RNA–Protein interactions for RNA: ENST00000433165.6

CNKSR3-202, Transcript of CNKSR family member 3, humanhuman

TSL 1 (best)

Gene CNKSR3, Length 2,347 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3-202ENST00000433165 A0A0G2JS52 829 aa9.77□□□□□ -0.85
CNKSR3-202ENST00000433165 ZC3H6P61129 1189 aaKnown RBP9.77□□□□□ -0.85
CNKSR3-202ENST00000433165 BARGINQ6ZT62 677 aa9.77□□□□□ -0.85
CNKSR3-202ENST00000433165 SLKQ9H2G2 1235 aaPredicted RBP9.77□□□□□ -0.85
CNKSR3-202ENST00000433165 ANKRD36BQ8N2N9 1353 aa9.76□□□□□ -0.85
CNKSR3-202ENST00000433165 ESPNB1AK53 854 aa9.76□□□□□ -0.85
CNKSR3-202ENST00000433165 NUTM2GQ5VZR2 741 aa9.76□□□□□ -0.85
CNKSR3-202ENST00000433165 KRT27Q7Z3Y8 459 aa9.76□□□□□ -0.85
CNKSR3-202ENST00000433165 TESK2Q96S53 571 aa9.76□□□□□ -0.85
CNKSR3-202ENST00000433165 CDCA7Q9BWT1 371 aaPredicted RBP9.76□□□□□ -0.85
CNKSR3-202ENST00000433165 SPATA31A1Q5TZJ5 1347 aa9.76□□□□□ -0.85
CNKSR3-202ENST00000433165 ZNF521Q96K83 1311 aa9.76□□□□□ -0.85
CNKSR3-202ENST00000433165 MCM4P33991 863 aa9.76□□□□□ -0.85
CNKSR3-202ENST00000433165 CALD1Q05682 793 aaKnown RBP9.76□□□□□ -0.85
CNKSR3-202ENST00000433165 CRB1P82279 1406 aa9.75□□□□□ -0.85
CNKSR3-202ENST00000433165 MAPK8IP3Q9UPT6 1336 aa9.75□□□□□ -0.85
CNKSR3-202ENST00000433165 COL5A2P05997 1499 aaPredicted RBP9.75□□□□□ -0.85
CNKSR3-202ENST00000433165 CD163L1Q9NR16 1453 aa9.75□□□□□ -0.85
CNKSR3-202ENST00000433165 STRN4Q9NRL3 753 aa9.74□□□□□ -0.85
CNKSR3-202ENST00000433165 RGPD1P0DJD0 1748 aa9.74□□□□□ -0.85
CNKSR3-202ENST00000433165 A0A1W2PP64 1363 aa9.74□□□□□ -0.85
CNKSR3-202ENST00000433165 ERBB4Q15303 1308 aa9.74□□□□□ -0.85
CNKSR3-202ENST00000433165 SEC24BO95487 1268 aa9.74□□□□□ -0.85
CNKSR3-202ENST00000433165 CHRNA2Q15822 529 aa9.74□□□□□ -0.85
CNKSR3-202ENST00000433165 TCP11L2Q8N4U5 519 aa9.74□□□□□ -0.85
CNKSR3-202ENST00000433165 BRWD3Q6RI45 1802 aa9.74□□□□□ -0.85
CNKSR3-202ENST00000433165 CAMTA1Q9Y6Y1 1673 aa9.74□□□□□ -0.85
CNKSR3-202ENST00000433165 FAM98CQ17RN3 349 aaKnown RBP9.73□□□□□ -0.85
CNKSR3-202ENST00000433165 NFAT5O94916 1531 aa9.73□□□□□ -0.85
CNKSR3-202ENST00000433165 FAM208AQ9UK61 1670 aaKnown RBP9.73□□□□□ -0.85
CNKSR3-202ENST00000433165 ARHGEF25Q86VW2 580 aa9.73□□□□□ -0.85
CNKSR3-202ENST00000433165 TBC1D32Q96NH3 1257 aa9.73□□□□□ -0.85
CNKSR3-202ENST00000433165 MYH16Q9H6N6 1097 aa9.73□□□□□ -0.85
CNKSR3-202ENST00000433165 PARP4Q9UKK3 1724 aaKnown RBP9.73□□□□□ -0.85
CNKSR3-202ENST00000433165 COG3Q96JB2 828 aa9.72□□□□□ -0.85
CNKSR3-202ENST00000433165 TBC1D2Q9BYX2 928 aa9.72□□□□□ -0.85
CNKSR3-202ENST00000433165 SLC12A5Q9H2X9 1139 aa9.72□□□□□ -0.85
CNKSR3-202ENST00000433165 GRPEL1Q9HAV7 217 aa9.72□□□□□ -0.85
CNKSR3-202ENST00000433165 COL18A1P39060 1754 aa9.72□□□□□ -0.85
CNKSR3-202ENST00000433165 WDR17Q8IZU2 1322 aa9.72□□□□□ -0.85
CNKSR3-202ENST00000433165 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.72□□□□□ -0.85
CNKSR3-202ENST00000433165 PRDM4Q9UKN5 801 aa9.72□□□□□ -0.85
CNKSR3-202ENST00000433165 OVOS2A0A0J9YW53 1432 aa9.72□□□□□ -0.85
CNKSR3-202ENST00000433165 OVOS2Q6IE36 1432 aa9.72□□□□□ -0.85
CNKSR3-202ENST00000433165 WNK3Q9BYP7 1800 aa9.71□□□□□ -0.85
CNKSR3-202ENST00000433165 ZBTB7CA1YPR0 619 aa9.71□□□□□ -0.85
CNKSR3-202ENST00000433165 TRAK2O60296 914 aa9.71□□□□□ -0.85
CNKSR3-202ENST00000433165 FAM196AQ6ZSG2 479 aa9.71□□□□□ -0.85
CNKSR3-202ENST00000433165 TRMT2AQ8IZ69 625 aaKnown RBP9.71□□□□□ -0.85
CNKSR3-202ENST00000433165 KIF20BQ96Q89 1820 aa9.71□□□□□ -0.86
CNKSR3-202ENST00000433165 RTL1A6NKG5 1358 aa9.71□□□□□ -0.86
CNKSR3-202ENST00000433165 CSB-PGBD3P0DP91 1061 aa9.71□□□□□ -0.86
CNKSR3-202ENST00000433165 BAG6P46379 1132 aa9.71□□□□□ -0.86
CNKSR3-202ENST00000433165 GOLGA2Q08379 1002 aa9.71□□□□□ -0.86
CNKSR3-202ENST00000433165 TOM1L2Q6ZVM7 507 aa9.71□□□□□ -0.86
CNKSR3-202ENST00000433165 LTN1O94822 1766 aa9.71□□□□□ -0.86
CNKSR3-202ENST00000433165 IGHDP01880 384 aa9.7□□□□□ -0.86
CNKSR3-202ENST00000433165 ARXQ96QS3 562 aa9.7□□□□□ -0.86
CNKSR3-202ENST00000433165 KIF24Q5T7B8 1368 aa9.7□□□□□ -0.86
CNKSR3-202ENST00000433165 SLFN5Q08AF3 891 aa9.7□□□□□ -0.86
CNKSR3-202ENST00000433165 LARP1Q6PKG0 1096 aaKnown RBP9.7□□□□□ -0.86
CNKSR3-202ENST00000433165 CARD10Q9BWT7 1032 aa9.7□□□□□ -0.86
CNKSR3-202ENST00000433165 CHMP5Q9NZZ3 219 aa9.7□□□□□ -0.86
CNKSR3-202ENST00000433165 ADAMTS8Q9UP79 889 aa9.7□□□□□ -0.86
CNKSR3-202ENST00000433165 TERF1P54274 439 aa9.69□□□□□ -0.86
CNKSR3-202ENST00000433165 NME9Q86XW9 330 aa9.69□□□□□ -0.86
CNKSR3-202ENST00000433165 GZF1Q9H116 711 aaPredicted RBP9.69□□□□□ -0.86
CNKSR3-202ENST00000433165 UPF2Q9HAU5 1272 aaKnown RBP9.69□□□□□ -0.86
CNKSR3-202ENST00000433165 CGNL1Q0VF96 1302 aa9.69□□□□□ -0.86
CNKSR3-202ENST00000433165 ZRANB1Q9UGI0 708 aa9.68□□□□□ -0.86
CNKSR3-202ENST00000433165 DISP2A7MBM2 1401 aa9.68□□□□□ -0.86
CNKSR3-202ENST00000433165 MYOM1P52179 1685 aa9.68□□□□□ -0.86
CNKSR3-202ENST00000433165 DDX11L8A8MPP1 907 aa9.68□□□□□ -0.86
CNKSR3-202ENST00000433165 OVOS2A0A0G2JMS6 1433 aa9.68□□□□□ -0.86
CNKSR3-202ENST00000433165 CC2D1BQ5T0F9 858 aaKnown RBP9.67□□□□□ -0.86
CNKSR3-202ENST00000433165 TRIM44Q96DX7 344 aaPredicted RBP9.67□□□□□ -0.86
CNKSR3-202ENST00000433165 LRRC37A3O60309 1634 aa9.67□□□□□ -0.86
CNKSR3-202ENST00000433165 PDE3AQ14432 1141 aa9.67□□□□□ -0.86
CNKSR3-202ENST00000433165 DDB1Q16531 1140 aa9.67□□□□□ -0.86
CNKSR3-202ENST00000433165 KIAA1211Q6ZU35 1233 aa9.66□□□□□ -0.86
CNKSR3-202ENST00000433165 IP6K1Q92551 441 aa9.66□□□□□ -0.86
CNKSR3-202ENST00000433165 MAP7D2Q96T17 732 aa9.66□□□□□ -0.86
CNKSR3-202ENST00000433165 NSD2O96028 1365 aa9.66□□□□□ -0.86
CNKSR3-202ENST00000433165 BCL9O00512 1426 aa9.66□□□□□ -0.86
CNKSR3-202ENST00000433165 SOX12O15370 315 aa9.66□□□□□ -0.86
CNKSR3-202ENST00000433165 CLUAP1Q96AJ1 413 aa9.66□□□□□ -0.86
CNKSR3-202ENST00000433165 ERBB3P21860 1342 aa9.66□□□□□ -0.86
CNKSR3-202ENST00000433165 RGPD5Q99666 1765 aa9.65□□□□□ -0.86
CNKSR3-202ENST00000433165 AMPHP49418 695 aa9.65□□□□□ -0.86
CNKSR3-202ENST00000433165 TNS1Q9HBL0 1735 aaKnown RBP9.65□□□□□ -0.86
CNKSR3-202ENST00000433165 RGPD3A6NKT7 1758 aaPredicted RBP9.65□□□□□ -0.86
CNKSR3-202ENST00000433165 RGPD4Q7Z3J3 1758 aa9.65□□□□□ -0.86
CNKSR3-202ENST00000433165 ANKRD26Q9UPS8 1709 aa9.65□□□□□ -0.87
CNKSR3-202ENST00000433165 NSD3Q9BZ95 1437 aa9.65□□□□□ -0.87
CNKSR3-202ENST00000433165 OFD1O75665 1012 aa9.65□□□□□ -0.87
CNKSR3-202ENST00000433165 TNS2Q63HR2 1409 aa9.64□□□□□ -0.87
CNKSR3-202ENST00000433165 EXOC5O00471 708 aa9.64□□□□□ -0.87
CNKSR3-202ENST00000433165 RBM10P98175 930 aaKnown RBP9.64□□□□□ -0.87
CNKSR3-202ENST00000433165 AAMPQ13685 434 aa9.64□□□□□ -0.87
CNKSR3-202ENST00000433165 ANKRD24Q8TF21 1146 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms