RNA–Protein interactions for RNA: ENST00000440556.1

LINC02048-201, Transcript of long intergenic non-protein coding RNA 2048, humanhuman

TSL 5 BASIC

Gene LINC02048, Length 1,771 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02048-201ENST00000440556 SMTNL1A8MU46 457 aa16.59■□□□□ 0.25
LINC02048-201ENST00000440556 IRX5P78411 483 aaPredicted RBP16.59■□□□□ 0.25
LINC02048-201ENST00000440556 TTC22Q5TAA0 569 aa16.59■□□□□ 0.25
LINC02048-201ENST00000440556 TTC12Q9H892 705 aaPredicted RBP16.59■□□□□ 0.25
LINC02048-201ENST00000440556 KIF24Q5T7B8 1368 aa16.59■□□□□ 0.25
LINC02048-201ENST00000440556 ZGPATQ8N5A5 531 aaKnown RBP16.59■□□□□ 0.25
LINC02048-201ENST00000440556 TMEM87AQ8NBN3 555 aa16.59■□□□□ 0.25
LINC02048-201ENST00000440556 TSR2Q969E8 191 aaKnown RBP16.59■□□□□ 0.25
LINC02048-201ENST00000440556 ZNF830Q96NB3 372 aaPredicted RBP16.59■□□□□ 0.25
LINC02048-201ENST00000440556 RAPGEF3O95398 923 aa16.58■□□□□ 0.24
LINC02048-201ENST00000440556 MTHFSP49914 203 aa16.58■□□□□ 0.24
LINC02048-201ENST00000440556 PAXBP1Q9Y5B6 917 aa16.58■□□□□ 0.24
LINC02048-201ENST00000440556 U2AF1L5P0DN76 240 aaPredicted RBP16.57■□□□□ 0.24
LINC02048-201ENST00000440556 KCNJ4P48050 445 aa16.57■□□□□ 0.24
LINC02048-201ENST00000440556 U2AF1Q01081 240 aaKnown RBP eCLIP16.57■□□□□ 0.24
LINC02048-201ENST00000440556 CUL4AQ13619 759 aa16.57■□□□□ 0.24
LINC02048-201ENST00000440556 TERF2Q15554 542 aa16.57■□□□□ 0.24
LINC02048-201ENST00000440556 PTCH1Q13635 1447 aa16.57■□□□□ 0.24
LINC02048-201ENST00000440556 NCBP1Q09161 790 aaKnown RBP16.56■□□□□ 0.24
LINC02048-201ENST00000440556 PLEKHM2Q8IWE5 1019 aa16.56■□□□□ 0.24
LINC02048-201ENST00000440556 KRT222Q8N1A0 295 aa16.56■□□□□ 0.24
LINC02048-201ENST00000440556 SPAG9O60271 1321 aaKnown RBP16.56■□□□□ 0.24
LINC02048-201ENST00000440556 GSPT1P15170 499 aaKnown RBP16.56■□□□□ 0.24
LINC02048-201ENST00000440556 MX1P20591 662 aa16.56■□□□□ 0.24
LINC02048-201ENST00000440556 TMPOP42166 694 aaKnown RBP16.56■□□□□ 0.24
LINC02048-201ENST00000440556 ZC3H13Q5T200 1668 aaKnown RBP16.56■□□□□ 0.24
LINC02048-201ENST00000440556 TULP2O00295 520 aa16.55■□□□□ 0.24
LINC02048-201ENST00000440556 PUS7Q96PZ0 661 aaKnown RBP16.55■□□□□ 0.24
LINC02048-201ENST00000440556 ATP7AQ04656 1500 aa16.55■□□□□ 0.24
LINC02048-201ENST00000440556 SETBP1Q9Y6X0 1596 aa16.54■□□□□ 0.24
LINC02048-201ENST00000440556 TRIM35Q9UPQ4 493 aa16.54■□□□□ 0.24
LINC02048-201ENST00000440556 WDR33Q9C0J8 1336 aaKnown RBP16.54■□□□□ 0.24
LINC02048-201ENST00000440556 FAM177BA6PVY3 158 aa16.53■□□□□ 0.24
LINC02048-201ENST00000440556 KIF18AQ8NI77 898 aa16.53■□□□□ 0.24
LINC02048-201ENST00000440556 PLEKHF1Q96S99 279 aa16.53■□□□□ 0.24
LINC02048-201ENST00000440556 ERC2O15083 957 aa16.52■□□□□ 0.24
LINC02048-201ENST00000440556 TMX3Q96JJ7 454 aa16.52■□□□□ 0.24
LINC02048-201ENST00000440556 DCTPP1Q9H773 170 aa16.52■□□□□ 0.24
LINC02048-201ENST00000440556 KIF1BO60333 1816 aa16.52■□□□□ 0.24
LINC02048-201ENST00000440556 LMTK2Q8IWU2 1503 aa16.52■□□□□ 0.23
LINC02048-201ENST00000440556 FAM53CQ9NYF3 392 aa16.51■□□□□ 0.23
LINC02048-201ENST00000440556 NEO1Q92859 1461 aa16.51■□□□□ 0.23
LINC02048-201ENST00000440556 ANAPC15P60006 121 aa16.51■□□□□ 0.23
LINC02048-201ENST00000440556 C17orf53Q8N3J3 647 aaPredicted RBP16.51■□□□□ 0.23
LINC02048-201ENST00000440556 ZNF397Q8NF99 534 aaPredicted RBP16.51■□□□□ 0.23
LINC02048-201ENST00000440556 IFT172Q9UG01 1749 aa16.51■□□□□ 0.23
LINC02048-201ENST00000440556 VGLL3A8MV65 326 aa16.5■□□□□ 0.23
LINC02048-201ENST00000440556 IGSF3O75054 1194 aa16.5■□□□□ 0.23
LINC02048-201ENST00000440556 MCCP23508 829 aa16.5■□□□□ 0.23
LINC02048-201ENST00000440556 RNF20Q5VTR2 975 aa16.5■□□□□ 0.23
LINC02048-201ENST00000440556 USP48Q86UV5 1035 aa16.5■□□□□ 0.23
LINC02048-201ENST00000440556 ABCC4O15439 1325 aa16.5■□□□□ 0.23
LINC02048-201ENST00000440556 UBE2HP62256 183 aa16.49■□□□□ 0.23
LINC02048-201ENST00000440556 SIRT2Q8IXJ6 389 aa16.49■□□□□ 0.23
LINC02048-201ENST00000440556 KCNF1Q9H3M0 494 aa16.49■□□□□ 0.23
LINC02048-201ENST00000440556 ZBTB7CA1YPR0 619 aa16.49■□□□□ 0.23
LINC02048-201ENST00000440556 SLFNL1Q499Z3 407 aa16.49■□□□□ 0.23
LINC02048-201ENST00000440556 CCDC112Q8NEF3 446 aa16.49■□□□□ 0.23
LINC02048-201ENST00000440556 IL17RAQ96F46 866 aa16.49■□□□□ 0.23
LINC02048-201ENST00000440556 PYCARDQ9ULZ3 195 aa16.49■□□□□ 0.23
LINC02048-201ENST00000440556 QRICH2Q9H0J4 1663 aa16.48■□□□□ 0.23
LINC02048-201ENST00000440556 MRPL50Q8N5N7 158 aaKnown RBP16.48■□□□□ 0.23
LINC02048-201ENST00000440556 POGZQ7Z3K3 1410 aa16.47■□□□□ 0.23
LINC02048-201ENST00000440556 HCLS1P14317 486 aaPredicted RBP16.47■□□□□ 0.23
LINC02048-201ENST00000440556 API5Q9BZZ5 524 aaKnown RBP16.47■□□□□ 0.23
LINC02048-201ENST00000440556 EFCAB6Q5THR3 1501 aa16.47■□□□□ 0.23
LINC02048-201ENST00000440556 NRXN1Q9ULB1 1477 aa16.47■□□□□ 0.23
LINC02048-201ENST00000440556 RTL1A6NKG5 1358 aa16.47■□□□□ 0.23
LINC02048-201ENST00000440556 NEK4P51957 841 aa16.46■□□□□ 0.23
LINC02048-201ENST00000440556 IRX3P78415 501 aaPredicted RBP16.46■□□□□ 0.23
LINC02048-201ENST00000440556 FUCA2Q9BTY2 467 aa16.46■□□□□ 0.23
LINC02048-201ENST00000440556 ATP6V1DQ9Y5K8 247 aa16.46■□□□□ 0.23
LINC02048-201ENST00000440556 EPB41L2O43491 1005 aaKnown RBP16.46■□□□□ 0.22
LINC02048-201ENST00000440556 SDSP20132 328 aa16.46■□□□□ 0.22
LINC02048-201ENST00000440556 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.46■□□□□ 0.22
LINC02048-201ENST00000440556 EFCC1Q9HA90 598 aa16.46■□□□□ 0.22
LINC02048-201ENST00000440556 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.46■□□□□ 0.22
LINC02048-201ENST00000440556 GADD45BO75293 160 aaPredicted RBP16.45■□□□□ 0.22
LINC02048-201ENST00000440556 RPAP1Q9BWH6 1393 aaPredicted RBP16.45■□□□□ 0.22
LINC02048-201ENST00000440556 ZBTB22O15209 634 aa16.44■□□□□ 0.22
LINC02048-201ENST00000440556 RPAP2Q8IXW5 612 aaPredicted RBP16.44■□□□□ 0.22
LINC02048-201ENST00000440556 COL3A1P02461 1466 aaPredicted RBP16.44■□□□□ 0.22
LINC02048-201ENST00000440556 SSH2Q76I76 1423 aa16.44■□□□□ 0.22
LINC02048-201ENST00000440556 MPNDQ8N594 471 aa16.43■□□□□ 0.22
LINC02048-201ENST00000440556 RGS12O14924 1447 aa16.43■□□□□ 0.22
LINC02048-201ENST00000440556 FRMPD1Q5SYB0 1578 aa16.43■□□□□ 0.22
LINC02048-201ENST00000440556 ANKRD26Q9UPS8 1709 aa16.43■□□□□ 0.22
LINC02048-201ENST00000440556 CCDC192P0DO97 292 aa16.43■□□□□ 0.22
LINC02048-201ENST00000440556 TNNT1P13805 278 aa16.43■□□□□ 0.22
LINC02048-201ENST00000440556 CFAP70Q5T0N1 1121 aa16.43■□□□□ 0.22
LINC02048-201ENST00000440556 FOXD4L5Q5VV16 416 aaPredicted RBP16.43■□□□□ 0.22
LINC02048-201ENST00000440556 FOXD4L4Q8WXT5 416 aaPredicted RBP16.43■□□□□ 0.22
LINC02048-201ENST00000440556 FAM135BQ49AJ0 1406 aa16.42■□□□□ 0.22
LINC02048-201ENST00000440556 YY1AP1Q9H869 796 aa16.42■□□□□ 0.22
LINC02048-201ENST00000440556 TCHHQ07283 1943 aa16.42■□□□□ 0.22
LINC02048-201ENST00000440556 CCDC171Q6TFL3 1326 aa16.42■□□□□ 0.22
LINC02048-201ENST00000440556 CHAMP1Q96JM3 812 aa16.41■□□□□ 0.22
LINC02048-201ENST00000440556 OSBPL3Q9H4L5 887 aa16.41■□□□□ 0.22
LINC02048-201ENST00000440556 C1orf115Q9H7X2 142 aa16.41■□□□□ 0.22
LINC02048-201ENST00000440556 MROH1Q8NDA8 1641 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms