RNA–Protein interactions for RNA: ENST00000447779.1

RPL39P29-201, Transcript of ribosomal protein L39 pseudogene 29, humanhuman

BASIC

Gene RPL39P29, Length 157 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P29-201ENST00000447779 USP17L1Q7RTZ2 530 aa4.72□□□□□ -1.65
RPL39P29-201ENST00000447779 SEPT12Q8IYM1 358 aa4.72□□□□□ -1.65
RPL39P29-201ENST00000447779 PLPP7Q8NBV4 271 aa4.72□□□□□ -1.65
RPL39P29-201ENST00000447779 SLC10A4Q96EP9 437 aa4.72□□□□□ -1.65
RPL39P29-201ENST00000447779 TRAIPQ9BWF2 469 aa4.72□□□□□ -1.65
RPL39P29-201ENST00000447779 ATG7O95352 703 aa4.71□□□□□ -1.66
RPL39P29-201ENST00000447779 VSIG8P0DPA2 414 aa4.71□□□□□ -1.66
RPL39P29-201ENST00000447779 RETREG2Q8NC44 543 aa4.71□□□□□ -1.66
RPL39P29-201ENST00000447779 ZFP42Q96MM3 310 aa4.71□□□□□ -1.66
RPL39P29-201ENST00000447779 KLF16Q9BXK1 252 aaPredicted RBP4.71□□□□□ -1.66
RPL39P29-201ENST00000447779 MAP4K5Q9Y4K4 846 aa4.71□□□□□ -1.66
RPL39P29-201ENST00000447779 WASF2Q9Y6W5 498 aa4.71□□□□□ -1.66
RPL39P29-201ENST00000447779 ATP5J2-PTCD1G3V325 749 aa4.7□□□□□ -1.66
RPL39P29-201ENST00000447779 CSB-PGBD3P0DP91 1061 aa4.7□□□□□ -1.66
RPL39P29-201ENST00000447779 VEGFBP49765 207 aa4.7□□□□□ -1.66
RPL39P29-201ENST00000447779 NCOA4Q13772 614 aa4.7□□□□□ -1.66
RPL39P29-201ENST00000447779 ELOAQ14241 798 aaKnown RBP4.7□□□□□ -1.66
RPL39P29-201ENST00000447779 TSGA10IPQ3SY00 556 aa4.7□□□□□ -1.66
RPL39P29-201ENST00000447779 CDCA8Q53HL2 280 aa4.7□□□□□ -1.66
RPL39P29-201ENST00000447779 CDK15Q96Q40 435 aa4.7□□□□□ -1.66
RPL39P29-201ENST00000447779 MKRN1Q9UHC7 482 aaKnown RBP4.7□□□□□ -1.66
RPL39P29-201ENST00000447779 USTQ9Y2C2 406 aa4.7□□□□□ -1.66
RPL39P29-201ENST00000447779 EML3Q32P44 896 aa4.69□□□□□ -1.66
RPL39P29-201ENST00000447779 DEPDC4Q8N2C3 294 aa4.69□□□□□ -1.66
RPL39P29-201ENST00000447779 CCDC85AQ96PX6 553 aaPredicted RBP4.69□□□□□ -1.66
RPL39P29-201ENST00000447779 KCTD15Q96SI1 283 aaPredicted RBP4.69□□□□□ -1.66
RPL39P29-201ENST00000447779 DOLKQ9UPQ8 538 aa4.69□□□□□ -1.66
RPL39P29-201ENST00000447779 FAM196BA6NMK8 535 aa4.68□□□□□ -1.66
RPL39P29-201ENST00000447779 TIMP2P16035 220 aa4.68□□□□□ -1.66
RPL39P29-201ENST00000447779 USP4Q13107 963 aa4.68□□□□□ -1.66
RPL39P29-201ENST00000447779 MRPL14Q6P1L8 145 aaKnown RBP4.68□□□□□ -1.66
RPL39P29-201ENST00000447779 LARP1Q6PKG0 1096 aaKnown RBP4.68□□□□□ -1.66
RPL39P29-201ENST00000447779 VASH1Q7L8A9 365 aaPredicted RBP4.68□□□□□ -1.66
RPL39P29-201ENST00000447779 TRIM50Q86XT4 487 aa4.68□□□□□ -1.66
RPL39P29-201ENST00000447779 TRIM52Q96A61 297 aa4.68□□□□□ -1.66
RPL39P29-201ENST00000447779 SIRT1Q96EB6 747 aa4.68□□□□□ -1.66
RPL39P29-201ENST00000447779 NOD1Q9Y239 953 aa4.68□□□□□ -1.66
RPL39P29-201ENST00000447779 TLL2Q9Y6L7 1015 aa4.68□□□□□ -1.66
RPL39P29-201ENST00000447779 RASA1P20936 1047 aa4.67□□□□□ -1.66
RPL39P29-201ENST00000447779 GRM5P41594 1212 aa4.67□□□□□ -1.66
RPL39P29-201ENST00000447779 GSK3AP49840 483 aa4.67□□□□□ -1.66
RPL39P29-201ENST00000447779 ATP1A2P50993 1020 aa4.67□□□□□ -1.66
RPL39P29-201ENST00000447779 PTK7Q13308 1070 aa4.67□□□□□ -1.66
RPL39P29-201ENST00000447779 NNTQ13423 1086 aa4.67□□□□□ -1.66
RPL39P29-201ENST00000447779 INTS6LQ5JSJ4 861 aaKnown RBP4.67□□□□□ -1.66
RPL39P29-201ENST00000447779 KCTD17Q8N5Z5 321 aa4.67□□□□□ -1.66
RPL39P29-201ENST00000447779 TMEM88BA6NKF7 163 aa4.66□□□□□ -1.66
RPL39P29-201ENST00000447779 USP17L15C9J2P7 530 aa4.66□□□□□ -1.66
RPL39P29-201ENST00000447779 USP17L10C9JJH3 530 aa4.66□□□□□ -1.66
RPL39P29-201ENST00000447779 USP17L13C9JLJ4 530 aa4.66□□□□□ -1.66
RPL39P29-201ENST00000447779 USP17L12C9JPN9 530 aa4.66□□□□□ -1.66
RPL39P29-201ENST00000447779 USP17L11C9JVI0 530 aa4.66□□□□□ -1.66
RPL39P29-201ENST00000447779 USP17L21D6R901 530 aa4.66□□□□□ -1.66
RPL39P29-201ENST00000447779 USP17L18D6R9N7 530 aa4.66□□□□□ -1.66
RPL39P29-201ENST00000447779 USP17L22D6RA61 530 aa4.66□□□□□ -1.66
RPL39P29-201ENST00000447779 USP17L17D6RBQ6 530 aa4.66□□□□□ -1.66
RPL39P29-201ENST00000447779 USP17L19D6RCP7 530 aa4.66□□□□□ -1.66
RPL39P29-201ENST00000447779 USP17L20D6RJB6 530 aa4.66□□□□□ -1.66
RPL39P29-201ENST00000447779 ZBTB7BO15156 539 aaPredicted RBP4.66□□□□□ -1.66
RPL39P29-201ENST00000447779 ADH1CP00326 375 aa4.66□□□□□ -1.66
RPL39P29-201ENST00000447779 DHX9Q08211 1270 aaKnown RBP4.66□□□□□ -1.66
RPL39P29-201ENST00000447779 USP17L24Q0WX57 530 aa4.66□□□□□ -1.66
RPL39P29-201ENST00000447779 NR5A1Q13285 461 aa4.66□□□□□ -1.66
RPL39P29-201ENST00000447779 ARID5BQ14865 1188 aa4.66□□□□□ -1.66
RPL39P29-201ENST00000447779 CRTC2Q53ET0 693 aaPredicted RBP4.66□□□□□ -1.66
RPL39P29-201ENST00000447779 LARGE2Q8N3Y3 721 aa4.66□□□□□ -1.66
RPL39P29-201ENST00000447779 OGFOD1Q8N543 542 aa4.66□□□□□ -1.66
RPL39P29-201ENST00000447779 CDCA7Q9BWT1 371 aaPredicted RBP4.66□□□□□ -1.66
RPL39P29-201ENST00000447779 DNAAF2Q9NVR5 837 aaKnown RBP4.66□□□□□ -1.66
RPL39P29-201ENST00000447779 NOVA2Q9UNW9 492 aaKnown RBP4.66□□□□□ -1.66
RPL39P29-201ENST00000447779 PCDHB11Q9Y5F2 797 aa4.66□□□□□ -1.66
RPL39P29-201ENST00000447779 ERVH48-1M5A8F1 160 aa4.65□□□□□ -1.67
RPL39P29-201ENST00000447779 WDR4P57081 412 aaKnown RBP4.65□□□□□ -1.67
RPL39P29-201ENST00000447779 CLDN10P78369 228 aa4.65□□□□□ -1.67
RPL39P29-201ENST00000447779 KCNMA1Q12791 1236 aa4.65□□□□□ -1.67
RPL39P29-201ENST00000447779 SCARF1Q14162 830 aa4.65□□□□□ -1.67
RPL39P29-201ENST00000447779 OXLD1Q5BKU9 147 aa4.65□□□□□ -1.67
RPL39P29-201ENST00000447779 ANKMY2Q8IV38 441 aa4.65□□□□□ -1.67
RPL39P29-201ENST00000447779 FAM200AQ8TCP9 573 aa4.65□□□□□ -1.67
RPL39P29-201ENST00000447779 PURBQ96QR8 312 aaKnown RBP4.65□□□□□ -1.67
RPL39P29-201ENST00000447779 SOBPA7XYQ1 873 aa4.64□□□□□ -1.67
RPL39P29-201ENST00000447779 DKK1O94907 266 aa4.64□□□□□ -1.67
RPL39P29-201ENST00000447779 BRD1O95696 1058 aa4.64□□□□□ -1.67
RPL39P29-201ENST00000447779 MYCP01106 439 aaPredicted RBP4.64□□□□□ -1.67
RPL39P29-201ENST00000447779 FSHRP23945 695 aa4.64□□□□□ -1.67
RPL39P29-201ENST00000447779 RAB15P59190 212 aa4.64□□□□□ -1.67
RPL39P29-201ENST00000447779 ERVK-9P63128 1117 aa4.64□□□□□ -1.67
RPL39P29-201ENST00000447779 GTF2IP78347 998 aa4.64□□□□□ -1.67
RPL39P29-201ENST00000447779 TRIM26Q12899 539 aaPredicted RBP4.64□□□□□ -1.67
RPL39P29-201ENST00000447779 TMEM164Q5U3C3 297 aa4.64□□□□□ -1.67
RPL39P29-201ENST00000447779 SIX5Q8N196 739 aa4.64□□□□□ -1.67
RPL39P29-201ENST00000447779 ZMIZ1Q9ULJ6 1067 aa4.64□□□□□ -1.67
RPL39P29-201ENST00000447779 PCDHGA11Q9Y5H2 935 aa4.64□□□□□ -1.67
RPL39P29-201ENST00000447779 ZBTB7CA1YPR0 619 aa4.63□□□□□ -1.67
RPL39P29-201ENST00000447779 DPYDQ12882 1025 aa4.63□□□□□ -1.67
RPL39P29-201ENST00000447779 CCDC102BQ68D86 513 aa4.63□□□□□ -1.67
RPL39P29-201ENST00000447779 CC2D2BQ6DHV5 1058 aa4.63□□□□□ -1.67
RPL39P29-201ENST00000447779 CCDC116Q8IYX3 515 aa4.63□□□□□ -1.67
RPL39P29-201ENST00000447779 STK32AQ8WU08 396 aa4.63□□□□□ -1.67
RPL39P29-201ENST00000447779 ESF1Q9H501 851 aaKnown RBP4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms