RNA–Protein interactions for RNA: ENST00000448257.6

CDK1-204, Transcript of cyclin dependent kinase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDK1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK1-204ENST00000448257 ILDR2Q71H61 639 aa22.73■■□□□ 1.23
CDK1-204ENST00000448257 SHANK3Q9BYB0 1731 aa22.73■■□□□ 1.23
CDK1-204ENST00000448257 RAPGEF4Q8WZA2 1011 aa22.72■■□□□ 1.23
CDK1-204ENST00000448257 TNS2Q63HR2 1409 aa22.72■■□□□ 1.23
CDK1-204ENST00000448257 NUDCQ9Y266 331 aa22.71■■□□□ 1.23
CDK1-204ENST00000448257 PKD1L3Q7Z443 1732 aa22.71■■□□□ 1.23
CDK1-204ENST00000448257 DDB1Q16531 1140 aa22.7■■□□□ 1.23
CDK1-204ENST00000448257 U2AF1L5P0DN76 240 aaPredicted RBP22.69■■□□□ 1.22
CDK1-204ENST00000448257 TATP17735 454 aaPredicted RBP22.69■■□□□ 1.22
CDK1-204ENST00000448257 U2AF1Q01081 240 aaKnown RBP eCLIP22.69■■□□□ 1.22
CDK1-204ENST00000448257 EXOC5O00471 708 aa22.67■■□□□ 1.22
CDK1-204ENST00000448257 KRT27Q7Z3Y8 459 aa22.67■■□□□ 1.22
CDK1-204ENST00000448257 FAM182BQ5T319 152 aa22.66■■□□□ 1.22
CDK1-204ENST00000448257 RSPH6AQ9H0K4 717 aa22.66■■□□□ 1.22
CDK1-204ENST00000448257 ZCRB1Q8TBF4 217 aaKnown RBP22.65■■□□□ 1.22
CDK1-204ENST00000448257 MRS2Q9HD23 443 aa22.65■■□□□ 1.22
CDK1-204ENST00000448257 PDE3BQ13370 1112 aa22.65■■□□□ 1.22
CDK1-204ENST00000448257 MARCH10Q8NA82 808 aaPredicted RBP22.64■■□□□ 1.21
CDK1-204ENST00000448257 PLEKHG2Q9H7P9 1386 aa22.64■■□□□ 1.21
CDK1-204ENST00000448257 PRKAR2BP31323 418 aa22.63■■□□□ 1.21
CDK1-204ENST00000448257 SUPT16HQ9Y5B9 1047 aaKnown RBP22.62■■□□□ 1.21
CDK1-204ENST00000448257 FCHSD2O94868 740 aa22.61■■□□□ 1.21
CDK1-204ENST00000448257 DDX54Q8TDD1 881 aaKnown RBP22.61■■□□□ 1.21
CDK1-204ENST00000448257 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.61■■□□□ 1.213e-15■■■■□ 25.5
CDK1-204ENST00000448257 PCDH11XQ9BZA7 1347 aa22.6■■□□□ 1.21
CDK1-204ENST00000448257 PCDH11YQ9BZA8 1340 aa22.6■■□□□ 1.21
CDK1-204ENST00000448257 CYP27B1O15528 508 aa22.6■■□□□ 1.21
CDK1-204ENST00000448257 WDR43Q15061 677 aaKnown RBP eCLIP22.6■■□□□ 1.21
CDK1-204ENST00000448257 SPG7Q9UQ90 795 aa22.6■■□□□ 1.21
CDK1-204ENST00000448257 ADAMTS8Q9UP79 889 aa22.59■■□□□ 1.21
CDK1-204ENST00000448257 PHACTR3Q96KR7 559 aa22.59■■□□□ 1.21
CDK1-204ENST00000448257 PLEKHO1Q53GL0 409 aaPredicted RBP22.58■■□□□ 1.21
CDK1-204ENST00000448257 PNISRQ8TF01 805 aaKnown RBP22.58■■□□□ 1.21
CDK1-204ENST00000448257 AMOTQ4VCS5 1084 aa22.57■■□□□ 1.2
CDK1-204ENST00000448257 PLEKHF1Q96S99 279 aa22.57■■□□□ 1.2
CDK1-204ENST00000448257 MTHFSDQ2M296 383 aaKnown RBP22.56■■□□□ 1.2
CDK1-204ENST00000448257 ZNF530Q6P9A1 599 aaPredicted RBP22.55■■□□□ 1.2
CDK1-204ENST00000448257 SBF2Q86WG5 1849 aa22.55■■□□□ 1.2
CDK1-204ENST00000448257 PHKG2P15735 406 aa22.55■■□□□ 1.2
CDK1-204ENST00000448257 HNRNPUQ00839 825 aaKnown RBP eCLIP22.54■■□□□ 1.2
CDK1-204ENST00000448257 DOT1LQ8TEK3 1739 aa22.54■■□□□ 1.2
CDK1-204ENST00000448257 BCL9O00512 1426 aa22.54■■□□□ 1.2
CDK1-204ENST00000448257 TOGARAM1Q9Y4F4 1720 aa22.53■■□□□ 1.2
CDK1-204ENST00000448257 CCDC146Q8IYE0 955 aa22.53■■□□□ 1.2
CDK1-204ENST00000448257 FAM196AQ6ZSG2 479 aa22.53■■□□□ 1.2
CDK1-204ENST00000448257 IFNL2Q8IZJ0 200 aa22.53■■□□□ 1.2
CDK1-204ENST00000448257 NKX1-1Q15270 411 aaPredicted RBP22.5■■□□□ 1.19
CDK1-204ENST00000448257 PNNQ9H307 717 aaKnown RBP22.5■■□□□ 1.19
CDK1-204ENST00000448257 NHSQ6T4R5 1651 aa22.5■■□□□ 1.19
CDK1-204ENST00000448257 KDM6AO15550 1401 aaPredicted RBP22.5■■□□□ 1.19
CDK1-204ENST00000448257 VIRMAQ69YN4 1812 aaKnown RBP22.49■■□□□ 1.19
CDK1-204ENST00000448257 C1orf141Q5JVX7 400 aa22.49■■□□□ 1.19
CDK1-204ENST00000448257 GAS2L2Q8NHY3 880 aa22.49■■□□□ 1.19
CDK1-204ENST00000448257 MAPK8IP3Q9UPT6 1336 aa22.49■■□□□ 1.19
CDK1-204ENST00000448257 DLG5Q8TDM6 1919 aa22.49■■□□□ 1.19
CDK1-204ENST00000448257 AKAP4Q5JQC9 854 aa22.49■■□□□ 1.19
CDK1-204ENST00000448257 ACSBG1Q96GR2 724 aa22.49■■□□□ 1.19
CDK1-204ENST00000448257 PTF1AQ7RTS3 328 aa22.48■■□□□ 1.19
CDK1-204ENST00000448257 FAM9BQ8IZU0 186 aa22.48■■□□□ 1.19
CDK1-204ENST00000448257 TNS1Q9HBL0 1735 aaKnown RBP22.48■■□□□ 1.19
CDK1-204ENST00000448257 SCN11AQ9UI33 1791 aa22.48■■□□□ 1.19
CDK1-204ENST00000448257 NEFMP07197 916 aa22.47■■□□□ 1.19
CDK1-204ENST00000448257 RUNDC1Q96C34 613 aa22.47■■□□□ 1.19
CDK1-204ENST00000448257 ADAMTS7Q9UKP4 1686 aa22.47■■□□□ 1.19
CDK1-204ENST00000448257 KCNQ2O43526 872 aa22.47■■□□□ 1.19
CDK1-204ENST00000448257 TRIM37O94972 964 aa22.47■■□□□ 1.19
CDK1-204ENST00000448257 MPRIPQ6WCQ1 1025 aa22.47■■□□□ 1.19
CDK1-204ENST00000448257 MAP3K5Q99683 1374 aa22.47■■□□□ 1.19
CDK1-204ENST00000448257 KAT6BQ8WYB5 2073 aa22.47■■□□□ 1.19
CDK1-204ENST00000448257 ITGB4P16144 1822 aa22.46■■□□□ 1.19
CDK1-204ENST00000448257 DCAF5Q96JK2 942 aa22.45■■□□□ 1.18
CDK1-204ENST00000448257 HSP90AB1P08238 724 aaKnown RBP22.44■■□□□ 1.18
CDK1-204ENST00000448257 NFE2L2Q16236 605 aa22.44■■□□□ 1.18
CDK1-204ENST00000448257 GNAT3A8MTJ3 354 aa22.43■■□□□ 1.18
CDK1-204ENST00000448257 PRIM1P49642 420 aaKnown RBP22.43■■□□□ 1.18
CDK1-204ENST00000448257 BTAF1O14981 1849 aa22.43■■□□□ 1.18
CDK1-204ENST00000448257 UPF1Q92900 1129 aaKnown RBP eCLIP22.43■■□□□ 1.18
CDK1-204ENST00000448257 SYTL4Q96C24 671 aaPredicted RBP22.43■■□□□ 1.18
CDK1-204ENST00000448257 LGR6Q9HBX8 967 aa22.43■■□□□ 1.18
CDK1-204ENST00000448257 RRP7AQ9Y3A4 280 aaKnown RBP22.42■■□□□ 1.18
CDK1-204ENST00000448257 TMPOP42166 694 aaKnown RBP22.41■■□□□ 1.18
CDK1-204ENST00000448257 PELP1Q8IZL8 1130 aaKnown RBP22.41■■□□□ 1.18
CDK1-204ENST00000448257 APAF1O14727 1248 aa22.41■■□□□ 1.18
CDK1-204ENST00000448257 BCL11BQ9C0K0 894 aaPredicted RBP22.41■■□□□ 1.18
CDK1-204ENST00000448257 RNMTO43148 476 aaKnown RBP22.4■■□□□ 1.18
CDK1-204ENST00000448257 IL17REQ8NFR9 667 aa22.4■■□□□ 1.18
CDK1-204ENST00000448257 MRC1P22897 1456 aa22.4■■□□□ 1.18
CDK1-204ENST00000448257 SENP3-EIF4A1A0A087X0R7 540 aa22.39■■□□□ 1.18
CDK1-204ENST00000448257 DCTN1Q14203 1278 aa22.39■■□□□ 1.17
CDK1-204ENST00000448257 FKBP8Q14318 412 aa22.39■■□□□ 1.17
CDK1-204ENST00000448257 NEUROD2Q15784 382 aa22.39■■□□□ 1.17
CDK1-204ENST00000448257 MCM10Q7L590 875 aa22.39■■□□□ 1.17
CDK1-204ENST00000448257 ERVV-2B6SEH9 535 aa22.38■■□□□ 1.17
CDK1-204ENST00000448257 RIPK4P57078 832 aa22.38■■□□□ 1.17
CDK1-204ENST00000448257 CEMIPQ8WUJ3 1361 aa22.38■■□□□ 1.17
CDK1-204ENST00000448257 ZBED9Q6R2W3 1325 aa22.38■■□□□ 1.17
CDK1-204ENST00000448257 SIPA1L3O60292 1781 aaPredicted RBP22.37■■□□□ 1.17
CDK1-204ENST00000448257 PIGBQ92521 554 aa22.36■■□□□ 1.17
CDK1-204ENST00000448257 RTF1Q92541 710 aaKnown RBP22.36■■□□□ 1.17
CDK1-204ENST00000448257 TMOD3Q9NYL9 352 aa22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 102.7 ms