RNA–Protein interactions for RNA: ENST00000446987.5

DDX56-206, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-206ENST00000446987 HOXC9P31274 260 aa16.84■□□□□ 0.29
DDX56-206ENST00000446987 RBM6P78332 1123 aaKnown RBP16.84■□□□□ 0.29
DDX56-206ENST00000446987 CRB1P82279 1406 aa16.84■□□□□ 0.29
DDX56-206ENST00000446987 CLCN1P35523 988 aa16.84■□□□□ 0.29
DDX56-206ENST00000446987 IP6K1Q92551 441 aa16.84■□□□□ 0.29
DDX56-206ENST00000446987 SPATA31A1Q5TZJ5 1347 aa16.84■□□□□ 0.29
DDX56-206ENST00000446987 RXRBP28702 533 aa16.83■□□□□ 0.28
DDX56-206ENST00000446987 WDR17Q8IZU2 1322 aa16.83■□□□□ 0.28
DDX56-206ENST00000446987 KIF24Q5T7B8 1368 aa16.83■□□□□ 0.28
DDX56-206ENST00000446987 POLKQ9UBT6 870 aa16.82■□□□□ 0.28
DDX56-206ENST00000446987 FLT4P35916 1363 aa16.82■□□□□ 0.28
DDX56-206ENST00000446987 PARP4Q9UKK3 1724 aaKnown RBP16.82■□□□□ 0.28
DDX56-206ENST00000446987 RRAGDQ9NQL2 400 aaPredicted RBP16.82■□□□□ 0.28
DDX56-206ENST00000446987 EP400Q96L91 3159 aa16.82■□□□□ 0.28
DDX56-206ENST00000446987 LRRC37A3O60309 1634 aa16.81■□□□□ 0.28
DDX56-206ENST00000446987 TNNT2P45379 298 aaPredicted RBP16.81■□□□□ 0.28
DDX56-206ENST00000446987 CC2D1BQ5T0F9 858 aaKnown RBP16.81■□□□□ 0.28
DDX56-206ENST00000446987 DISP2A7MBM2 1401 aa16.8■□□□□ 0.28
DDX56-206ENST00000446987 INSRP06213 1382 aa16.8■□□□□ 0.28
DDX56-206ENST00000446987 ONECUT3O60422 494 aaPredicted RBP16.8■□□□□ 0.28
DDX56-206ENST00000446987 MORC1Q86VD1 984 aa16.8■□□□□ 0.28
DDX56-206ENST00000446987 HSP90AB2PQ58FF8 381 aa16.79■□□□□ 0.28
DDX56-206ENST00000446987 ANKRD24Q8TF21 1146 aa16.79■□□□□ 0.28
DDX56-206ENST00000446987 RGPD1P0DJD0 1748 aa16.79■□□□□ 0.28
DDX56-206ENST00000446987 AMPHP49418 695 aa16.78■□□□□ 0.28
DDX56-206ENST00000446987 PNNQ9H307 717 aaKnown RBP16.78■□□□□ 0.28
DDX56-206ENST00000446987 NCAPD2Q15021 1401 aa16.78■□□□□ 0.28
DDX56-206ENST00000446987 COL3A1P02461 1466 aaPredicted RBP16.78■□□□□ 0.28
DDX56-206ENST00000446987 EVA1CP58658 441 aa16.78■□□□□ 0.28
DDX56-206ENST00000446987 CCDC9Q9Y3X0 531 aaKnown RBP16.78■□□□□ 0.28
DDX56-206ENST00000446987 CALD1Q05682 793 aaKnown RBP16.77■□□□□ 0.27
DDX56-206ENST00000446987 FAM98CQ17RN3 349 aaKnown RBP16.77■□□□□ 0.27
DDX56-206ENST00000446987 SHANK3Q9BYB0 1731 aa16.77■□□□□ 0.27
DDX56-206ENST00000446987 PARD3Q8TEW0 1356 aa16.76■□□□□ 0.27
DDX56-206ENST00000446987 RRP1P56182 461 aaKnown RBP16.76■□□□□ 0.27
DDX56-206ENST00000446987 BARGINQ6ZT62 677 aa16.76■□□□□ 0.27
DDX56-206ENST00000446987 CARD10Q9BWT7 1032 aa16.76■□□□□ 0.27
DDX56-206ENST00000446987 TOM1L2Q6ZVM7 507 aa16.75■□□□□ 0.27
DDX56-206ENST00000446987 TCP11L2Q8N4U5 519 aa16.75■□□□□ 0.27
DDX56-206ENST00000446987 CNGB1Q14028 1251 aaPredicted RBP16.74■□□□□ 0.27
DDX56-206ENST00000446987 LTV1Q96GA3 475 aaPredicted RBP16.74■□□□□ 0.27
DDX56-206ENST00000446987 SEPT12Q8IYM1 358 aa16.73■□□□□ 0.27
DDX56-206ENST00000446987 NAP1L5Q96NT1 182 aaPredicted RBP16.73■□□□□ 0.27
DDX56-206ENST00000446987 MEGF6O75095 1541 aa16.73■□□□□ 0.27
DDX56-206ENST00000446987 CSB-PGBD3P0DP91 1061 aa16.73■□□□□ 0.27
DDX56-206ENST00000446987 PDCL3Q9H2J4 239 aa16.73■□□□□ 0.27
DDX56-206ENST00000446987 THRAP3Q9Y2W1 955 aaKnown RBP16.73■□□□□ 0.27
DDX56-206ENST00000446987 NBPF6Q5VWK0 638 aa16.72■□□□□ 0.27
DDX56-206ENST00000446987 NBPF4Q96M43 638 aa16.72■□□□□ 0.27
DDX56-206ENST00000446987 EIF4A2Q14240 407 aaKnown RBP16.71■□□□□ 0.27
DDX56-206ENST00000446987 TPM2P07951 284 aa16.71■□□□□ 0.27
DDX56-206ENST00000446987 NLRP2Q9NX02 1062 aa16.71■□□□□ 0.27
DDX56-206ENST00000446987 PKD1L3Q7Z443 1732 aa16.7■□□□□ 0.26
DDX56-206ENST00000446987 TNS2Q63HR2 1409 aa16.7■□□□□ 0.26
DDX56-206ENST00000446987 FRAT2O75474 233 aaPredicted RBP16.7■□□□□ 0.26
DDX56-206ENST00000446987 MTHFSP49914 203 aa16.7■□□□□ 0.26
DDX56-206ENST00000446987 AAMPQ13685 434 aa16.69■□□□□ 0.26
DDX56-206ENST00000446987 USHBP1Q8N6Y0 703 aa16.69■□□□□ 0.26
DDX56-206ENST00000446987 PPP2R1AP30153 589 aa16.69■□□□□ 0.26
DDX56-206ENST00000446987 EYA1Q99502 592 aa16.67■□□□□ 0.26
DDX56-206ENST00000446987 IGSF1Q8N6C5 1336 aa16.67■□□□□ 0.26
DDX56-206ENST00000446987 OVOS2A0A0G2JMS6 1433 aa16.67■□□□□ 0.26
DDX56-206ENST00000446987 FGD1P98174 961 aa16.67■□□□□ 0.26
DDX56-206ENST00000446987 SBF2Q86WG5 1849 aa16.67■□□□□ 0.26
DDX56-206ENST00000446987 IL13P35225 146 aa16.66■□□□□ 0.26
DDX56-206ENST00000446987 RBM10P98175 930 aaKnown RBP16.66■□□□□ 0.26
DDX56-206ENST00000446987 PDE3BQ13370 1112 aa16.66■□□□□ 0.26
DDX56-206ENST00000446987 EXOC6Q8TAG9 804 aa16.66■□□□□ 0.26
DDX56-206ENST00000446987 TNS1Q9HBL0 1735 aaKnown RBP16.65■□□□□ 0.26
DDX56-206ENST00000446987 A0A0G2JS52 829 aa16.65■□□□□ 0.26
DDX56-206ENST00000446987 KRT27Q7Z3Y8 459 aa16.65■□□□□ 0.26
DDX56-206ENST00000446987 IL2RBP14784 551 aa16.64■□□□□ 0.25
DDX56-206ENST00000446987 FAM182BQ5T319 152 aa16.64■□□□□ 0.25
DDX56-206ENST00000446987 KDRP35968 1356 aa16.63■□□□□ 0.25
DDX56-206ENST00000446987 PRDM4Q9UKN5 801 aa16.63■□□□□ 0.25
DDX56-206ENST00000446987 CDCA7Q9BWT1 371 aaPredicted RBP16.63■□□□□ 0.25
DDX56-206ENST00000446987 FSD2A1L4K1 749 aa16.62■□□□□ 0.25
DDX56-206ENST00000446987 FAM161AQ3B820 660 aa16.62■□□□□ 0.25
DDX56-206ENST00000446987 AEBP1Q8IUX7 1158 aa16.61■□□□□ 0.25
DDX56-206ENST00000446987 TOGARAM1Q9Y4F4 1720 aa16.61■□□□□ 0.25
DDX56-206ENST00000446987 SOCS7O14512 581 aa16.61■□□□□ 0.25
DDX56-206ENST00000446987 DDB1Q16531 1140 aa16.61■□□□□ 0.25
DDX56-206ENST00000446987 MARCH10Q8NA82 808 aaPredicted RBP16.61■□□□□ 0.25
DDX56-206ENST00000446987 RCAN3Q9UKA8 241 aa16.61■□□□□ 0.25
DDX56-206ENST00000446987 ISY1Q9ULR0 285 aaKnown RBP16.61■□□□□ 0.25
DDX56-206ENST00000446987 RALBP1Q15311 655 aa16.6■□□□□ 0.25
DDX56-206ENST00000446987 PNISRQ8TF01 805 aaKnown RBP16.6■□□□□ 0.25
DDX56-206ENST00000446987 BCL9O00512 1426 aa16.6■□□□□ 0.25
DDX56-206ENST00000446987 DOT1LQ8TEK3 1739 aa16.6■□□□□ 0.25
DDX56-206ENST00000446987 MAP7D2Q96T17 732 aa16.59■□□□□ 0.25
DDX56-206ENST00000446987 NHSQ6T4R5 1651 aa16.59■□□□□ 0.25
DDX56-206ENST00000446987 UPF1Q92900 1129 aaKnown RBP eCLIP16.59■□□□□ 0.25
DDX56-206ENST00000446987 DIAPH1O60610 1272 aaKnown RBP16.58■□□□□ 0.24
DDX56-206ENST00000446987 MYBBP1AQ9BQG0 1328 aaKnown RBP16.57■□□□□ 0.24
DDX56-206ENST00000446987 PLEKHG2Q9H7P9 1386 aa16.57■□□□□ 0.24
DDX56-206ENST00000446987 TERF1P54274 439 aa16.56■□□□□ 0.24
DDX56-206ENST00000446987 EXOC5O00471 708 aa16.56■□□□□ 0.24
DDX56-206ENST00000446987 RAPGEF4Q8WZA2 1011 aa16.56■□□□□ 0.24
DDX56-206ENST00000446987 GOLGA6L3A6NEY3 463 aa16.55■□□□□ 0.24
DDX56-206ENST00000446987 TATP17735 454 aaPredicted RBP16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms