203ENST00000449575 BARGINQ6ZT62 677 aa13.19□□□□□ -0.3
CCDC171-203ENST00000449575 U2SURPO15042 1029 aaKnown RBP13.18□□□□□ -0.3
CCDC171-203ENST00000449575 SULT6B1Q6IMI4 303 aa13.18□□□□□ -0.3
CCDC171-203ENST00000449575 CFAP53Q96M91 514 aa13.17□□□□□ -0.3
CCDC171-203ENST00000449575 THRAP3Q9Y2W1 955 aaKnown RBP13.17□□□□□ -0.3
CCDC171-203ENST00000449575 IL2RBP14784 551 aa13.16□□□□□ -0.3
CCDC171-203ENST00000449575 KDRP35968 1356 aa13.15□□□□□ -0.3
CCDC171-203ENST00000449575 PKD1L3Q7Z443 1732 aa13.15□□□□□ -0.3
CCDC171-203ENST00000449575 U2AF1L5P0DN76 240 aaPredicted RBP13.14□□□□□ -0.31
CCDC171-203ENST00000449575 U2AF1Q01081 240 aaKnown RBP eCLIP13.14□□□□□ -0.31
CCDC171-203ENST00000449575 OVOS2A0A0G2JMS6 1433 aa13.14□□□□□ -0.31
CCDC171-203ENST00000449575 VIRMAQ69YN4 1812 aaKnown RBP13.14□□□□□ -0.31
CCDC171-203ENST00000449575 RAPGEF4Q8WZA2 1011 aa13.13□□□□□ -0.31
CCDC171-203ENST00000449575 DDB1Q16531 1140 aa13.13□□□□□ -0.31
CCDC171-203ENST00000449575 SBF2Q86WG5 1849 aa13.12□□□□□ -0.31
CCDC171-203ENST00000449575 TNS2Q63HR2 1409 aa13.12□□□□□ -0.31
CCDC171-203ENST00000449575 MARCH10Q8NA82 808 aaPredicted RBP13.12□□□□□ -0.31
CCDC171-203ENST00000449575 RSPH6AQ9H0K4 717 aa13.12□□□□□ -0.31
CCDC171-203ENST00000449575 MRS2Q9HD23 443 aa13.12□□□□□ -0.31
CCDC171-203ENST00000449575 DLG5Q8TDM6 1919 aa13.12□□□□□ -0.31
CCDC171-203ENST00000449575 TATP17735 454 aaPredicted RBP13.11□□□□□ -0.31
CCDC171-203ENST00000449575 PHACTR3Q96KR7 559 aa13.11□□□□□ -0.31
CCDC171-203ENST00000449575 NUDCQ9Y266 331 aa13.11□□□□□ -0.31
CCDC171-203ENST00000449575 EXOC5O00471 708 aa13.11□□□□□ -0.31
CCDC171-203ENST00000449575 KRT27Q7Z3Y8 459 aa13.11□□□□□ -0.31
CCDC171-203ENST00000449575 DDX54Q8TDD1 881 aaKnown RBP13.11□□□□□ -0.31
CCDC171-203ENST00000449575 PRKAR2BP31323 418 aa13.1□□□□□ -0.31
CCDC171-203ENST00000449575 ZCRB1Q8TBF4 217 aaKnown RBP13.1□□□□□ -0.31
CCDC171-203ENST00000449575 ADAMTS8Q9UP79 889 aa13.1□□□□□ -0.31
CCDC171-203ENST00000449575 CYP27B1O15528 508 aa13.1□□□□□ -0.31
CCDC171-203ENST00000449575 EIF5BO60841 1220 aaKnown RBP13.1□□□□□ -0.31
CCDC171-203ENST00000449575 CDCA7Q9BWT1 371 aaPredicted RBP13.1□□□□□ -0.31
CCDC171-203ENST00000449575 SENP3-EIF4A1A0A087X0R7 540 aa13.09□□□□□ -0.31
CCDC171-203ENST00000449575 PDE3BQ13370 1112 aa13.09□□□□□ -0.31
CCDC171-203ENST00000449575 CCDC146Q8IYE0 955 aa13.09□□□□□ -0.31
CCDC171-203ENST00000449575 TOGARAM1Q9Y4F4 1720 aa13.09□□□□□ -0.31
CCDC171-203ENST00000449575 PNISRQ8TF01 805 aaKnown RBP13.09□□□□□ -0.31
CCDC171-203ENST00000449575 DOT1LQ8TEK3 1739 aa13.08□□□□□ -0.32
CCDC171-203ENST00000449575 MTHFSDQ2M296 383 aaKnown RBP13.08□□□□□ -0.32
CCDC171-203ENST00000449575 PTF1AQ7RTS3 328 aa13.08□□□□□ -0.32
CCDC171-203ENST00000449575 PLEKHF1Q96S99 279 aa13.08□□□□□ -0.32
CCDC171-203ENST00000449575 ITGB4P16144 1822 aa13.07□□□□□ -0.32
CCDC171-203ENST00000449575 FCHSD2O94868 740 aa13.07□□□□□ -0.32
CCDC171-203ENST00000449575 WDR43Q15061 677 aaKnown RBP eCLIP13.07□□□□□ -0.32
CCDC171-203ENST00000449575 ZNF530Q6P9A1 599 aaPredicted RBP13.06□□□□□ -0.32
CCDC171-203ENST00000449575 SCN11AQ9UI33 1791 aa13.05□□□□□ -0.32
CCDC171-203ENST00000449575 PLEKHO1Q53GL0 409 aaPredicted RBP13.05□□□□□ -0.32
CCDC171-203ENST00000449575 FAM9BQ8IZU0 186 aa13.05□□□□□ -0.32
CCDC171-203ENST00000449575 ACSBG1Q96GR2 724 aa13.05□□□□□ -0.32
CCDC171-203ENST00000449575 SPG7Q9UQ90 795 aa13.05□□□□□ -0.32
CCDC171-203ENST00000449575 PCDH11XQ9BZA7 1347 aa13.05□□□□□ -0.32
CCDC171-203ENST00000449575 PCDH11YQ9BZA8 1340 aa13.05□□□□□ -0.32
CCDC171-203ENST00000449575 KCNQ2O43526 872 aa13.05□□□□□ -0.32
CCDC171-203ENST00000449575 PHKG2P15735 406 aa13.05□□□□□ -0.32
CCDC171-203ENST00000449575 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.05□□□□□ -0.32
CCDC171-203ENST00000449575 KDM6AO15550 1401 aaPredicted RBP13.03□□□□□ -0.32
CCDC171-203ENST00000449575 TNS1Q9HBL0 1735 aaKnown RBP13.03□□□□□ -0.32
CCDC171-203ENST00000449575 MPRIPQ6WCQ1 1025 aa13.03□□□□□ -0.32
CCDC171-203ENST00000449575 TRIM37O94972 964 aa13.03□□□□□ -0.32
CCDC171-203ENST00000449575 AMOTQ4VCS5 1084 aa13.03□□□□□ -0.32
CCDC171-203ENST00000449575 IFNL2Q8IZJ0 200 aa13.03□□□□□ -0.32
CCDC171-203ENST00000449575 RRP7AQ9Y3A4 280 aaKnown RBP13.03□□□□□ -0.32
CCDC171-203ENST00000449575 BTAF1O14981 1849 aa13.02□□□□□ -0.32
CCDC171-203ENST00000449575 CCER2I3L3R5 266 aa13.02□□□□□ -0.32
CCDC171-203ENST00000449575 LGR6Q9HBX8 967 aa13.02□□□□□ -0.32
CCDC171-203ENST00000449575 NHSQ6T4R5 1651 aa13.02□□□□□ -0.33
CCDC171-203ENST00000449575 FAM196AQ6ZSG2 479 aa13.02□□□□□ -0.33
CCDC171-203ENST00000449575 DCTN1Q14203 1278 aa13.01□□□□□ -0.33
CCDC171-203ENST00000449575 NKX1-1Q15270 411 aaPredicted RBP13.01□□□□□ -0.33
CCDC171-203ENST00000449575 ADAMTS7Q9UKP4 1686 aa13.01□□□□□ -0.33
CCDC171-203ENST00000449575 PRIM1P49642 420 aaKnown RBP13□□□□□ -0.33
CCDC171-203ENST00000449575 NEUROD2Q15784 382 aa13□□□□□ -0.33
CCDC171-203ENST00000449575 C1orf141Q5JVX7 400 aa13□□□□□ -0.33
CCDC171-203ENST00000449575 SYTL4Q96C24 671 aaPredicted RBP13□□□□□ -0.33
CCDC171-203ENST00000449575 PLEKHG2Q9H7P9 1386 aa13□□□□□ -0.33
CCDC171-203ENST00000449575 AKAP4Q5JQC9 854 aa13□□□□□ -0.33
CCDC171-203ENST00000449575 RUNDC1Q96C34 613 aa13□□□□□ -0.33
CCDC171-203ENST00000449575 MAPK8IP3Q9UPT6 1336 aa12.99□□□□□ -0.33
CCDC171-203ENST00000449575 APAF1O14727 1248 aa12.99□□□□□ -0.33
CCDC171-203ENST00000449575 IL17REQ8NFR9 667 aa12.99□□□□□ -0.33
CCDC171-203ENST00000449575 BCL9O00512 1426 aa12.99□□□□□ -0.33
CCDC171-203ENST00000449575 MCM10Q7L590 875 aa12.99□□□□□ -0.33
CCDC171-203ENST00000449575 GAS2L2Q8NHY3 880 aa12.99□□□□□ -0.33
CCDC171-203ENST00000449575 UPF1Q92900 1129 aaKnown RBP eCLIP12.99□□□□□ -0.33
CCDC171-203ENST00000449575 THUMPD2Q9BTF0 503 aaKnown RBP12.99□□□□□ -0.33
CCDC171-203ENST00000449575 RBM19Q9Y4C8 960 aaKnown RBP12.99□□□□□ -0.33
CCDC171-203ENST00000449575 SIPA1L3O60292 1781 aaPredicted RBP12.99□□□□□ -0.33
CCDC171-203ENST00000449575 MAP3K5Q99683 1374 aa12.98□□□□□ -0.33
CCDC171-203ENST00000449575 TMPOP42166 694 aaKnown RBP12.98□□□□□ -0.33
CCDC171-203ENST00000449575 GNAT3A8MTJ3 354 aa12.98□□□□□ -0.33
CCDC171-203ENST00000449575 NFE2L2Q16236 605 aa12.98□□□□□ -0.33
CCDC171-203ENST00000449575 DCAF5Q96JK2 942 aa12.97□□□□□ -0.33
CCDC171-203ENST00000449575 RNMTO43148 476 aaKnown RBP12.97□□□□□ -0.33
CCDC171-203ENST00000449575 RIPK4P57078 832 aa12.96□□□□□ -0.33
CCDC171-203ENST00000449575 DEFB132Q7Z7B7 95 aa12.96□□□□□ -0.33
CCDC171-203ENST00000449575 SALL2Q9Y467 1007 aaPredicted RBP12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms